RNA–Protein interactions for RNA: ENST00000470240.5

SMC4-212, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-212ENST00000470240 SLC32A1Q9H598 525 aa7.82□□□□□ -1.16
SMC4-212ENST00000470240 ELOVL6Q9H5J4 265 aa7.82□□□□□ -1.16
SMC4-212ENST00000470240 NANOGQ9H9S0 305 aa7.82□□□□□ -1.16
SMC4-212ENST00000470240 IL26Q9NPH9 171 aa7.82□□□□□ -1.16
SMC4-212ENST00000470240 C1orf109Q9NX04 203 aa7.82□□□□□ -1.16
SMC4-212ENST00000470240 ARL15Q9NXU5 204 aa7.82□□□□□ -1.16
SMC4-212ENST00000470240 ZMYM5Q9UJ78 669 aa7.82□□□□□ -1.16
SMC4-212ENST00000470240 OAZ3Q9UMX2 235 aa7.82□□□□□ -1.16
SMC4-212ENST00000470240 TMED5Q9Y3A6 229 aa7.82□□□□□ -1.16
SMC4-212ENST00000470240 TRIM17Q9Y577 477 aa7.82□□□□□ -1.16
SMC4-212ENST00000470240 ORC6Q9Y5N6 252 aa7.82□□□□□ -1.16
SMC4-212ENST00000470240 AK5Q9Y6K8 562 aa7.82□□□□□ -1.16
SMC4-212ENST00000470240 GOLGB1Q14789 3259 aaKnown RBP7.82□□□□□ -1.16
SMC4-212ENST00000470240 OBSL1O75147 1896 aa7.81□□□□□ -1.16
SMC4-212ENST00000470240 KIAA1671Q9BY89 1806 aa7.81□□□□□ -1.16
SMC4-212ENST00000470240 TCRBV5S2A0A599 114 aa7.81□□□□□ -1.16
SMC4-212ENST00000470240 C16orf96A6NNT2 1141 aa7.81□□□□□ -1.16
SMC4-212ENST00000470240 H0YAE9 185 aa7.81□□□□□ -1.16
SMC4-212ENST00000470240 MANBAO00462 879 aa7.81□□□□□ -1.16
SMC4-212ENST00000470240 EI24O14681 340 aa7.81□□□□□ -1.16
SMC4-212ENST00000470240 ERN1O75460 977 aaKnown RBP7.81□□□□□ -1.16
SMC4-212ENST00000470240 RSL1D1O76021 490 aaKnown RBP7.81□□□□□ -1.16
SMC4-212ENST00000470240 RECQL5O94762 991 aaPredicted RBP7.81□□□□□ -1.16
SMC4-212ENST00000470240 MYO1DO94832 1006 aa7.81□□□□□ -1.16
SMC4-212ENST00000470240 AP2A2O94973 939 aa7.81□□□□□ -1.16
SMC4-212ENST00000470240 TFAP2AP05549 437 aa7.81□□□□□ -1.16
SMC4-212ENST00000470240 MTHFD1P11586 935 aaKnown RBP7.81□□□□□ -1.16
SMC4-212ENST00000470240 ACPPP15309 386 aa7.81□□□□□ -1.16
SMC4-212ENST00000470240 CKMT2P17540 419 aa7.81□□□□□ -1.16
SMC4-212ENST00000470240 COL8A1P27658 744 aa7.81□□□□□ -1.16
SMC4-212ENST00000470240 S100A3P33764 101 aa7.81□□□□□ -1.16
SMC4-212ENST00000470240 GRIA2P42262 883 aa7.81□□□□□ -1.16
SMC4-212ENST00000470240 AP1S2P56377 157 aa7.81□□□□□ -1.16
SMC4-212ENST00000470240 RPS14P62263 151 aaKnown RBP7.81□□□□□ -1.16
SMC4-212ENST00000470240 CYP4F8P98187 520 aa7.81□□□□□ -1.16
SMC4-212ENST00000470240 CAP1Q01518 475 aa7.81□□□□□ -1.16
SMC4-212ENST00000470240 DPY19L1Q2PZI1 675 aa7.81□□□□□ -1.16
SMC4-212ENST00000470240 MYLK3Q32MK0 819 aa7.81□□□□□ -1.16
SMC4-212ENST00000470240 GGTA1PQ4G0N0 100 aa7.81□□□□□ -1.16
SMC4-212ENST00000470240 CARD16Q5EG05 197 aa7.81□□□□□ -1.16
SMC4-212ENST00000470240 NHSL2Q5HYW2 709 aa7.81□□□□□ -1.16
SMC4-212ENST00000470240 PAGE3Q5JUK9 113 aa7.81□□□□□ -1.16
SMC4-212ENST00000470240 PLEKHS1Q5SXH7 462 aa7.81□□□□□ -1.16
SMC4-212ENST00000470240 GPRC6AQ5T6X5 926 aa7.81□□□□□ -1.16
SMC4-212ENST00000470240 BRAT1Q6PJG6 821 aa7.81□□□□□ -1.16
SMC4-212ENST00000470240 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.81□□□□□ -1.164e-23■■■■■ 72.8
SMC4-212ENST00000470240 Q6ZSR9 355 aa7.81□□□□□ -1.16
SMC4-212ENST00000470240 MSANTD1Q6ZTZ1 278 aa7.81□□□□□ -1.16
SMC4-212ENST00000470240 UBE2R2Q712K3 238 aaPredicted RBP7.81□□□□□ -1.16
SMC4-212ENST00000470240 PATL1Q86TB9 770 aaKnown RBP7.81□□□□□ -1.16
SMC4-212ENST00000470240 RGL4Q8IZJ4 473 aa7.81□□□□□ -1.16
SMC4-212ENST00000470240 LIX1Q8N485 282 aa7.81□□□□□ -1.16
SMC4-212ENST00000470240 DCBLD1Q8N8Z6 715 aa7.81□□□□□ -1.16
SMC4-212ENST00000470240 ZNF555Q8NEP9 628 aa7.81□□□□□ -1.16
SMC4-212ENST00000470240 CSGALNACT1Q8TDX6 532 aa7.81□□□□□ -1.16
SMC4-212ENST00000470240 SELENOMQ8WWX9 145 aa7.81□□□□□ -1.16
SMC4-212ENST00000470240 ATL1Q8WXF7 558 aa7.81□□□□□ -1.16
SMC4-212ENST00000470240 TFAP2CQ92754 450 aa7.81□□□□□ -1.16
SMC4-212ENST00000470240 ESAMQ96AP7 390 aa7.81□□□□□ -1.16
SMC4-212ENST00000470240 BIRC7Q96CA5 298 aa7.81□□□□□ -1.16
SMC4-212ENST00000470240 ALG14Q96F25 216 aa7.81□□□□□ -1.16
SMC4-212ENST00000470240 SCRN2Q96FV2 425 aa7.81□□□□□ -1.16
SMC4-212ENST00000470240 NSMCE3Q96MG7 304 aa7.81□□□□□ -1.16
SMC4-212ENST00000470240 PPM1MQ96MI6 270 aa7.81□□□□□ -1.16
SMC4-212ENST00000470240 SEPHS2Q99611 448 aa7.81□□□□□ -1.16
SMC4-212ENST00000470240 MDFIQ99750 246 aa7.81□□□□□ -1.16
SMC4-212ENST00000470240 CHID1Q9BWS9 393 aa7.81□□□□□ -1.16
SMC4-212ENST00000470240 VN1R3Q9BXE9 311 aa7.81□□□□□ -1.16
SMC4-212ENST00000470240 ING2Q9H160 280 aa7.81□□□□□ -1.16
SMC4-212ENST00000470240 TNKS2Q9H2K2 1166 aa7.81□□□□□ -1.16
SMC4-212ENST00000470240 ZDHHC6Q9H6R6 413 aa7.81□□□□□ -1.16
SMC4-212ENST00000470240 ZNF334Q9HCZ1 680 aaPredicted RBP7.81□□□□□ -1.16
SMC4-212ENST00000470240 SLC52A3Q9NQ40 469 aa7.81□□□□□ -1.16
SMC4-212ENST00000470240 TMEM39AQ9NV64 488 aa7.81□□□□□ -1.16
SMC4-212ENST00000470240 TBC1D14Q9P2M4 693 aa7.81□□□□□ -1.16
SMC4-212ENST00000470240 HECAQ9UBI9 543 aaPredicted RBP7.81□□□□□ -1.16
SMC4-212ENST00000470240 BLOC1S6Q9UL45 172 aa7.81□□□□□ -1.16
SMC4-212ENST00000470240 OGDHLQ9ULD0 1010 aa7.81□□□□□ -1.16
SMC4-212ENST00000470240 HS3ST2Q9Y278 367 aa7.81□□□□□ -1.16
SMC4-212ENST00000470240 FADS3Q9Y5Q0 445 aa7.81□□□□□ -1.16
SMC4-212ENST00000470240 SCN8AQ9UQD0 1980 aa7.8□□□□□ -1.16
SMC4-212ENST00000470240 A0A1B0GTL3 188 aa7.8□□□□□ -1.16
SMC4-212ENST00000470240 ELOVL7A1L3X0 281 aa7.8□□□□□ -1.16
SMC4-212ENST00000470240 C7orf72A4D263 438 aa7.8□□□□□ -1.16
SMC4-212ENST00000470240 FAM149AA5PLN7 773 aa7.8□□□□□ -1.16
SMC4-212ENST00000470240 EVPLLA8MZ36 301 aa7.8□□□□□ -1.16
SMC4-212ENST00000470240 FAM220BPB1ANY3 271 aa7.8□□□□□ -1.16
SMC4-212ENST00000470240 K7ERQ8 282 aa7.8□□□□□ -1.16
SMC4-212ENST00000470240 ZNF701M0R085 212 aaPredicted RBP7.8□□□□□ -1.16
SMC4-212ENST00000470240 LEFTY2O00292 366 aa7.8□□□□□ -1.16
SMC4-212ENST00000470240 GFRA2O00451 464 aa7.8□□□□□ -1.16
SMC4-212ENST00000470240 FFAR3O14843 346 aa7.8□□□□□ -1.16
SMC4-212ENST00000470240 TEX28O15482 410 aa7.8□□□□□ -1.16
SMC4-212ENST00000470240 GPR42O15529 346 aa7.8□□□□□ -1.16
SMC4-212ENST00000470240 PGRP06401 933 aa7.8□□□□□ -1.16
SMC4-212ENST00000470240 ETS2P15036 469 aa7.8□□□□□ -1.16
SMC4-212ENST00000470240 NCK1P16333 377 aa7.8□□□□□ -1.16
SMC4-212ENST00000470240 GGT1P19440 569 aa7.8□□□□□ -1.16
SMC4-212ENST00000470240 OXTRP30559 389 aa7.8□□□□□ -1.16
SMC4-212ENST00000470240 HTR6P50406 440 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms