RNA–Protein interactions for RNA: ENST00000469739.6

TOP3A-203, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 3,196 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-203ENST00000469739 TRIML2Q8N7C3 387 aa9.21□□□□□ -0.94
TOP3A-203ENST00000469739 SELENOMQ8WWX9 145 aa9.21□□□□□ -0.94
TOP3A-203ENST00000469739 APOLD1Q96LR9 279 aa9.21□□□□□ -0.94
TOP3A-203ENST00000469739 NUDT4Q9NZJ9 180 aa9.21□□□□□ -0.94
TOP3A-203ENST00000469739 LIMD1Q9UGP4 676 aa9.21□□□□□ -0.94
TOP3A-203ENST00000469739 ABHD14A-ACY1A0A1B0GW23 586 aa9.2□□□□□ -0.94
TOP3A-203ENST00000469739 GRXCR1A8MXD5 290 aa9.2□□□□□ -0.94
TOP3A-203ENST00000469739 SCAMP1O15126 338 aa9.2□□□□□ -0.94
TOP3A-203ENST00000469739 STK16O75716 305 aa9.2□□□□□ -0.94
TOP3A-203ENST00000469739 OTCP00480 354 aa9.2□□□□□ -0.94
TOP3A-203ENST00000469739 GBAP04062 536 aa9.2□□□□□ -0.94
TOP3A-203ENST00000469739 ADH1AP07327 375 aa9.2□□□□□ -0.94
TOP3A-203ENST00000469739 RHOP08100 348 aa9.2□□□□□ -0.94
TOP3A-203ENST00000469739 PABPC1P11940 636 aaKnown RBP9.2□□□□□ -0.94
TOP3A-203ENST00000469739 RCAN2Q14206 197 aa9.2□□□□□ -0.94
TOP3A-203ENST00000469739 XKR7Q5GH72 579 aa9.2□□□□□ -0.94
TOP3A-203ENST00000469739 C6orf183Q5T699 404 aa9.2□□□□□ -0.94
TOP3A-203ENST00000469739 GLYATQ6IB77 296 aa9.2□□□□□ -0.94
TOP3A-203ENST00000469739 FAM180BQ6P0A1 224 aa9.2□□□□□ -0.94
TOP3A-203ENST00000469739 SUSD1Q6UWL2 747 aa9.2□□□□□ -0.94
TOP3A-203ENST00000469739 DCDC5Q6ZRR9 648 aa9.2□□□□□ -0.94
TOP3A-203ENST00000469739 USP45Q70EL2 814 aa9.2□□□□□ -0.94
TOP3A-203ENST00000469739 TMEM199Q8N511 208 aa9.2□□□□□ -0.94
TOP3A-203ENST00000469739 FIBINQ8TAL6 211 aa9.2□□□□□ -0.94
TOP3A-203ENST00000469739 POF1BQ8WVV4 589 aa9.2□□□□□ -0.94
TOP3A-203ENST00000469739 RHBDF1Q96CC6 855 aa9.2□□□□□ -0.94
TOP3A-203ENST00000469739 ZNF382Q96SR6 550 aa9.2□□□□□ -0.94
TOP3A-203ENST00000469739 GPATCH1Q9BRR8 931 aaKnown RBP9.2□□□□□ -0.94
TOP3A-203ENST00000469739 HERC2P3Q9BVR0 1158 aa9.2□□□□□ -0.94
TOP3A-203ENST00000469739 RIOK2Q9BVS4 552 aaKnown RBP9.2□□□□□ -0.94
TOP3A-203ENST00000469739 ARMC7Q9H6L4 198 aa9.2□□□□□ -0.94
TOP3A-203ENST00000469739 HPS4Q9NQG7 708 aa9.2□□□□□ -0.94
TOP3A-203ENST00000469739 DNMT3BQ9UBC3 853 aaKnown RBP9.2□□□□□ -0.94
TOP3A-203ENST00000469739 TMPRSS11EQ9UL52 423 aa9.2□□□□□ -0.94
TOP3A-203ENST00000469739 PDE10AQ9Y233 779 aa9.2□□□□□ -0.94
TOP3A-203ENST00000469739 DLGAP4Q9Y2H0 992 aa9.2□□□□□ -0.94
TOP3A-203ENST00000469739 PLXNA4Q9HCM2 1894 aa9.2□□□□□ -0.94
TOP3A-203ENST00000469739 TCRBV3S1A0A5B6 114 aa9.2□□□□□ -0.94
TOP3A-203ENST00000469739 PABPN1LA6NDY0 278 aaKnown RBP9.2□□□□□ -0.94
TOP3A-203ENST00000469739 C1SP09871 688 aa9.2□□□□□ -0.94
TOP3A-203ENST00000469739 CTSAP10619 480 aa9.2□□□□□ -0.94
TOP3A-203ENST00000469739 ZNF12P17014 697 aa9.2□□□□□ -0.94
TOP3A-203ENST00000469739 CERS6Q6ZMG9 384 aa9.2□□□□□ -0.94
TOP3A-203ENST00000469739 TPRG1Q6ZUI0 275 aa9.2□□□□□ -0.94
TOP3A-203ENST00000469739 HTR3DQ70Z44 454 aa9.2□□□□□ -0.94
TOP3A-203ENST00000469739 EPHX4Q8IUS5 362 aa9.2□□□□□ -0.94
TOP3A-203ENST00000469739 C10orf111Q8N326 155 aa9.2□□□□□ -0.94
TOP3A-203ENST00000469739 ROPN1LQ96C74 230 aa9.2□□□□□ -0.94
TOP3A-203ENST00000469739 SCRN2Q96FV2 425 aa9.2□□□□□ -0.94
TOP3A-203ENST00000469739 P2RY13Q9BPV8 354 aa9.2□□□□□ -0.94
TOP3A-203ENST00000469739 HAUS8Q9BT25 410 aa9.2□□□□□ -0.94
TOP3A-203ENST00000469739 CD244Q9BZW8 370 aa9.2□□□□□ -0.94
TOP3A-203ENST00000469739 DPY30Q9C005 99 aa9.2□□□□□ -0.94
TOP3A-203ENST00000469739 PAIP1Q9H074 479 aaKnown RBP9.2□□□□□ -0.94
TOP3A-203ENST00000469739 ZBP1Q9H171 429 aa9.2□□□□□ -0.94
TOP3A-203ENST00000469739 TDP1Q9NUW8 608 aa9.2□□□□□ -0.94
TOP3A-203ENST00000469739 TRNAU1APQ9NX07 287 aaKnown RBP9.2□□□□□ -0.94
TOP3A-203ENST00000469739 SLC25A13Q9UJS0 675 aa9.2□□□□□ -0.94
TOP3A-203ENST00000469739 LEF1Q9UJU2 399 aaPredicted RBP9.2□□□□□ -0.94
TOP3A-203ENST00000469739 RIMKLBQ9ULI2 386 aa9.2□□□□□ -0.94
TOP3A-203ENST00000469739 PCDHB1Q9Y5F3 818 aa9.2□□□□□ -0.94
TOP3A-203ENST00000469739 NINQ8N4C6 2090 aa9.2□□□□□ -0.94
TOP3A-203ENST00000469739 KIAA1671Q9BY89 1806 aa9.2□□□□□ -0.94
TOP3A-203ENST00000469739 H7C0S8 307 aa9.2□□□□□ -0.94
TOP3A-203ENST00000469739 GSTA4O15217 222 aa9.2□□□□□ -0.94
TOP3A-203ENST00000469739 HTRA2O43464 458 aaPredicted RBP9.2□□□□□ -0.94
TOP3A-203ENST00000469739 PDYNP01213 254 aa9.2□□□□□ -0.94
TOP3A-203ENST00000469739 FUCA1P04066 466 aa9.2□□□□□ -0.94
TOP3A-203ENST00000469739 C8BP07358 591 aa9.2□□□□□ -0.94
TOP3A-203ENST00000469739 MYCLP1P12525 358 aaPredicted RBP9.2□□□□□ -0.94
TOP3A-203ENST00000469739 FASP25445 335 aa9.2□□□□□ -0.94
TOP3A-203ENST00000469739 HOXD11P31277 338 aaPredicted RBP9.2□□□□□ -0.94
TOP3A-203ENST00000469739 INPP5AQ14642 412 aa9.2□□□□□ -0.94
TOP3A-203ENST00000469739 CDKN3Q16667 212 aa9.2□□□□□ -0.94
TOP3A-203ENST00000469739 CARD16Q5EG05 197 aa9.2□□□□□ -0.94
TOP3A-203ENST00000469739 DEPDC1Q5TB30 811 aa9.2□□□□□ -0.94
TOP3A-203ENST00000469739 TBPL2Q6SJ96 375 aa9.2□□□□□ -0.94
TOP3A-203ENST00000469739 DDHD1Q8NEL9 900 aa9.2□□□□□ -0.94
TOP3A-203ENST00000469739 BIRC7Q96CA5 298 aa9.2□□□□□ -0.94
TOP3A-203ENST00000469739 CGREF1Q99674 301 aa9.2□□□□□ -0.94
TOP3A-203ENST00000469739 HOPXQ9BPY8 73 aaPredicted RBP9.2□□□□□ -0.94
TOP3A-203ENST00000469739 LRRC3Q9BY71 257 aa9.2□□□□□ -0.94
TOP3A-203ENST00000469739 ELOVL6Q9H5J4 265 aa9.2□□□□□ -0.94
TOP3A-203ENST00000469739 SLC52A3Q9NQ40 469 aa9.2□□□□□ -0.94
TOP3A-203ENST00000469739 SAGE1Q9NXZ1 904 aa9.2□□□□□ -0.94
TOP3A-203ENST00000469739 PADI4Q9UM07 663 aa9.2□□□□□ -0.94
TOP3A-203ENST00000469739 PCDHA9Q9Y5H5 950 aa9.2□□□□□ -0.94
TOP3A-203ENST00000469739 OBSL1O75147 1896 aa9.19□□□□□ -0.94
TOP3A-203ENST00000469739 DOCK9Q9BZ29 2069 aa9.19□□□□□ -0.94
TOP3A-203ENST00000469739 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.19□□□□□ -0.94
TOP3A-203ENST00000469739 B4GAT1O43505 415 aa9.19□□□□□ -0.94
TOP3A-203ENST00000469739 HIST1H2AGP0C0S8 130 aaPredicted RBP9.19□□□□□ -0.94
TOP3A-203ENST00000469739 HIST1H2ADP20671 130 aa9.19□□□□□ -0.94
TOP3A-203ENST00000469739 CDH3P22223 829 aa9.19□□□□□ -0.94
TOP3A-203ENST00000469739 PRKACGP22612 351 aa9.19□□□□□ -0.94
TOP3A-203ENST00000469739 CTSCP53634 463 aa9.19□□□□□ -0.94
TOP3A-203ENST00000469739 MAPKAPK3Q16644 382 aa9.19□□□□□ -0.94
TOP3A-203ENST00000469739 ADGRG5Q8IZF4 528 aa9.19□□□□□ -0.94
TOP3A-203ENST00000469739 SLC7A5P1Q8MH63 180 aa9.19□□□□□ -0.94
TOP3A-203ENST00000469739 DTWD1Q8N5C7 304 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms