RNA–Protein interactions for RNA: ENST00000477174.1

ACTN4-205, Transcript of actinin alpha 4, humanhuman

TSL 3

Gene ACTN4, Length 544 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-205ENST00000477174 A0A0J9YY10 115 aa12.97□□□□□ -0.33
ACTN4-205ENST00000477174 ISM1B1AKI9 464 aa12.97□□□□□ -0.33
ACTN4-205ENST00000477174 GFYI3L273 518 aa12.97□□□□□ -0.33
ACTN4-205ENST00000477174 PSIP1O75475 530 aaKnown RBP12.97□□□□□ -0.33
ACTN4-205ENST00000477174 KIAA0754O94854 1291 aa12.97□□□□□ -0.33
ACTN4-205ENST00000477174 FKBP9O95302 570 aa12.97□□□□□ -0.33
ACTN4-205ENST00000477174 CATP04040 527 aaKnown RBP12.97□□□□□ -0.33
ACTN4-205ENST00000477174 F7P08709 466 aaPredicted RBP12.97□□□□□ -0.33
ACTN4-205ENST00000477174 CCNYL3P0C7X3 344 aa12.97□□□□□ -0.33
ACTN4-205ENST00000477174 MPC1LP0DKB6 136 aa12.97□□□□□ -0.33
ACTN4-205ENST00000477174 ZNF28P17035 718 aa12.97□□□□□ -0.33
ACTN4-205ENST00000477174 HSD17B2P37059 387 aa12.97□□□□□ -0.33
ACTN4-205ENST00000477174 MGAT5Q09328 741 aa12.97□□□□□ -0.33
ACTN4-205ENST00000477174 ILF2Q12905 390 aaKnown RBP12.97□□□□□ -0.33
ACTN4-205ENST00000477174 ARHGAP19Q14CB8 494 aa12.97□□□□□ -0.33
ACTN4-205ENST00000477174 GPR19Q15760 415 aa12.97□□□□□ -0.33
ACTN4-205ENST00000477174 LRRC8EQ6NSJ5 796 aa12.97□□□□□ -0.33
ACTN4-205ENST00000477174 PWWP2BQ6NUJ5 590 aa12.97□□□□□ -0.33
ACTN4-205ENST00000477174 TRMT10BQ6PF06 316 aaKnown RBP12.97□□□□□ -0.33
ACTN4-205ENST00000477174 CYHR1Q6ZMK1 362 aa12.97□□□□□ -0.33
ACTN4-205ENST00000477174 CYS1Q717R9 158 aa12.97□□□□□ -0.33
ACTN4-205ENST00000477174 VASH2Q86V25 355 aa12.97□□□□□ -0.33
ACTN4-205ENST00000477174 PALM2Q8IXS6 379 aa12.97□□□□□ -0.33
ACTN4-205ENST00000477174 ZBED8Q8IZ13 594 aa12.97□□□□□ -0.33
ACTN4-205ENST00000477174 LINC01555Q8NAE3 123 aa12.97□□□□□ -0.33
ACTN4-205ENST00000477174 FBXO15Q8NCQ5 510 aaPredicted RBP12.97□□□□□ -0.33
ACTN4-205ENST00000477174 MNS1Q8NEH6 495 aa12.97□□□□□ -0.33
ACTN4-205ENST00000477174 OR9A1PQ8NGU1 263 aa12.97□□□□□ -0.33
ACTN4-205ENST00000477174 GIMAP7Q8NHV1 300 aa12.97□□□□□ -0.33
ACTN4-205ENST00000477174 CD200R1Q8TD46 325 aa12.97□□□□□ -0.33
ACTN4-205ENST00000477174 KIAA1143Q96AT1 154 aaPredicted RBP12.97□□□□□ -0.33
ACTN4-205ENST00000477174 SLC30A3Q99726 388 aa12.97□□□□□ -0.33
ACTN4-205ENST00000477174 PHACTR1Q9C0D0 580 aa12.97□□□□□ -0.33
ACTN4-205ENST00000477174 ZFATQ9P243 1243 aa12.97□□□□□ -0.33
ACTN4-205ENST00000477174 PADI1Q9ULC6 663 aa12.97□□□□□ -0.33
ACTN4-205ENST00000477174 MYO1CO00159 1063 aa12.96□□□□□ -0.33
ACTN4-205ENST00000477174 ZBTB14O43829 449 aa12.96□□□□□ -0.33
ACTN4-205ENST00000477174 PRICKLE3O43900 615 aaPredicted RBP12.96□□□□□ -0.33
ACTN4-205ENST00000477174 PVRP15151 417 aa12.96□□□□□ -0.33
ACTN4-205ENST00000477174 STAT5AP42229 794 aa12.96□□□□□ -0.33
ACTN4-205ENST00000477174 RGS4P49798 205 aa12.96□□□□□ -0.33
ACTN4-205ENST00000477174 PLTPP55058 493 aa12.96□□□□□ -0.33
ACTN4-205ENST00000477174 TIAL1Q01085 375 aaKnown RBP eCLIP12.96□□□□□ -0.33
ACTN4-205ENST00000477174 RHDQ02161 417 aa12.96□□□□□ -0.33
ACTN4-205ENST00000477174 FASTKD3Q14CZ7 662 aaKnown RBP12.96□□□□□ -0.33
ACTN4-205ENST00000477174 SF1Q15637 639 aaKnown RBP12.96□□□□□ -0.33
ACTN4-205ENST00000477174 CYP2A13Q16696 494 aa12.96□□□□□ -0.33
ACTN4-205ENST00000477174 CCSMST1Q4G0I0 132 aa12.96□□□□□ -0.33
ACTN4-205ENST00000477174 CDHR3Q6ZTQ4 885 aa12.96□□□□□ -0.33
ACTN4-205ENST00000477174 TRIM73Q86UV7 250 aa12.96□□□□□ -0.33
ACTN4-205ENST00000477174 C19orf47Q8N9M1 422 aaKnown RBP12.96□□□□□ -0.33
ACTN4-205ENST00000477174 GALNT6Q8NCL4 622 aa12.96□□□□□ -0.33
ACTN4-205ENST00000477174 KIF18AQ8NI77 898 aa12.96□□□□□ -0.33
ACTN4-205ENST00000477174 ZUFSPQ96AP4 578 aa12.96□□□□□ -0.33
ACTN4-205ENST00000477174 IL17FQ96PD4 163 aa12.96□□□□□ -0.33
ACTN4-205ENST00000477174 LRRC1Q9BTT6 524 aa12.96□□□□□ -0.33
ACTN4-205ENST00000477174 KLHL25Q9H0H3 589 aa12.96□□□□□ -0.33
ACTN4-205ENST00000477174 INTS7Q9NVH2 962 aaKnown RBP12.96□□□□□ -0.33
ACTN4-205ENST00000477174 NSMCE4AQ9NXX6 385 aa12.96□□□□□ -0.33
ACTN4-205ENST00000477174 SPATA7Q9P0W8 599 aa12.96□□□□□ -0.33
ACTN4-205ENST00000477174 CIDEBQ9UHD4 219 aa12.96□□□□□ -0.33
ACTN4-205ENST00000477174 TRMT6Q9UJA5 497 aaKnown RBP12.96□□□□□ -0.33
ACTN4-205ENST00000477174 RUVBL2Q9Y230 463 aaKnown RBP12.96□□□□□ -0.33
ACTN4-205ENST00000477174 VWA7Q9Y334 891 aa12.96□□□□□ -0.33
ACTN4-205ENST00000477174 PCDHB3Q9Y5E6 796 aa12.96□□□□□ -0.33
ACTN4-205ENST00000477174 LOC400499M0QZD8 3231 aa12.96□□□□□ -0.33
ACTN4-205ENST00000477174 SDK2Q58EX2 2172 aa12.96□□□□□ -0.34
ACTN4-205ENST00000477174 ZNF839A8K0R7 811 aa12.95□□□□□ -0.34
ACTN4-205ENST00000477174 ARHGEF33A8MVX0 844 aa12.95□□□□□ -0.34
ACTN4-205ENST00000477174 TARM1B6A8C7 271 aa12.95□□□□□ -0.34
ACTN4-205ENST00000477174 SCRG1O75711 98 aa12.95□□□□□ -0.34
ACTN4-205ENST00000477174 TIAF1O95411 115 aa12.95□□□□□ -0.34
ACTN4-205ENST00000477174 GSTA2P09210 222 aa12.95□□□□□ -0.34
ACTN4-205ENST00000477174 LIFP15018 202 aa12.95□□□□□ -0.34
ACTN4-205ENST00000477174 MCM3P25205 808 aa12.95□□□□□ -0.34
ACTN4-205ENST00000477174 OAS2P29728 719 aaKnown RBP12.95□□□□□ -0.34
ACTN4-205ENST00000477174 PEBP1P30086 187 aaKnown RBP12.95□□□□□ -0.34
ACTN4-205ENST00000477174 BDKRB1P46663 353 aa12.95□□□□□ -0.34
ACTN4-205ENST00000477174 CDKN2DP55273 166 aa12.95□□□□□ -0.34
ACTN4-205ENST00000477174 SRSF6Q13247 344 aaKnown RBP12.95□□□□□ -0.34
ACTN4-205ENST00000477174 CUL1Q13616 776 aa12.95□□□□□ -0.34
ACTN4-205ENST00000477174 ZIC1Q15915 447 aa12.95□□□□□ -0.34
ACTN4-205ENST00000477174 C8orf74Q6P047 294 aa12.95□□□□□ -0.34
ACTN4-205ENST00000477174 C3orf62Q6ZUJ4 267 aa12.95□□□□□ -0.34
ACTN4-205ENST00000477174 SLC26A11Q86WA9 606 aa12.95□□□□□ -0.34
ACTN4-205ENST00000477174 TMEM126BQ8IUX1 230 aa12.95□□□□□ -0.34
ACTN4-205ENST00000477174 MMGT1Q8N4V1 131 aa12.95□□□□□ -0.34
ACTN4-205ENST00000477174 DNAJC22Q8N4W6 341 aa12.95□□□□□ -0.34
ACTN4-205ENST00000477174 C2orf73Q8N5S3 287 aaPredicted RBP12.95□□□□□ -0.34
ACTN4-205ENST00000477174 LMNTD1Q8N9Z9 388 aa12.95□□□□□ -0.34
ACTN4-205ENST00000477174 LSM14AQ8ND56 463 aaKnown RBP12.95□□□□□ -0.34
ACTN4-205ENST00000477174 FBXO25Q8TCJ0 367 aa12.95□□□□□ -0.34
ACTN4-205ENST00000477174 DENND1AQ8TEH3 1009 aa12.95□□□□□ -0.34
ACTN4-205ENST00000477174 SEC14L1Q92503 715 aa12.95□□□□□ -0.34
ACTN4-205ENST00000477174 N4BP2L2Q92802 583 aaPredicted RBP12.95□□□□□ -0.34
ACTN4-205ENST00000477174 SLC45A3Q96JT2 553 aa12.95□□□□□ -0.34
ACTN4-205ENST00000477174 LRFN5Q96NI6 719 aa12.95□□□□□ -0.34
ACTN4-205ENST00000477174 NDNQ99608 321 aa12.95□□□□□ -0.34
ACTN4-205ENST00000477174 GPN2Q9H9Y4 310 aaPredicted RBP12.95□□□□□ -0.34
ACTN4-205ENST00000477174 FAM60AQ9NP50 221 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms