RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 SLC22A3O75751 556 aa5.21□□□□□ -1.58
SF3B1-210ENST00000482158 PIGNO95427 931 aa5.21□□□□□ -1.58
SF3B1-210ENST00000482158 EEF1B2P24534 225 aaKnown RBP5.21□□□□□ -1.58
SF3B1-210ENST00000482158 CDC25CP30307 473 aa5.21□□□□□ -1.58
SF3B1-210ENST00000482158 CHRNA7P36544 502 aa5.21□□□□□ -1.58
SF3B1-210ENST00000482158 CLDN15P56746 228 aa5.21□□□□□ -1.58
SF3B1-210ENST00000482158 IRX6P78412 446 aaPredicted RBP5.21□□□□□ -1.58
SF3B1-210ENST00000482158 SCARB2Q14108 478 aa5.21□□□□□ -1.58
SF3B1-210ENST00000482158 UGP2Q16851 508 aa5.21□□□□□ -1.58
SF3B1-210ENST00000482158 TCTE1Q5JU00 501 aa5.21□□□□□ -1.58
SF3B1-210ENST00000482158 CYP4A22Q5TCH4 519 aa5.21□□□□□ -1.58
SF3B1-210ENST00000482158 C11orf63Q6NUN7 778 aa5.21□□□□□ -1.58
SF3B1-210ENST00000482158 SLC26A9Q7LBE3 791 aa5.21□□□□□ -1.58
SF3B1-210ENST00000482158 ADCK2Q7Z695 626 aa5.21□□□□□ -1.58
SF3B1-210ENST00000482158 ABI3BPQ7Z7G0 1075 aa5.21□□□□□ -1.58
SF3B1-210ENST00000482158 ANKRD23Q86SG2 305 aa5.21□□□□□ -1.58
SF3B1-210ENST00000482158 TRPT1Q86TN4 253 aaKnown RBP5.21□□□□□ -1.58
SF3B1-210ENST00000482158 LMNTD1Q8N9Z9 388 aa5.21□□□□□ -1.58
SF3B1-210ENST00000482158 PIGBQ92521 554 aa5.21□□□□□ -1.58
SF3B1-210ENST00000482158 ZNF524Q96C55 264 aa5.21□□□□□ -1.58
SF3B1-210ENST00000482158 RMDN2Q96LZ7 410 aa5.21□□□□□ -1.58
SF3B1-210ENST00000482158 INPP4AQ96PE3 977 aaPredicted RBP5.21□□□□□ -1.58
SF3B1-210ENST00000482158 SLC2A11Q9BYW1 496 aa5.21□□□□□ -1.58
SF3B1-210ENST00000482158 BICC1Q9H694 974 aaKnown RBP5.21□□□□□ -1.58
SF3B1-210ENST00000482158 POLLQ9UGP5 575 aa5.21□□□□□ -1.58
SF3B1-210ENST00000482158 WDR83OSQ9Y284 106 aa5.21□□□□□ -1.58
SF3B1-210ENST00000482158 RIPK3Q9Y572 518 aa5.21□□□□□ -1.58
SF3B1-210ENST00000482158 TCF20Q9UGU0 1960 aaKnown RBP5.2□□□□□ -1.58
SF3B1-210ENST00000482158 HEG1Q9ULI3 1381 aa5.2□□□□□ -1.58
SF3B1-210ENST00000482158 A0A087WV48 116 aa5.2□□□□□ -1.58
SF3B1-210ENST00000482158 PLOD2O00469 737 aa5.2□□□□□ -1.58
SF3B1-210ENST00000482158 CIDEAO60543 219 aa5.2□□□□□ -1.58
SF3B1-210ENST00000482158 PRKRAO75569 313 aaKnown RBP5.2□□□□□ -1.58
SF3B1-210ENST00000482158 ZNF432O94892 652 aa5.2□□□□□ -1.58
SF3B1-210ENST00000482158 UMODP07911 640 aa5.2□□□□□ -1.58
SF3B1-210ENST00000482158 SAGP10523 405 aaPredicted RBP5.2□□□□□ -1.58
SF3B1-210ENST00000482158 EPCAMP16422 314 aa5.2□□□□□ -1.58
SF3B1-210ENST00000482158 ITGB6P18564 788 aa5.2□□□□□ -1.58
SF3B1-210ENST00000482158 EFNA1P20827 205 aaPredicted RBP5.2□□□□□ -1.58
SF3B1-210ENST00000482158 MNDAP41218 407 aa5.2□□□□□ -1.58
SF3B1-210ENST00000482158 TAF10Q12962 218 aa5.2□□□□□ -1.58
SF3B1-210ENST00000482158 XKR3Q5GH77 459 aa5.2□□□□□ -1.58
SF3B1-210ENST00000482158 HECTD3Q5T447 861 aa5.2□□□□□ -1.58
SF3B1-210ENST00000482158 CAVIN1Q6NZI2 390 aaKnown RBP5.2□□□□□ -1.58
SF3B1-210ENST00000482158 RBMS3Q6XE24 437 aaKnown RBP5.2□□□□□ -1.58
SF3B1-210ENST00000482158 MFSD6Q6ZSS7 791 aa5.2□□□□□ -1.58
SF3B1-210ENST00000482158 NR2C2APQ86WQ0 139 aa5.2□□□□□ -1.58
SF3B1-210ENST00000482158 ZNF383Q8NA42 475 aa5.2□□□□□ -1.58
SF3B1-210ENST00000482158 VANGL1Q8TAA9 524 aaPredicted RBP5.2□□□□□ -1.58
SF3B1-210ENST00000482158 SPATA33Q96N06 139 aa5.2□□□□□ -1.58
SF3B1-210ENST00000482158 EGFL8Q99944 293 aa5.2□□□□□ -1.58
SF3B1-210ENST00000482158 PFDN4Q9NQP4 134 aa5.2□□□□□ -1.58
SF3B1-210ENST00000482158 CACNG4Q9UBN1 327 aa5.2□□□□□ -1.58
SF3B1-210ENST00000482158 ICAM5Q9UMF0 924 aa5.2□□□□□ -1.58
SF3B1-210ENST00000482158 CASTOR2A6NHX0 329 aa5.19□□□□□ -1.58
SF3B1-210ENST00000482158 ERVV-2B6SEH9 535 aa5.19□□□□□ -1.58
SF3B1-210ENST00000482158 ALDH1L2Q3SY69 923 aa5.19□□□□□ -1.58
SF3B1-210ENST00000482158 CCDC184Q52MB2 194 aa5.19□□□□□ -1.58
SF3B1-210ENST00000482158 MPP7Q5T2T1 576 aa5.19□□□□□ -1.58
SF3B1-210ENST00000482158 DNAJB7Q7Z6W7 309 aaPredicted RBP5.19□□□□□ -1.58
SF3B1-210ENST00000482158 METTL23Q86XA0 190 aa5.19□□□□□ -1.58
SF3B1-210ENST00000482158 MMD2Q8IY49 270 aa5.19□□□□□ -1.58
SF3B1-210ENST00000482158 STPG4Q8N801 248 aa5.19□□□□□ -1.58
SF3B1-210ENST00000482158 TRIM58Q8NG06 486 aa5.19□□□□□ -1.58
SF3B1-210ENST00000482158 LRRC8CQ8TDW0 803 aa5.19□□□□□ -1.58
SF3B1-210ENST00000482158 PHLDA1Q8WV24 401 aaPredicted RBP5.19□□□□□ -1.58
SF3B1-210ENST00000482158 TM9SF4Q92544 642 aa5.19□□□□□ -1.58
SF3B1-210ENST00000482158 PGLYRP2Q96PD5 576 aa5.19□□□□□ -1.58
SF3B1-210ENST00000482158 ADPGKQ9BRR6 497 aa5.19□□□□□ -1.58
SF3B1-210ENST00000482158 MRGBPQ9NV56 204 aa5.19□□□□□ -1.58
SF3B1-210ENST00000482158 ADPRHL2Q9NX46 363 aa5.19□□□□□ -1.58
SF3B1-210ENST00000482158 SPHK1Q9NYA1 384 aa5.19□□□□□ -1.58
SF3B1-210ENST00000482158 ATP6V0E1O15342 81 aa5.18□□□□□ -1.58
SF3B1-210ENST00000482158 ATP6AP2O75787 350 aa5.18□□□□□ -1.58
SF3B1-210ENST00000482158 SIX3O95343 332 aaPredicted RBP5.18□□□□□ -1.58
SF3B1-210ENST00000482158 GBAP04062 536 aa5.18□□□□□ -1.58
SF3B1-210ENST00000482158 ERVK-10P10266 1014 aa5.18□□□□□ -1.58
SF3B1-210ENST00000482158 PDGFRAP16234 1089 aa5.18□□□□□ -1.58
SF3B1-210ENST00000482158 ADRA2CP18825 462 aa5.18□□□□□ -1.58
SF3B1-210ENST00000482158 CD27P26842 260 aa5.18□□□□□ -1.58
SF3B1-210ENST00000482158 HOXC13P31276 330 aa5.18□□□□□ -1.58
SF3B1-210ENST00000482158 TLX1P31314 330 aaPredicted RBP5.18□□□□□ -1.58
SF3B1-210ENST00000482158 PRKCIP41743 596 aa5.18□□□□□ -1.58
SF3B1-210ENST00000482158 CRKLP46109 303 aaKnown RBP5.18□□□□□ -1.58
SF3B1-210ENST00000482158 GMPSP49915 693 aaPredicted RBP5.18□□□□□ -1.58
SF3B1-210ENST00000482158 PHEXP78562 749 aa5.18□□□□□ -1.58
SF3B1-210ENST00000482158 RBP5P82980 135 aa5.18□□□□□ -1.58
SF3B1-210ENST00000482158 POU5F1Q01860 360 aaKnown RBP5.18□□□□□ -1.58
SF3B1-210ENST00000482158 P2RY6Q15077 328 aa5.18□□□□□ -1.58
SF3B1-210ENST00000482158 NPTX1Q15818 432 aa5.18□□□□□ -1.58
SF3B1-210ENST00000482158 ODF4Q2M2E3 257 aa5.18□□□□□ -1.58
SF3B1-210ENST00000482158 KLHL22Q53GT1 634 aa5.18□□□□□ -1.58
SF3B1-210ENST00000482158 LBHQ53QV2 105 aaPredicted RBP5.18□□□□□ -1.58
SF3B1-210ENST00000482158 SLC35E4Q6ICL7 350 aa5.18□□□□□ -1.58
SF3B1-210ENST00000482158 IL17RELQ6ZVW7 336 aa5.18□□□□□ -1.58
SF3B1-210ENST00000482158 ISCA2Q86U28 154 aa5.18□□□□□ -1.58
SF3B1-210ENST00000482158 RTN4RL2Q86UN3 420 aa5.18□□□□□ -1.58
SF3B1-210ENST00000482158 DCUN1D3Q8IWE4 304 aa5.18□□□□□ -1.58
SF3B1-210ENST00000482158 THOC1Q96FV9 657 aaKnown RBP5.18□□□□□ -1.58
SF3B1-210ENST00000482158 FAM71F1Q96KD3 344 aaPredicted RBP5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms