RNA–Protein interactions for RNA: ENST00000476590.1

CD55-208, Transcript of CD55 molecule (Cromer blood group), human

TSL 1 (best)

Gene CD55, Length 2,163 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CD55-208	ENST00000476590	NLRC3	Q7RTR2	1065 aa		4.07	□□□□□ -1.76
CD55-208	ENST00000476590	PAGE2	Q7Z2X7	111 aa		4.07	□□□□□ -1.76
CD55-208	ENST00000476590	ADAT2	Q7Z6V5	191 aa	Known RBP	4.07	□□□□□ -1.76
CD55-208	ENST00000476590	RASAL3	Q86YV0	1011 aa		4.07	□□□□□ -1.76
CD55-208	ENST00000476590	RNF113B	Q8IZP6	322 aa	Known RBP	4.07	□□□□□ -1.76
CD55-208	ENST00000476590	THEM5	Q8N1Q8	247 aa		4.07	□□□□□ -1.76
CD55-208	ENST00000476590	ARL14	Q8N4G2	192 aa		4.07	□□□□□ -1.76
CD55-208	ENST00000476590	TMEM199	Q8N511	208 aa		4.07	□□□□□ -1.76
CD55-208	ENST00000476590	OR2C3	Q8N628	320 aa		4.07	□□□□□ -1.76
CD55-208	ENST00000476590	CHDH	Q8NE62	594 aa	Predicted RBP	4.07	□□□□□ -1.76
CD55-208	ENST00000476590	FAM83F	Q8NEG4	500 aa	Predicted RBP	4.07	□□□□□ -1.76
CD55-208	ENST00000476590	BHLHE22	Q8NFJ8	381 aa	Predicted RBP	4.07	□□□□□ -1.76
CD55-208	ENST00000476590	OR56B2P	Q8NGI1	322 aa		4.07	□□□□□ -1.76
CD55-208	ENST00000476590	OR13J1	Q8NGT2	312 aa		4.07	□□□□□ -1.76
CD55-208	ENST00000476590	PPP1R35	Q8TAP8	253 aa		4.07	□□□□□ -1.76
CD55-208	ENST00000476590	DYNC2LI1	Q8TCX1	351 aa		4.07	□□□□□ -1.76
CD55-208	ENST00000476590	NR4A3	Q92570	626 aa		4.07	□□□□□ -1.76
CD55-208	ENST00000476590	FAM122A	Q96E09	287 aa		4.07	□□□□□ -1.76
CD55-208	ENST00000476590	GPR137	Q96N19	417 aa		4.07	□□□□□ -1.76
CD55-208	ENST00000476590	LINC00052	Q96N35	136 aa		4.07	□□□□□ -1.76
CD55-208	ENST00000476590	CCNL2	Q96S94	520 aa	Predicted RBP	4.07	□□□□□ -1.76
CD55-208	ENST00000476590	WDR77	Q9BQA1	342 aa	Predicted RBP	4.07	□□□□□ -1.76
CD55-208	ENST00000476590	RTKN	Q9BST9	563 aa		4.07	□□□□□ -1.76
CD55-208	ENST00000476590	C1QTNF1	Q9BXJ1	281 aa		4.07	□□□□□ -1.76
CD55-208	ENST00000476590	CPEB1	Q9BZB8	566 aa	Known RBP	4.07	□□□□□ -1.76
CD55-208	ENST00000476590	XPNPEP1	Q9NQW7	623 aa		4.07	□□□□□ -1.76
CD55-208	ENST00000476590	PRDM5	Q9NQX1	630 aa	Predicted RBP	4.07	□□□□□ -1.76
CD55-208	ENST00000476590	DPP3	Q9NY33	737 aa		4.07	□□□□□ -1.76
CD55-208	ENST00000476590	RDH8	Q9NYR8	311 aa		4.07	□□□□□ -1.76
CD55-208	ENST00000476590	SH3BP4	Q9P0V3	963 aa		4.07	□□□□□ -1.76
CD55-208	ENST00000476590	TBC1D29	Q9UFV1	150 aa		4.07	□□□□□ -1.76
CD55-208	ENST00000476590	PURG	Q9UJV8	347 aa	Known RBP	4.07	□□□□□ -1.76
CD55-208	ENST00000476590	ANAPC2	Q9UJX6	822 aa		4.07	□□□□□ -1.76
CD55-208	ENST00000476590	SPATA31A6	Q5VVP1	1343 aa		4.07	□□□□□ -1.76
CD55-208	ENST00000476590	LTBP3	Q9NS15	1303 aa		4.07	□□□□□ -1.76
CD55-208	ENST00000476590	FAM208A	Q9UK61	1670 aa	Known RBP	4.07	□□□□□ -1.76
CD55-208	ENST00000476590	C1orf167	Q5SNV9	1468 aa		4.06	□□□□□ -1.76
CD55-208	ENST00000476590	NFAT5	O94916	1531 aa		4.06	□□□□□ -1.76
CD55-208	ENST00000476590		A0A087WV62	115 aa		4.06	□□□□□ -1.76
CD55-208	ENST00000476590	SLC22A23	A1A5C7	686 aa		4.06	□□□□□ -1.76
CD55-208	ENST00000476590	DENND3	A2RUS2	1198 aa		4.06	□□□□□ -1.76
CD55-208	ENST00000476590	RHPN2P1	A8MT19	583 aa		4.06	□□□□□ -1.76
CD55-208	ENST00000476590	ADAM12	O43184	909 aa		4.06	□□□□□ -1.76
CD55-208	ENST00000476590	TBC1D4	O60343	1298 aa		4.06	□□□□□ -1.76
CD55-208	ENST00000476590	AOC2	O75106	756 aa		4.06	□□□□□ -1.76
CD55-208	ENST00000476590	ENTPD3	O75355	529 aa		4.06	□□□□□ -1.76
CD55-208	ENST00000476590	AVIL	O75366	819 aa		4.06	□□□□□ -1.76
CD55-208	ENST00000476590	GPX5	O75715	221 aa		4.06	□□□□□ -1.76
CD55-208	ENST00000476590	PTBP3	O95758	552 aa	Known RBP	4.06	□□□□□ -1.76
CD55-208	ENST00000476590	PEX11B	O96011	259 aa		4.06	□□□□□ -1.76
CD55-208	ENST00000476590	PLAT	P00750	562 aa		4.06	□□□□□ -1.76
CD55-208	ENST00000476590	AHSG	P02765	367 aa		4.06	□□□□□ -1.76
CD55-208	ENST00000476590	OPN1MW	P04001	364 aa		4.06	□□□□□ -1.76
CD55-208	ENST00000476590	SERPINF2	P08697	491 aa		4.06	□□□□□ -1.76
CD55-208	ENST00000476590	H2AFZ	P0C0S5	128 aa		4.06	□□□□□ -1.76
CD55-208	ENST00000476590	OPN1MW2	P0DN77	364 aa		4.06	□□□□□ -1.76
CD55-208	ENST00000476590	OPN1MW3	P0DN78	364 aa		4.06	□□□□□ -1.76
CD55-208	ENST00000476590	AR	P10275	920 aa		4.06	□□□□□ -1.76
CD55-208	ENST00000476590	FCGR1A	P12314	374 aa		4.06	□□□□□ -1.76
CD55-208	ENST00000476590	PLS3	P13797	630 aa		4.06	□□□□□ -1.76
CD55-208	ENST00000476590	PFKL	P17858	780 aa		4.06	□□□□□ -1.76
CD55-208	ENST00000476590	MAG	P20916	626 aa		4.06	□□□□□ -1.76
CD55-208	ENST00000476590	BGN	P21810	368 aa		4.06	□□□□□ -1.76
CD55-208	ENST00000476590	FPR3	P25089	353 aa		4.06	□□□□□ -1.76
CD55-208	ENST00000476590	HLA-DMA	P28067	261 aa		4.06	□□□□□ -1.76
CD55-208	ENST00000476590	MAPK4	P31152	587 aa		4.06	□□□□□ -1.76
CD55-208	ENST00000476590	BMI1	P35226	326 aa		4.06	□□□□□ -1.76
CD55-208	ENST00000476590	RORA	P35398	523 aa		4.06	□□□□□ -1.76
CD55-208	ENST00000476590	POLR2I	P36954	125 aa	Known RBP	4.06	□□□□□ -1.76
CD55-208	ENST00000476590	GPR143	P51810	404 aa		4.06	□□□□□ -1.76
CD55-208	ENST00000476590	AQP5	P55064	265 aa		4.06	□□□□□ -1.76
CD55-208	ENST00000476590	PRKCD	Q05655	676 aa		4.06	□□□□□ -1.76
CD55-208	ENST00000476590	TNK2	Q07912	1038 aa		4.06	□□□□□ -1.76
CD55-208	ENST00000476590	FADD	Q13158	208 aa		4.06	□□□□□ -1.76
CD55-208	ENST00000476590	TFDP2	Q14188	446 aa		4.06	□□□□□ -1.76
CD55-208	ENST00000476590	POU4F3	Q15319	338 aa		4.06	□□□□□ -1.76
CD55-208	ENST00000476590	ZNF174	Q15697	407 aa		4.06	□□□□□ -1.76
CD55-208	ENST00000476590	CCDC142	Q17RM4	750 aa		4.06	□□□□□ -1.76
CD55-208	ENST00000476590	COL28A1	Q2UY09	1125 aa		4.06	□□□□□ -1.76
CD55-208	ENST00000476590	KRTAP19-4	Q3LI73	84 aa		4.06	□□□□□ -1.76
CD55-208	ENST00000476590	HSF5	Q4G112	596 aa	Predicted RBP	4.06	□□□□□ -1.76
CD55-208	ENST00000476590	IFIT1B	Q5T764	474 aa	Known RBP	4.06	□□□□□ -1.76
CD55-208	ENST00000476590	C1orf185	Q5T7R7	199 aa		4.06	□□□□□ -1.76
CD55-208	ENST00000476590	IRAK1BP1	Q5VVH5	260 aa		4.06	□□□□□ -1.76
CD55-208	ENST00000476590	PMF1	Q6P1K2	205 aa		4.06	□□□□□ -1.76
CD55-208	ENST00000476590	VIT	Q6UXI7	678 aa		4.06	□□□□□ -1.76
CD55-208	ENST00000476590	H2AFV	Q71UI9	128 aa		4.06	□□□□□ -1.76
CD55-208	ENST00000476590	TRIL	Q7L0X0	811 aa		4.06	□□□□□ -1.76
CD55-208	ENST00000476590	NUP54	Q7Z3B4	507 aa		4.06	□□□□□ -1.76
CD55-208	ENST00000476590	TRMT11	Q7Z4G4	463 aa	Known RBP	4.06	□□□□□ -1.76
CD55-208	ENST00000476590	LRRTM4	Q86VH4	590 aa		4.06	□□□□□ -1.76
CD55-208	ENST00000476590	ANKRD46	Q86W74	232 aa		4.06	□□□□□ -1.76
CD55-208	ENST00000476590	CRLF3	Q8IUI8	442 aa		4.06	□□□□□ -1.76
CD55-208	ENST00000476590	ARID3B	Q8IVW6	561 aa	Predicted RBP	4.06	□□□□□ -1.76
CD55-208	ENST00000476590	ZZZ3	Q8IYH5	903 aa		4.06	□□□□□ -1.76
CD55-208	ENST00000476590	SVOPL	Q8N434	492 aa		4.06	□□□□□ -1.76
CD55-208	ENST00000476590	YIPF7	Q8N8F6	280 aa		4.06	□□□□□ -1.76
CD55-208	ENST00000476590	BANP	Q8N9N5	519 aa		4.06	□□□□□ -1.76
CD55-208	ENST00000476590	FBXO15	Q8NCQ5	510 aa	Predicted RBP	4.06	□□□□□ -1.76
CD55-208	ENST00000476590	TRPV1	Q8NER1	839 aa		4.06	□□□□□ -1.76

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