RNA–Protein interactions for RNA: ENST00000471488.1

HDAC1-204, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-204ENST00000471488 ZNF766Q5HY98 468 aa6.58□□□□□ -1.36
HDAC1-204ENST00000471488 CES4AQ5XG92 561 aa6.58□□□□□ -1.36
HDAC1-204ENST00000471488 FCRLBQ6BAA4 426 aa6.58□□□□□ -1.36
HDAC1-204ENST00000471488 NAPRTQ6XQN6 538 aa6.58□□□□□ -1.36
HDAC1-204ENST00000471488 TAS2R42Q7RTR8 314 aa6.58□□□□□ -1.36
HDAC1-204ENST00000471488 IRF2BP2Q7Z5L9 587 aa6.58□□□□□ -1.36
HDAC1-204ENST00000471488 PQLC3Q8N755 202 aa6.58□□□□□ -1.36
HDAC1-204ENST00000471488 AMER2Q8N7J2 671 aa6.58□□□□□ -1.36
HDAC1-204ENST00000471488 OR4K2Q8NGD2 314 aa6.58□□□□□ -1.36
HDAC1-204ENST00000471488 DENND1AQ8TEH3 1009 aa6.58□□□□□ -1.36
HDAC1-204ENST00000471488 COPS8Q99627 209 aa6.58□□□□□ -1.36
HDAC1-204ENST00000471488 SELENOSQ9BQE4 189 aa6.58□□□□□ -1.36
HDAC1-204ENST00000471488 ZNF670Q9BS34 389 aa6.58□□□□□ -1.36
HDAC1-204ENST00000471488 TMEM121Q9BTD3 319 aa6.58□□□□□ -1.36
HDAC1-204ENST00000471488 XPO4Q9C0E2 1151 aaKnown RBP6.58□□□□□ -1.36
HDAC1-204ENST00000471488 NUP62CLQ9H1M0 184 aa6.58□□□□□ -1.36
HDAC1-204ENST00000471488 TRABDQ9H4I3 376 aa6.58□□□□□ -1.36
HDAC1-204ENST00000471488 TFB2MQ9H5Q4 396 aaKnown RBP6.58□□□□□ -1.36
HDAC1-204ENST00000471488 MVB12BQ9H7P6 319 aa6.58□□□□□ -1.36
HDAC1-204ENST00000471488 WDR54Q9H977 334 aa6.58□□□□□ -1.36
HDAC1-204ENST00000471488 COG4Q9H9E3 785 aa6.58□□□□□ -1.36
HDAC1-204ENST00000471488 VPS37BQ9H9H4 285 aa6.58□□□□□ -1.36
HDAC1-204ENST00000471488 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.58□□□□□ -1.36
HDAC1-204ENST00000471488 IL17CQ9P0M4 197 aa6.58□□□□□ -1.36
HDAC1-204ENST00000471488 KLHL8Q9P2G9 620 aaPredicted RBP6.58□□□□□ -1.36
HDAC1-204ENST00000471488 FAM153AQ9UHL3 310 aa6.58□□□□□ -1.36
HDAC1-204ENST00000471488 FKBPLQ9UIM3 349 aa6.58□□□□□ -1.36
HDAC1-204ENST00000471488 DOCK10Q96BY6 2186 aa6.58□□□□□ -1.36
HDAC1-204ENST00000471488 NUP210LQ5VU65 1888 aa6.58□□□□□ -1.36
HDAC1-204ENST00000471488 C2orf81A6NN90 581 aa6.57□□□□□ -1.36
HDAC1-204ENST00000471488 CCL22O00626 93 aa6.57□□□□□ -1.36
HDAC1-204ENST00000471488 PRRG2O14669 202 aa6.57□□□□□ -1.36
HDAC1-204ENST00000471488 CDC40O60508 579 aaKnown RBP eCLIP6.57□□□□□ -1.36
HDAC1-204ENST00000471488 SRP72O76094 671 aaKnown RBP6.57□□□□□ -1.36
HDAC1-204ENST00000471488 TSPAN12O95859 305 aa6.57□□□□□ -1.36
HDAC1-204ENST00000471488 ALBP02768 609 aa6.57□□□□□ -1.36
HDAC1-204ENST00000471488 TPOP07202 933 aa6.57□□□□□ -1.36
HDAC1-204ENST00000471488 ZGLP1P0C6A0 271 aa6.57□□□□□ -1.36
HDAC1-204ENST00000471488 ERVK-10P10266 1014 aa6.57□□□□□ -1.36
HDAC1-204ENST00000471488 ITGAMP11215 1152 aa6.57□□□□□ -1.36
HDAC1-204ENST00000471488 ATP1B2P14415 290 aaPredicted RBP6.57□□□□□ -1.36
HDAC1-204ENST00000471488 NFKB1P19838 968 aa6.57□□□□□ -1.36
HDAC1-204ENST00000471488 FBLP22087 321 aaKnown RBP6.57□□□□□ -1.36
HDAC1-204ENST00000471488 EEF1DP29692 281 aaKnown RBP6.57□□□□□ -1.36
HDAC1-204ENST00000471488 DGKQP52824 942 aa6.57□□□□□ -1.36
HDAC1-204ENST00000471488 EMP2P54851 167 aa6.57□□□□□ -1.36
HDAC1-204ENST00000471488 VSX2P58304 361 aaPredicted RBP6.57□□□□□ -1.36
HDAC1-204ENST00000471488 OC90Q02509 493 aaPredicted RBP6.57□□□□□ -1.36
HDAC1-204ENST00000471488 BOP1Q14137 746 aaKnown RBP6.57□□□□□ -1.36
HDAC1-204ENST00000471488 GRM7Q14831 915 aa6.57□□□□□ -1.36
HDAC1-204ENST00000471488 PDK1Q15118 436 aa6.57□□□□□ -1.36
HDAC1-204ENST00000471488 PDK2Q15119 407 aa6.57□□□□□ -1.36
HDAC1-204ENST00000471488 SKOR2Q2VWA4 1001 aaPredicted RBP6.57□□□□□ -1.36
HDAC1-204ENST00000471488 BCL7AQ4VC05 210 aa6.57□□□□□ -1.36
HDAC1-204ENST00000471488 CDKAL1Q5VV42 579 aa6.57□□□□□ -1.36
HDAC1-204ENST00000471488 FBXW10Q5XX13 1052 aa6.57□□□□□ -1.36
HDAC1-204ENST00000471488 MICALCLQ6ZW33 695 aa6.57□□□□□ -1.36
HDAC1-204ENST00000471488 COX15Q7KZN9 410 aa6.57□□□□□ -1.36
HDAC1-204ENST00000471488 NDUFAF7Q7L592 441 aa6.57□□□□□ -1.36
HDAC1-204ENST00000471488 CCDC50Q8IVM0 306 aa6.57□□□□□ -1.36
HDAC1-204ENST00000471488 DNAJC22Q8N4W6 341 aa6.57□□□□□ -1.36
HDAC1-204ENST00000471488 CFAP61Q8NHU2 1237 aa6.57□□□□□ -1.36
HDAC1-204ENST00000471488 STT3BQ8TCJ2 826 aa6.57□□□□□ -1.36
HDAC1-204ENST00000471488 NANOS1Q8WY41 292 aaKnown RBP6.57□□□□□ -1.36
HDAC1-204ENST00000471488 HAS2Q92819 552 aa6.57□□□□□ -1.36
HDAC1-204ENST00000471488 FATE1Q969F0 183 aa6.57□□□□□ -1.36
HDAC1-204ENST00000471488 NACC2Q96BF6 587 aa6.57□□□□□ -1.36
HDAC1-204ENST00000471488 GPR137Q96N19 417 aa6.57□□□□□ -1.36
HDAC1-204ENST00000471488 SMR3AQ99954 134 aa6.57□□□□□ -1.36
HDAC1-204ENST00000471488 APOL2Q9BQE5 337 aa6.57□□□□□ -1.36
HDAC1-204ENST00000471488 TRIM56Q9BRZ2 755 aaKnown RBP6.57□□□□□ -1.36
HDAC1-204ENST00000471488 HES7Q9BYE0 225 aa6.57□□□□□ -1.36
HDAC1-204ENST00000471488 UCK2Q9BZX2 261 aa6.57□□□□□ -1.36
HDAC1-204ENST00000471488 ZNF304Q9HCX3 659 aa6.57□□□□□ -1.36
HDAC1-204ENST00000471488 DNAJB12Q9NXW2 375 aaKnown RBP6.57□□□□□ -1.36
HDAC1-204ENST00000471488 HACD3Q9P035 362 aa6.57□□□□□ -1.36
HDAC1-204ENST00000471488 CTTNBP2NLQ9P2B4 639 aa6.57□□□□□ -1.36
HDAC1-204ENST00000471488 ZNF282Q9UDV7 671 aaPredicted RBP6.57□□□□□ -1.36
HDAC1-204ENST00000471488 ZC3H7BQ9UGR2 993 aaKnown RBP6.57□□□□□ -1.36
HDAC1-204ENST00000471488 TEKT2Q9UIF3 430 aa6.57□□□□□ -1.36
HDAC1-204ENST00000471488 PLEKHA6Q9Y2H5 1048 aa6.57□□□□□ -1.36
HDAC1-204ENST00000471488 CNTRLQ7Z7A1 2325 aa6.57□□□□□ -1.36
HDAC1-204ENST00000471488 ANKHD1Q8IWZ3 2542 aaKnown RBP6.57□□□□□ -1.36
HDAC1-204ENST00000471488 ABCA2Q9BZC7 2435 aa6.57□□□□□ -1.36
HDAC1-204ENST00000471488 DNHD1Q96M86 4753 aa6.56□□□□□ -1.36
HDAC1-204ENST00000471488 SPG11Q96JI7 2443 aa6.56□□□□□ -1.36
HDAC1-204ENST00000471488 PCM1Q15154 2024 aa6.56□□□□□ -1.36
HDAC1-204ENST00000471488 KLHL33A6NCF5 533 aa6.56□□□□□ -1.36
HDAC1-204ENST00000471488 FOXO6A8MYZ6 492 aa6.56□□□□□ -1.36
HDAC1-204ENST00000471488 H3BMH7 237 aa6.56□□□□□ -1.36
HDAC1-204ENST00000471488 GAPDHSO14556 408 aaPredicted RBP6.56□□□□□ -1.36
HDAC1-204ENST00000471488 RASGRF2O14827 1237 aa6.56□□□□□ -1.36
HDAC1-204ENST00000471488 KDM1AO60341 852 aa6.56□□□□□ -1.36
HDAC1-204ENST00000471488 BMP10O95393 424 aa6.56□□□□□ -1.36
HDAC1-204ENST00000471488 AGTP01019 485 aa6.56□□□□□ -1.36
HDAC1-204ENST00000471488 SERPINA7P05543 415 aa6.56□□□□□ -1.36
HDAC1-204ENST00000471488 COX6A1P12074 109 aa6.56□□□□□ -1.36
HDAC1-204ENST00000471488 GZMAP12544 262 aa6.56□□□□□ -1.36
HDAC1-204ENST00000471488 ITGALP20701 1170 aa6.56□□□□□ -1.36
HDAC1-204ENST00000471488 SOX11P35716 441 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms