RNA–Protein interactions for RNA: ENST00000475832.1

MRPL55-227, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-227ENST00000475832 KANK2Q63ZY3 851 aa11.9□□□□□ -0.5
MRPL55-227ENST00000475832 NXNQ6DKJ4 435 aa11.9□□□□□ -0.5
MRPL55-227ENST00000475832 CAPN13Q6MZZ7 669 aaPredicted RBP11.9□□□□□ -0.5
MRPL55-227ENST00000475832 AGTRAPQ6RW13 159 aa11.9□□□□□ -0.5
MRPL55-227ENST00000475832 FAM83HQ6ZRV2 1179 aaPredicted RBP11.9□□□□□ -0.5
MRPL55-227ENST00000475832 IQCHQ86VS3 1027 aa11.9□□□□□ -0.5
MRPL55-227ENST00000475832 HID1Q8IV36 788 aa11.9□□□□□ -0.5
MRPL55-227ENST00000475832 SYTL1Q8IYJ3 562 aa11.9□□□□□ -0.5
MRPL55-227ENST00000475832 FAM160A2Q8N612 972 aaPredicted RBP11.9□□□□□ -0.5
MRPL55-227ENST00000475832 MFSD2AQ8NA29 543 aa11.9□□□□□ -0.5
MRPL55-227ENST00000475832 OR13H1Q8NG92 308 aa11.9□□□□□ -0.5
MRPL55-227ENST00000475832 OR5K2Q8NHB8 316 aa11.9□□□□□ -0.5
MRPL55-227ENST00000475832 METTL6Q8TCB7 284 aa11.9□□□□□ -0.5
MRPL55-227ENST00000475832 OR1E3Q8WZA6 343 aa11.9□□□□□ -0.5
MRPL55-227ENST00000475832 ESAMQ96AP7 390 aa11.9□□□□□ -0.5
MRPL55-227ENST00000475832 MOCOSQ96EN8 888 aa11.9□□□□□ -0.5
MRPL55-227ENST00000475832 MED8Q96G25 268 aa11.9□□□□□ -0.5
MRPL55-227ENST00000475832 C12orf66Q96MD2 445 aa11.9□□□□□ -0.5
MRPL55-227ENST00000475832 NSUN5Q96P11 429 aaKnown RBP11.9□□□□□ -0.5
MRPL55-227ENST00000475832 FERD3LQ96RJ6 166 aa11.9□□□□□ -0.5
MRPL55-227ENST00000475832 TMEM79Q9BSE2 394 aa11.9□□□□□ -0.5
MRPL55-227ENST00000475832 RAB11FIP5Q9BXF6 653 aa11.9□□□□□ -0.5
MRPL55-227ENST00000475832 GSDMCQ9BYG8 508 aa11.9□□□□□ -0.5
MRPL55-227ENST00000475832 NUF2Q9BZD4 464 aa11.9□□□□□ -0.5
MRPL55-227ENST00000475832 ZDHHC5Q9C0B5 715 aa11.9□□□□□ -0.5
MRPL55-227ENST00000475832 MVB12BQ9H7P6 319 aa11.9□□□□□ -0.5
MRPL55-227ENST00000475832 ACTR8Q9H981 624 aa11.9□□□□□ -0.5
MRPL55-227ENST00000475832 KCNK13Q9HB14 408 aa11.9□□□□□ -0.5
MRPL55-227ENST00000475832 MRPL40Q9NQ50 206 aaKnown RBP11.9□□□□□ -0.5
MRPL55-227ENST00000475832 TCF7L2Q9NQB0 619 aa11.9□□□□□ -0.5
MRPL55-227ENST00000475832 TM7SF3Q9NS93 570 aa11.9□□□□□ -0.5
MRPL55-227ENST00000475832 RIC8BQ9NVN3 520 aa11.9□□□□□ -0.5
MRPL55-227ENST00000475832 SPATA7Q9P0W8 599 aa11.9□□□□□ -0.5
MRPL55-227ENST00000475832 STOX2Q9P2F5 926 aaPredicted RBP11.9□□□□□ -0.5
MRPL55-227ENST00000475832 GULP1Q9UBP9 304 aa11.9□□□□□ -0.5
MRPL55-227ENST00000475832 ANGPTL2Q9UKU9 493 aa11.9□□□□□ -0.5
MRPL55-227ENST00000475832 PSMD13Q9UNM6 376 aa11.9□□□□□ -0.5
MRPL55-227ENST00000475832 CA5BQ9Y2D0 317 aa11.9□□□□□ -0.5
MRPL55-227ENST00000475832 DYRK1BQ9Y463 629 aa11.9□□□□□ -0.5
MRPL55-227ENST00000475832 UBFD1O14562 309 aaKnown RBP11.89□□□□□ -0.51
MRPL55-227ENST00000475832 CLDN9O95484 217 aa11.89□□□□□ -0.51
MRPL55-227ENST00000475832 CTSEP14091 401 aa11.89□□□□□ -0.51
MRPL55-227ENST00000475832 HGFP14210 728 aa11.89□□□□□ -0.51
MRPL55-227ENST00000475832 CD38P28907 300 aa11.89□□□□□ -0.51
MRPL55-227ENST00000475832 SERPINB3P29508 390 aa11.89□□□□□ -0.51
MRPL55-227ENST00000475832 SLC6A12P48065 614 aa11.89□□□□□ -0.51
MRPL55-227ENST00000475832 RACK1P63244 317 aaKnown RBP11.89□□□□□ -0.51
MRPL55-227ENST00000475832 SH3BP2P78314 561 aa11.89□□□□□ -0.51
MRPL55-227ENST00000475832 NAE1Q13564 534 aa11.89□□□□□ -0.51
MRPL55-227ENST00000475832 ARHGAP19Q14CB8 494 aa11.89□□□□□ -0.51
MRPL55-227ENST00000475832 PTCHD3Q3KNS1 767 aa11.89□□□□□ -0.51
MRPL55-227ENST00000475832 UAP1L1Q3KQV9 507 aa11.89□□□□□ -0.51
MRPL55-227ENST00000475832 FBXO48Q5FWF7 155 aa11.89□□□□□ -0.51
MRPL55-227ENST00000475832 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.89□□□□□ -0.51
MRPL55-227ENST00000475832 SPDYAQ5MJ70 313 aa11.89□□□□□ -0.51
MRPL55-227ENST00000475832 MBOAT1Q6ZNC8 495 aa11.89□□□□□ -0.51
MRPL55-227ENST00000475832 RPS27LQ71UM5 84 aaKnown RBP11.89□□□□□ -0.51
MRPL55-227ENST00000475832 YTHDF3Q7Z739 585 aaKnown RBP11.89□□□□□ -0.51
MRPL55-227ENST00000475832 MTDHQ86UE4 582 aaKnown RBP11.89□□□□□ -0.51
MRPL55-227ENST00000475832 PARGQ86W56 976 aa11.89□□□□□ -0.51
MRPL55-227ENST00000475832 MYLK4Q86YV6 388 aaPredicted RBP11.89□□□□□ -0.51
MRPL55-227ENST00000475832 DDIASQ8IXT1 998 aa11.89□□□□□ -0.51
MRPL55-227ENST00000475832 KLHDC8AQ8IYD2 350 aa11.89□□□□□ -0.51
MRPL55-227ENST00000475832 CEP70Q8NHQ1 597 aa11.89□□□□□ -0.51
MRPL55-227ENST00000475832 TSACCQ96A04 125 aaPredicted RBP11.89□□□□□ -0.51
MRPL55-227ENST00000475832 PDXPQ96GD0 296 aa11.89□□□□□ -0.51
MRPL55-227ENST00000475832 RMDN2Q96LZ7 410 aa11.89□□□□□ -0.51
MRPL55-227ENST00000475832 MIPEPQ99797 713 aa11.89□□□□□ -0.51
MRPL55-227ENST00000475832 NTMT1Q9BV86 223 aa11.89□□□□□ -0.51
MRPL55-227ENST00000475832 SLC29A3Q9BZD2 475 aa11.89□□□□□ -0.51
MRPL55-227ENST00000475832 PCBD2Q9H0N5 130 aa11.89□□□□□ -0.51
MRPL55-227ENST00000475832 MIR1-1HGQ9H1L0 117 aa11.89□□□□□ -0.51
MRPL55-227ENST00000475832 IMP3Q9NV31 184 aaKnown RBP11.89□□□□□ -0.51
MRPL55-227ENST00000475832 GPRC5BQ9NZH0 403 aa11.89□□□□□ -0.51
MRPL55-227ENST00000475832 TRPS1Q9UHF7 1281 aa11.89□□□□□ -0.51
MRPL55-227ENST00000475832 INVSQ9Y283 1065 aa11.89□□□□□ -0.51
MRPL55-227ENST00000475832 TDRKHQ9Y2W6 561 aaKnown RBP11.89□□□□□ -0.51
MRPL55-227ENST00000475832 KCNE2Q9Y6J6 123 aa11.89□□□□□ -0.51
MRPL55-227ENST00000475832 DGKBQ9Y6T7 804 aa11.89□□□□□ -0.51
MRPL55-227ENST00000475832 ATXN2Q99700 1313 aaKnown RBP11.88□□□□□ -0.51
MRPL55-227ENST00000475832 TRPM6Q9BX84 2022 aa11.88□□□□□ -0.51
MRPL55-227ENST00000475832 SPTY2D1-AS1A0A0U1RR47 76 aa11.88□□□□□ -0.51
MRPL55-227ENST00000475832 SKAP2O75563 359 aaPredicted RBP11.88□□□□□ -0.51
MRPL55-227ENST00000475832 ATP5HO75947 161 aa11.88□□□□□ -0.51
MRPL55-227ENST00000475832 OR4F21O95013 312 aa11.88□□□□□ -0.51
MRPL55-227ENST00000475832 SLC16A8O95907 504 aa11.88□□□□□ -0.51
MRPL55-227ENST00000475832 KRT6AP02538 564 aa11.88□□□□□ -0.51
MRPL55-227ENST00000475832 KRT6BP04259 564 aa11.88□□□□□ -0.51
MRPL55-227ENST00000475832 SERPINA6P08185 405 aa11.88□□□□□ -0.51
MRPL55-227ENST00000475832 EZRP15311 586 aaKnown RBP11.88□□□□□ -0.51
MRPL55-227ENST00000475832 NCF2P19878 526 aaPredicted RBP11.88□□□□□ -0.51
MRPL55-227ENST00000475832 RPL10P27635 214 aaKnown RBP11.88□□□□□ -0.51
MRPL55-227ENST00000475832 ACTR1BP42025 376 aa11.88□□□□□ -0.51
MRPL55-227ENST00000475832 GDF5P43026 501 aa11.88□□□□□ -0.51
MRPL55-227ENST00000475832 KRT6CP48668 564 aa11.88□□□□□ -0.51
MRPL55-227ENST00000475832 PNLIPRP1P54315 467 aa11.88□□□□□ -0.51
MRPL55-227ENST00000475832 C21orf59P57076 290 aa11.88□□□□□ -0.51
MRPL55-227ENST00000475832 ACTR1AP61163 376 aa11.88□□□□□ -0.51
MRPL55-227ENST00000475832 IRX1P78414 480 aaPredicted RBP11.88□□□□□ -0.51
MRPL55-227ENST00000475832 CTBSQ01459 385 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms