RNA–Protein interactions for RNA: ENST00000481999.1

CHD3-211, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 2,515 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-211ENST00000481999 NEK5Q6P3R8 708 aa14.09□□□□□ -0.15
CHD3-211ENST00000481999 SLC22A15Q8IZD6 547 aa14.09□□□□□ -0.15
CHD3-211ENST00000481999 BTN2A2Q8WVV5 523 aa14.09□□□□□ -0.15
CHD3-211ENST00000481999 GLYATL1Q969I3 302 aa14.09□□□□□ -0.15
CHD3-211ENST00000481999 RMND5BQ96G75 393 aaPredicted RBP14.09□□□□□ -0.15
CHD3-211ENST00000481999 MUC13Q9H3R2 512 aa14.09□□□□□ -0.15
CHD3-211ENST00000481999 SLC52A3Q9NQ40 469 aa14.09□□□□□ -0.15
CHD3-211ENST00000481999 SLC22A14Q9Y267 594 aa14.09□□□□□ -0.15
CHD3-211ENST00000481999 MUC22E2RYF6 1773 aaPredicted RBP14.09□□□□□ -0.15
CHD3-211ENST00000481999 TRPM6Q9BX84 2022 aa14.09□□□□□ -0.15
CHD3-211ENST00000481999 A0A1W2PP18 115 aa14.08□□□□□ -0.15
CHD3-211ENST00000481999 H3BNH8 94 aa14.08□□□□□ -0.15
CHD3-211ENST00000481999 WNT9AO14904 365 aa14.08□□□□□ -0.15
CHD3-211ENST00000481999 C6P13671 934 aa14.08□□□□□ -0.15
CHD3-211ENST00000481999 ADRB3P13945 408 aa14.08□□□□□ -0.15
CHD3-211ENST00000481999 SEC13P55735 322 aa14.08□□□□□ -0.15
CHD3-211ENST00000481999 KCNK10P57789 538 aa14.08□□□□□ -0.15
CHD3-211ENST00000481999 TMEM115Q12893 351 aaPredicted RBP14.08□□□□□ -0.15
CHD3-211ENST00000481999 RUNX3Q13761 415 aa14.08□□□□□ -0.15
CHD3-211ENST00000481999 TIGD2Q4W5G0 525 aa14.08□□□□□ -0.15
CHD3-211ENST00000481999 TMEM259Q4ZIN3 620 aa14.08□□□□□ -0.15
CHD3-211ENST00000481999 PAGE3Q5JUK9 113 aa14.08□□□□□ -0.15
CHD3-211ENST00000481999 SPPL2CQ8IUH8 684 aa14.08□□□□□ -0.15
CHD3-211ENST00000481999 TRIML2Q8N7C3 387 aa14.08□□□□□ -0.15
CHD3-211ENST00000481999 MFSD2AQ8NA29 543 aa14.08□□□□□ -0.15
CHD3-211ENST00000481999 PLA2G15Q8NCC3 412 aa14.08□□□□□ -0.15
CHD3-211ENST00000481999 ASB11Q8WXH4 323 aa14.08□□□□□ -0.15
CHD3-211ENST00000481999 SERGEFQ9UGK8 458 aa14.08□□□□□ -0.15
CHD3-211ENST00000481999 TMCO1Q9UM00 188 aa14.08□□□□□ -0.15
CHD3-211ENST00000481999 CROCCQ5TZA2 2017 aa14.08□□□□□ -0.16
CHD3-211ENST00000481999 SOCS2O14508 198 aa14.08□□□□□ -0.16
CHD3-211ENST00000481999 LSM1O15116 133 aaKnown RBP14.08□□□□□ -0.16
CHD3-211ENST00000481999 STK16O75716 305 aa14.08□□□□□ -0.16
CHD3-211ENST00000481999 GPIP06744 558 aa14.08□□□□□ -0.16
CHD3-211ENST00000481999 FASP25445 335 aa14.08□□□□□ -0.16
CHD3-211ENST00000481999 HMOX2P30519 316 aa14.08□□□□□ -0.16
CHD3-211ENST00000481999 GDI1P31150 447 aa14.08□□□□□ -0.16
CHD3-211ENST00000481999 PTPN5P54829 565 aa14.08□□□□□ -0.16
CHD3-211ENST00000481999 RCAN2Q14206 197 aa14.08□□□□□ -0.16
CHD3-211ENST00000481999 ERAP2Q6P179 960 aa14.08□□□□□ -0.16
CHD3-211ENST00000481999 RAVER1Q8IY67 606 aaKnown RBP14.08□□□□□ -0.16
CHD3-211ENST00000481999 TRAM1L1Q8N609 369 aa14.08□□□□□ -0.16
CHD3-211ENST00000481999 DDHD1Q8NEL9 900 aa14.08□□□□□ -0.16
CHD3-211ENST00000481999 CLHC1Q8NHS4 586 aa14.08□□□□□ -0.16
CHD3-211ENST00000481999 HM13Q8TCT9 377 aa14.08□□□□□ -0.16
CHD3-211ENST00000481999 TFAP2CQ92754 450 aa14.08□□□□□ -0.16
CHD3-211ENST00000481999 ULK4Q96C45 1275 aa14.08□□□□□ -0.16
CHD3-211ENST00000481999 C19orf43Q9BQ61 176 aa14.08□□□□□ -0.16
CHD3-211ENST00000481999 ZSCAN5AQ9BUG6 496 aa14.08□□□□□ -0.16
CHD3-211ENST00000481999 OR2AG1Q9H205 316 aa14.08□□□□□ -0.16
CHD3-211ENST00000481999 ACTL8Q9H568 366 aa14.08□□□□□ -0.16
CHD3-211ENST00000481999 CAAP1Q9H8G2 361 aa14.08□□□□□ -0.16
CHD3-211ENST00000481999 AGPAT4Q9NRZ5 378 aa14.08□□□□□ -0.16
CHD3-211ENST00000481999 OLAHQ9NV23 265 aa14.08□□□□□ -0.16
CHD3-211ENST00000481999 AIG1Q9NVV5 245 aa14.08□□□□□ -0.16
CHD3-211ENST00000481999 SMOXQ9NWM0 555 aa14.08□□□□□ -0.16
CHD3-211ENST00000481999 EGFL7Q9UHF1 273 aa14.08□□□□□ -0.16
CHD3-211ENST00000481999 POLR3HQ9Y535 204 aaPredicted RBP14.08□□□□□ -0.16
CHD3-211ENST00000481999 NUP214P35658 2090 aaPredicted RBP14.08□□□□□ -0.16
CHD3-211ENST00000481999 K7EPI3 171 aa14.07□□□□□ -0.16
CHD3-211ENST00000481999 WDR47O94967 919 aa14.07□□□□□ -0.16
CHD3-211ENST00000481999 OTCP00480 354 aa14.07□□□□□ -0.16
CHD3-211ENST00000481999 ASLP04424 464 aa14.07□□□□□ -0.16
CHD3-211ENST00000481999 BDKRB1P46663 353 aa14.07□□□□□ -0.16
CHD3-211ENST00000481999 RPL38P63173 70 aaKnown RBP14.07□□□□□ -0.16
CHD3-211ENST00000481999 TUBA4AP68366 448 aa14.07□□□□□ -0.16
CHD3-211ENST00000481999 NFYCQ13952 458 aa14.07□□□□□ -0.16
CHD3-211ENST00000481999 GBX1Q14549 363 aa14.07□□□□□ -0.16
CHD3-211ENST00000481999 ELAVL3Q14576 367 aaKnown RBP14.07□□□□□ -0.16
CHD3-211ENST00000481999 AP5B1Q2VPB7 878 aa14.07□□□□□ -0.16
CHD3-211ENST00000481999 ATP6AP1LQ52LC2 224 aa14.07□□□□□ -0.16
CHD3-211ENST00000481999 RAET1GQ6H3X3 334 aa14.07□□□□□ -0.16
CHD3-211ENST00000481999 SULT1C3Q6IMI6 304 aa14.07□□□□□ -0.16
CHD3-211ENST00000481999 ADNP2Q6IQ32 1131 aa14.07□□□□□ -0.16
CHD3-211ENST00000481999 TMEM220Q6QAJ8 160 aa14.07□□□□□ -0.16
CHD3-211ENST00000481999 PROKR1Q8TCW9 393 aa14.07□□□□□ -0.16
CHD3-211ENST00000481999 WFIKKN2Q8TEU8 576 aa14.07□□□□□ -0.16
CHD3-211ENST00000481999 SLC6A17Q9H1V8 727 aa14.07□□□□□ -0.16
CHD3-211ENST00000481999 PIF1Q9H611 641 aa14.07□□□□□ -0.16
CHD3-211ENST00000481999 C8orf4Q9NR00 106 aa14.07□□□□□ -0.16
CHD3-211ENST00000481999 DKK3Q9UBP4 350 aa14.07□□□□□ -0.16
CHD3-211ENST00000481999 USP22Q9UPT9 525 aa14.07□□□□□ -0.16
CHD3-211ENST00000481999 PCDHA9Q9Y5H5 950 aa14.07□□□□□ -0.16
CHD3-211ENST00000481999 TNPO3Q9Y5L0 923 aaKnown RBP14.07□□□□□ -0.16
CHD3-211ENST00000481999 KNL1Q8NG31 2342 aa14.07□□□□□ -0.16
CHD3-211ENST00000481999 A0A1W2PQ67 120 aa14.07□□□□□ -0.16
CHD3-211ENST00000481999 SAC3D1A6NKF1 404 aa14.07□□□□□ -0.16
CHD3-211ENST00000481999 ARPC2O15144 300 aa14.07□□□□□ -0.16
CHD3-211ENST00000481999 SH3BGRLO75368 114 aa14.07□□□□□ -0.16
CHD3-211ENST00000481999 KAT7O95251 611 aa14.07□□□□□ -0.16
CHD3-211ENST00000481999 PRNPP04156 253 aa14.07□□□□□ -0.16
CHD3-211ENST00000481999 ANXA5P08758 320 aa14.07□□□□□ -0.16
CHD3-211ENST00000481999 EPB42P16452 691 aa14.07□□□□□ -0.16
CHD3-211ENST00000481999 DGKQP52824 942 aa14.07□□□□□ -0.16
CHD3-211ENST00000481999 DCDC1P59894 354 aa14.07□□□□□ -0.16
CHD3-211ENST00000481999 RABL3Q5HYI8 236 aa14.07□□□□□ -0.16
CHD3-211ENST00000481999 CRTC3Q6UUV7 619 aa14.07□□□□□ -0.16
CHD3-211ENST00000481999 CBR4Q8N4T8 237 aa14.07□□□□□ -0.16
CHD3-211ENST00000481999 DNAJB14Q8TBM8 379 aa14.07□□□□□ -0.16
CHD3-211ENST00000481999 OR8D1Q8WZ84 308 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms