RNA–Protein interactions for RNA: ENST00000477288.5

VARS2-209, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 6,054 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-209ENST00000477288 AKAP8O43823 692 aaKnown RBP18.22■□□□□ 0.51
VARS2-209ENST00000477288 SLC51AQ86UW1 340 aa18.22■□□□□ 0.51
VARS2-209ENST00000477288 ZDHHC21Q8IVQ6 265 aa18.22■□□□□ 0.51
VARS2-209ENST00000477288 PGAM4Q8N0Y7 254 aa18.22■□□□□ 0.51
VARS2-209ENST00000477288 ZBED6CLQ96FA7 236 aaPredicted RBP18.22■□□□□ 0.51
VARS2-209ENST00000477288 AIFM2Q9BRQ8 373 aa18.22■□□□□ 0.51
VARS2-209ENST00000477288 CORO1CQ9ULV4 474 aaPredicted RBP18.22■□□□□ 0.51
VARS2-209ENST00000477288 WNT9AO14904 365 aa18.22■□□□□ 0.51
VARS2-209ENST00000477288 GSTT2BP0CG30 244 aa18.22■□□□□ 0.51
VARS2-209ENST00000477288 GNAZP19086 355 aa18.22■□□□□ 0.51
VARS2-209ENST00000477288 PCBP2Q15366 365 aaKnown RBP eCLIP18.22■□□□□ 0.511e-6■■■■□ 26
VARS2-209ENST00000477288 SAMD14Q8IZD0 417 aaPredicted RBP18.22■□□□□ 0.51
VARS2-209ENST00000477288 MKKSQ9NPJ1 570 aaPredicted RBP18.22■□□□□ 0.51
VARS2-209ENST00000477288 SNTG1Q9NSN8 517 aa18.22■□□□□ 0.51
VARS2-209ENST00000477288 CENPMQ9NSP4 180 aa18.22■□□□□ 0.51
VARS2-209ENST00000477288 TELO2Q9Y4R8 837 aa18.22■□□□□ 0.51
VARS2-209ENST00000477288 SCGB1D2O95969 90 aa18.22■□□□□ 0.51
VARS2-209ENST00000477288 RLN2P04090 185 aa18.22■□□□□ 0.51
VARS2-209ENST00000477288 PRPS2P11908 318 aa18.22■□□□□ 0.51
VARS2-209ENST00000477288 ECT2LQ008S8 904 aa18.22■□□□□ 0.51
VARS2-209ENST00000477288 NAPRTQ6XQN6 538 aa18.22■□□□□ 0.51
VARS2-209ENST00000477288 COMMD3Q9UBI1 195 aa18.22■□□□□ 0.51
VARS2-209ENST00000477288 REM1O75628 298 aa18.21■□□□□ 0.51
VARS2-209ENST00000477288 ADH5P11766 374 aa18.21■□□□□ 0.51
VARS2-209ENST00000477288 MAP3K8P41279 467 aa18.21■□□□□ 0.51
VARS2-209ENST00000477288 PDGFRLQ15198 375 aa18.21■□□□□ 0.51
VARS2-209ENST00000477288 ANKRD22Q5VYY1 191 aa18.21■□□□□ 0.51
VARS2-209ENST00000477288 SIPA1Q96FS4 1042 aa18.21■□□□□ 0.51
VARS2-209ENST00000477288 DGAT2Q96PD7 388 aa18.21■□□□□ 0.51
VARS2-209ENST00000477288 NODALQ96S42 347 aa18.21■□□□□ 0.51
VARS2-209ENST00000477288 SERINC1Q9NRX5 453 aa18.21■□□□□ 0.51
VARS2-209ENST00000477288 TAS2R7Q9NYW3 318 aa18.21■□□□□ 0.51
VARS2-209ENST00000477288 PRMT2P55345 433 aa18.21■□□□□ 0.51
VARS2-209ENST00000477288 ARFRP1Q13795 201 aa18.21■□□□□ 0.51
VARS2-209ENST00000477288 FASTKD3Q14CZ7 662 aaKnown RBP18.21■□□□□ 0.51
VARS2-209ENST00000477288 KLHL26Q53HC5 615 aa18.21■□□□□ 0.51
VARS2-209ENST00000477288 FSTL4Q6MZW2 842 aa18.21■□□□□ 0.51
VARS2-209ENST00000477288 DEFB119Q8N690 84 aa18.21■□□□□ 0.51
VARS2-209ENST00000477288 DMRTB1Q96MA1 342 aa18.21■□□□□ 0.51
VARS2-209ENST00000477288 C1orf109Q9NX04 203 aa18.21■□□□□ 0.51
VARS2-209ENST00000477288 MEMO1Q9Y316 297 aa18.21■□□□□ 0.51
VARS2-209ENST00000477288 WNT7AO00755 349 aa18.21■□□□□ 0.51
VARS2-209ENST00000477288 CYP17A1P05093 508 aa18.21■□□□□ 0.51
VARS2-209ENST00000477288 PRKD1Q15139 912 aaPredicted RBP18.21■□□□□ 0.51
VARS2-209ENST00000477288 C1orf189Q5VU69 101 aa18.21■□□□□ 0.51
VARS2-209ENST00000477288 CEP97Q8IW35 865 aa18.21■□□□□ 0.51
VARS2-209ENST00000477288 ZNF781Q8N8C0 355 aa18.21■□□□□ 0.51
VARS2-209ENST00000477288 EIF3KQ9UBQ5 218 aaKnown RBP18.21■□□□□ 0.51
VARS2-209ENST00000477288 RB1P06400 928 aa18.21■□□□□ 0.51
VARS2-209ENST00000477288 HSD11B1P28845 292 aa18.21■□□□□ 0.51
VARS2-209ENST00000477288 CCR8P51685 355 aa18.21■□□□□ 0.51
VARS2-209ENST00000477288 CAPZA1P52907 286 aa18.21■□□□□ 0.51
VARS2-209ENST00000477288 COL9A3Q14050 684 aaPredicted RBP18.21■□□□□ 0.51
VARS2-209ENST00000477288 GXYLT1Q4G148 440 aa18.21■□□□□ 0.51
VARS2-209ENST00000477288 DHX33Q9H6R0 707 aaKnown RBP18.21■□□□□ 0.51
VARS2-209ENST00000477288 TCRBV7S2A1N4TA0A589 114 aa18.2■□□□□ 0.5
VARS2-209ENST00000477288 NRP1O14786 923 aa18.2■□□□□ 0.5
VARS2-209ENST00000477288 ROR2Q01974 943 aaKnown RBP18.2■□□□□ 0.5
VARS2-209ENST00000477288 KLF1Q13351 362 aaPredicted RBP18.2■□□□□ 0.5
VARS2-209ENST00000477288 KIAA1161Q6NSJ0 714 aa18.2■□□□□ 0.5
VARS2-209ENST00000477288 GPR88Q9GZN0 384 aa18.2■□□□□ 0.5
VARS2-209ENST00000477288 SLC6A15Q9H2J7 730 aa18.2■□□□□ 0.5
VARS2-209ENST00000477288 GDAP2Q9NXN4 497 aa18.2■□□□□ 0.5
VARS2-209ENST00000477288 RAB26Q9ULW5 256 aa18.2■□□□□ 0.5
VARS2-209ENST00000477288 MAN2A2P49641 1150 aa18.2■□□□□ 0.5
VARS2-209ENST00000477288 MTPNP58546 118 aa18.2■□□□□ 0.5
VARS2-209ENST00000477288 HYAL2Q12891 473 aa18.2■□□□□ 0.5
VARS2-209ENST00000477288 CCL14Q16627 93 aa18.2■□□□□ 0.5
VARS2-209ENST00000477288 PRAMEF17Q5VTA0 474 aa18.2■□□□□ 0.5
VARS2-209ENST00000477288 GDPD4Q6W3E5 623 aa18.2■□□□□ 0.5
VARS2-209ENST00000477288 SETD7Q8WTS6 366 aaKnown RBP18.2■□□□□ 0.5
VARS2-209ENST00000477288 RIMKLBQ9ULI2 386 aa18.2■□□□□ 0.5
VARS2-209ENST00000477288 RUVBL1Q9Y265 456 aaKnown RBP18.2■□□□□ 0.5
VARS2-209ENST00000477288 FABP12A6NFH5 140 aa18.2■□□□□ 0.5
VARS2-209ENST00000477288 CSTF1Q05048 431 aaKnown RBP18.2■□□□□ 0.5
VARS2-209ENST00000477288 PRKCDQ05655 676 aa18.2■□□□□ 0.5
VARS2-209ENST00000477288 DNAJB7Q7Z6W7 309 aaPredicted RBP18.2■□□□□ 0.5
VARS2-209ENST00000477288 CLEC4CQ8WTT0 213 aa18.2■□□□□ 0.5
VARS2-209ENST00000477288 FARSBQ9NSD9 589 aaKnown RBP18.2■□□□□ 0.5
VARS2-209ENST00000477288 CDC14AQ9UNH5 594 aa18.2■□□□□ 0.5
VARS2-209ENST00000477288 YJEFN3A6XGL0 299 aa18.2■□□□□ 0.5
VARS2-209ENST00000477288 NOL4O94818 638 aa18.2■□□□□ 0.5
VARS2-209ENST00000477288 BPNT1O95861 308 aa18.2■□□□□ 0.5
VARS2-209ENST00000477288 PITPNAQ00169 270 aa18.2■□□□□ 0.5
VARS2-209ENST00000477288 HNRNPDQ14103 355 aaKnown RBP18.2■□□□□ 0.5
VARS2-209ENST00000477288 CLNKQ7Z7G1 428 aa18.2■□□□□ 0.5
VARS2-209ENST00000477288 RIOK2Q9BVS4 552 aaKnown RBP18.2■□□□□ 0.5
VARS2-209ENST00000477288 ZNF446Q9NWS9 450 aa18.2■□□□□ 0.5
VARS2-209ENST00000477288 WASHC1A8K0Z3 465 aa18.2■□□□□ 0.5
VARS2-209ENST00000477288 WASH3PC4AMC7 463 aa18.2■□□□□ 0.5
VARS2-209ENST00000477288 SLC33A1O00400 549 aaPredicted RBP18.2■□□□□ 0.5
VARS2-209ENST00000477288 GJA1P17302 382 aa18.2■□□□□ 0.5
VARS2-209ENST00000477288 CXCR1P25024 350 aa18.2■□□□□ 0.5
VARS2-209ENST00000477288 MPIP34949 423 aa18.2■□□□□ 0.5
VARS2-209ENST00000477288 FAM174BQ3ZCQ3 159 aa18.2■□□□□ 0.5
VARS2-209ENST00000477288 CLEC12AQ5QGZ9 265 aa18.2■□□□□ 0.5
VARS2-209ENST00000477288 PDE12Q6L8Q7 609 aaKnown RBP18.2■□□□□ 0.5
VARS2-209ENST00000477288 WASH2PQ6VEQ5 465 aa18.2■□□□□ 0.5
VARS2-209ENST00000477288 TMPRSS9Q7Z410 1059 aa18.2■□□□□ 0.5
VARS2-209ENST00000477288 FAM46DQ8NEK8 389 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms