RNA–Protein interactions for RNA: ENST00000474647.1

CCDC78-209, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 506 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-209ENST00000474647 SLC5A12Q1EHB4 618 aa13.45□□□□□ -0.26
CCDC78-209ENST00000474647 TUBB8Q3ZCM7 444 aa13.45□□□□□ -0.26
CCDC78-209ENST00000474647 FJX1Q86VR8 437 aa13.45□□□□□ -0.26
CCDC78-209ENST00000474647 TMTC1Q8IUR5 882 aa13.45□□□□□ -0.26
CCDC78-209ENST00000474647 PIANPQ8IYJ0 282 aa13.45□□□□□ -0.26
CCDC78-209ENST00000474647 SLC34A3Q8N130 599 aa13.45□□□□□ -0.26
CCDC78-209ENST00000474647 DNAJC22Q8N4W6 341 aa13.45□□□□□ -0.26
CCDC78-209ENST00000474647 C2orf73Q8N5S3 287 aaPredicted RBP13.45□□□□□ -0.26
CCDC78-209ENST00000474647 METTL27Q8N6F8 245 aaPredicted RBP13.45□□□□□ -0.26
CCDC78-209ENST00000474647 PDLIM2Q96JY6 352 aa13.45□□□□□ -0.26
CCDC78-209ENST00000474647 PPP1R2P1Q96PQ5 205 aa13.45□□□□□ -0.26
CCDC78-209ENST00000474647 ALS2CR12Q96Q35 445 aa13.45□□□□□ -0.26
CCDC78-209ENST00000474647 PHF12Q96QT6 1004 aa13.45□□□□□ -0.26
CCDC78-209ENST00000474647 C19orf43Q9BQ61 176 aa13.45□□□□□ -0.26
CCDC78-209ENST00000474647 CHRNA10Q9GZZ6 450 aa13.45□□□□□ -0.26
CCDC78-209ENST00000474647 SOX17Q9H6I2 414 aaPredicted RBP13.45□□□□□ -0.26
CCDC78-209ENST00000474647 EPS8L2Q9H6S3 715 aa13.45□□□□□ -0.26
CCDC78-209ENST00000474647 SLC22A11Q9NSA0 550 aa13.45□□□□□ -0.26
CCDC78-209ENST00000474647 PIH1D1Q9NWS0 290 aaKnown RBP13.45□□□□□ -0.26
CCDC78-209ENST00000474647 EURLQ9NYK6 297 aa13.45□□□□□ -0.26
CCDC78-209ENST00000474647 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.45□□□□□ -0.26
CCDC78-209ENST00000474647 CIDEBQ9UHD4 219 aa13.45□□□□□ -0.26
CCDC78-209ENST00000474647 FEZ2Q9UHY8 353 aaPredicted RBP13.45□□□□□ -0.26
CCDC78-209ENST00000474647 SCN2AQ99250 2005 aa13.45□□□□□ -0.26
CCDC78-209ENST00000474647 TACC2O95359 2948 aa13.44□□□□□ -0.26
CCDC78-209ENST00000474647 A0A1B0GX78 115 aa13.44□□□□□ -0.26
CCDC78-209ENST00000474647 OR51F1A6NGY5 319 aa13.44□□□□□ -0.26
CCDC78-209ENST00000474647 GOLGA6L6A8MZA4 724 aa13.44□□□□□ -0.26
CCDC78-209ENST00000474647 H7C0S8 307 aa13.44□□□□□ -0.26
CCDC78-209ENST00000474647 QSOX1O00391 747 aa13.44□□□□□ -0.26
CCDC78-209ENST00000474647 SOCS6O14544 535 aa13.44□□□□□ -0.26
CCDC78-209ENST00000474647 PJA2O43164 708 aa13.44□□□□□ -0.26
CCDC78-209ENST00000474647 HNRNPRO43390 633 aaKnown RBP13.44□□□□□ -0.26
CCDC78-209ENST00000474647 AP2A1O95782 977 aa13.44□□□□□ -0.26
CCDC78-209ENST00000474647 TPBGLP0DKB5 382 aa13.44□□□□□ -0.26
CCDC78-209ENST00000474647 EDN3P14138 238 aa13.44□□□□□ -0.26
CCDC78-209ENST00000474647 MSNP26038 577 aaKnown RBP13.44□□□□□ -0.26
CCDC78-209ENST00000474647 ACADLP28330 430 aa13.44□□□□□ -0.26
CCDC78-209ENST00000474647 TSFMP43897 325 aaKnown RBP13.44□□□□□ -0.26
CCDC78-209ENST00000474647 HADHBP55084 474 aaKnown RBP13.44□□□□□ -0.26
CCDC78-209ENST00000474647 KIR2DS3Q14952 304 aa13.44□□□□□ -0.26
CCDC78-209ENST00000474647 ZRSR2Q15696 482 aaKnown RBP13.44□□□□□ -0.26
CCDC78-209ENST00000474647 RBBP7Q16576 425 aa13.44□□□□□ -0.26
CCDC78-209ENST00000474647 C11orf63Q6NUN7 778 aa13.44□□□□□ -0.26
CCDC78-209ENST00000474647 FAM180AQ6UWF9 173 aa13.44□□□□□ -0.26
CCDC78-209ENST00000474647 ARHGEF18Q6ZSZ5 1173 aa13.44□□□□□ -0.26
CCDC78-209ENST00000474647 TC2NQ8N9U0 490 aa13.44□□□□□ -0.26
CCDC78-209ENST00000474647 LMNTD1Q8N9Z9 388 aa13.44□□□□□ -0.26
CCDC78-209ENST00000474647 SPC24Q8NBT2 197 aa13.44□□□□□ -0.26
CCDC78-209ENST00000474647 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.44□□□□□ -0.26
CCDC78-209ENST00000474647 FKBP10Q96AY3 582 aa13.44□□□□□ -0.26
CCDC78-209ENST00000474647 CDKN2AIPNLQ96HQ2 116 aa13.44□□□□□ -0.26
CCDC78-209ENST00000474647 THOC3Q96J01 351 aaKnown RBP13.44□□□□□ -0.26
CCDC78-209ENST00000474647 OSBPL8Q9BZF1 889 aa13.44□□□□□ -0.26
CCDC78-209ENST00000474647 HS3ST3B1Q9Y662 390 aa13.44□□□□□ -0.26
CCDC78-209ENST00000474647 ADGRG4Q8IZF6 3080 aa13.43□□□□□ -0.26
CCDC78-209ENST00000474647 PDZD2O15018 2839 aa13.43□□□□□ -0.26
CCDC78-209ENST00000474647 PRSS44E7EML9 344 aa13.43□□□□□ -0.26
CCDC78-209ENST00000474647 PIM1P11309 404 aaPredicted RBP13.43□□□□□ -0.26
CCDC78-209ENST00000474647 PRF1P14222 555 aa13.43□□□□□ -0.26
CCDC78-209ENST00000474647 ITGAXP20702 1163 aa13.43□□□□□ -0.26
CCDC78-209ENST00000474647 MCM3P25205 808 aa13.43□□□□□ -0.26
CCDC78-209ENST00000474647 ELAVL4P26378 380 aaKnown RBP13.43□□□□□ -0.26
CCDC78-209ENST00000474647 FBN2P35556 2912 aa13.43□□□□□ -0.26
CCDC78-209ENST00000474647 ARSFP54793 590 aa13.43□□□□□ -0.26
CCDC78-209ENST00000474647 COPS2P61201 443 aa13.43□□□□□ -0.26
CCDC78-209ENST00000474647 NKG7Q16617 165 aa13.43□□□□□ -0.26
CCDC78-209ENST00000474647 LINC00696Q6ZRV3 163 aa13.43□□□□□ -0.26
CCDC78-209ENST00000474647 COX15Q7KZN9 410 aa13.43□□□□□ -0.26
CCDC78-209ENST00000474647 OVCH1Q7RTY7 1134 aa13.43□□□□□ -0.26
CCDC78-209ENST00000474647 TAB3Q8N5C8 712 aaPredicted RBP13.43□□□□□ -0.26
CCDC78-209ENST00000474647 CFAP61Q8NHU2 1237 aa13.43□□□□□ -0.26
CCDC78-209ENST00000474647 COG1Q8WTW3 980 aa13.43□□□□□ -0.26
CCDC78-209ENST00000474647 STYXQ8WUJ0 223 aa13.43□□□□□ -0.26
CCDC78-209ENST00000474647 FAR1Q8WVX9 515 aa13.43□□□□□ -0.26
CCDC78-209ENST00000474647 MOCOSQ96EN8 888 aa13.43□□□□□ -0.26
CCDC78-209ENST00000474647 MAGEB10Q96LZ2 347 aaPredicted RBP13.43□□□□□ -0.26
CCDC78-209ENST00000474647 SPSB2Q99619 263 aa13.43□□□□□ -0.26
CCDC78-209ENST00000474647 UNKQ9C0B0 810 aaKnown RBP13.43□□□□□ -0.26
CCDC78-209ENST00000474647 LHPPQ9H008 270 aa13.43□□□□□ -0.26
CCDC78-209ENST00000474647 WDR54Q9H977 334 aa13.43□□□□□ -0.26
CCDC78-209ENST00000474647 ARNT2Q9HBZ2 717 aa13.43□□□□□ -0.26
CCDC78-209ENST00000474647 MRM3Q9HC36 420 aaKnown RBP13.43□□□□□ -0.26
CCDC78-209ENST00000474647 CUTCQ9NTM9 273 aa13.43□□□□□ -0.26
CCDC78-209ENST00000474647 CTSFQ9UBX1 484 aa13.43□□□□□ -0.26
CCDC78-209ENST00000474647 PCNX1Q96RV3 2341 aa13.42□□□□□ -0.26
CCDC78-209ENST00000474647 SLC5A10A0PJK1 596 aa13.42□□□□□ -0.26
CCDC78-209ENST00000474647 BHMG1C9JSJ3 638 aaPredicted RBP13.42□□□□□ -0.26
CCDC78-209ENST00000474647 DSCR3O14972 297 aa13.42□□□□□ -0.26
CCDC78-209ENST00000474647 PTMAP06454 111 aaKnown RBP13.42□□□□□ -0.26
CCDC78-209ENST00000474647 OR56A5P0C7T3 313 aa13.42□□□□□ -0.26
CCDC78-209ENST00000474647 PKLRP30613 574 aa13.42□□□□□ -0.26
CCDC78-209ENST00000474647 CTNNA1P35221 906 aaKnown RBP13.42□□□□□ -0.26
CCDC78-209ENST00000474647 GRIA3P42263 894 aa13.42□□□□□ -0.26
CCDC78-209ENST00000474647 OR1D4P47884 311 aa13.42□□□□□ -0.26
CCDC78-209ENST00000474647 RAB28P51157 221 aa13.42□□□□□ -0.26
CCDC78-209ENST00000474647 ITIH4Q14624 930 aa13.42□□□□□ -0.26
CCDC78-209ENST00000474647 TLR1Q15399 786 aa13.42□□□□□ -0.26
CCDC78-209ENST00000474647 B3GNTL1Q67FW5 361 aaPredicted RBP13.42□□□□□ -0.26
CCDC78-209ENST00000474647 KIRREL2Q6UWL6 708 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms