RNA–Protein interactions for RNA: ENST00000462258.1

SF3A3-204, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-204ENST00000462258 ENDOVQ8N8Q3 282 aaKnown RBP9.81□□□□□ -0.84
SF3A3-204ENST00000462258 NAT8LQ8N9F0 302 aa9.81□□□□□ -0.84
SF3A3-204ENST00000462258 OR2L8Q8NGY9 312 aa9.81□□□□□ -0.84
SF3A3-204ENST00000462258 C9orf43Q8TAL5 461 aaPredicted RBP9.81□□□□□ -0.84
SF3A3-204ENST00000462258 FOPNLQ96NB1 174 aa9.81□□□□□ -0.84
SF3A3-204ENST00000462258 TCF12Q99081 682 aa9.81□□□□□ -0.84
SF3A3-204ENST00000462258 CHRNA10Q9GZZ6 450 aa9.81□□□□□ -0.84
SF3A3-204ENST00000462258 DDX47Q9H0S4 455 aaKnown RBP9.81□□□□□ -0.84
SF3A3-204ENST00000462258 FAM60AQ9NP50 221 aa9.81□□□□□ -0.84
SF3A3-204ENST00000462258 INTS10Q9NVR2 710 aaKnown RBP9.81□□□□□ -0.84
SF3A3-204ENST00000462258 IRAK4Q9NWZ3 460 aa9.81□□□□□ -0.84
SF3A3-204ENST00000462258 ASIC3Q9UHC3 531 aa9.81□□□□□ -0.84
SF3A3-204ENST00000462258 SERTAD3Q9UJW9 196 aa9.81□□□□□ -0.84
SF3A3-204ENST00000462258 SLC39A10Q9ULF5 831 aa9.81□□□□□ -0.84
SF3A3-204ENST00000462258 SNX7Q9UNH6 387 aa9.81□□□□□ -0.84
SF3A3-204ENST00000462258 CRYL1Q9Y2S2 319 aa9.81□□□□□ -0.84
SF3A3-204ENST00000462258 MRFAP1Q9Y605 127 aa9.81□□□□□ -0.84
SF3A3-204ENST00000462258 KCNMB2Q9Y691 235 aa9.81□□□□□ -0.84
SF3A3-204ENST00000462258 NFS1Q9Y697 457 aa9.81□□□□□ -0.84
SF3A3-204ENST00000462258 MAD1L1Q9Y6D9 718 aa9.81□□□□□ -0.84
SF3A3-204ENST00000462258 ZCWPW2A0A1B0GU75 182 aa9.8□□□□□ -0.84
SF3A3-204ENST00000462258 MAGEB16A2A368 324 aa9.8□□□□□ -0.84
SF3A3-204ENST00000462258 CTAGE9A4FU28 777 aa9.8□□□□□ -0.84
SF3A3-204ENST00000462258 KRT87PA6NCN2 255 aa9.8□□□□□ -0.84
SF3A3-204ENST00000462258 C9J4A7 227 aa9.8□□□□□ -0.84
SF3A3-204ENST00000462258 ZSCAN9O15535 394 aaPredicted RBP9.8□□□□□ -0.84
SF3A3-204ENST00000462258 ZNF749O43361 778 aa9.8□□□□□ -0.84
SF3A3-204ENST00000462258 HCRTR1O43613 425 aa9.8□□□□□ -0.84
SF3A3-204ENST00000462258 RFPL1O75677 317 aa9.8□□□□□ -0.84
SF3A3-204ENST00000462258 OR2B3O76000 313 aa9.8□□□□□ -0.84
SF3A3-204ENST00000462258 USP1O94782 785 aa9.8□□□□□ -0.84
SF3A3-204ENST00000462258 C1orf105O95561 183 aa9.8□□□□□ -0.84
SF3A3-204ENST00000462258 S1PR4O95977 384 aa9.8□□□□□ -0.84
SF3A3-204ENST00000462258 RECKO95980 971 aa9.8□□□□□ -0.84
SF3A3-204ENST00000462258 F7P08709 466 aaPredicted RBP9.8□□□□□ -0.84
SF3A3-204ENST00000462258 HBQ1P09105 142 aa9.8□□□□□ -0.84
SF3A3-204ENST00000462258 PKMP14618 531 aaKnown RBP9.8□□□□□ -0.84
SF3A3-204ENST00000462258 CHRM3P20309 590 aa9.8□□□□□ -0.84
SF3A3-204ENST00000462258 CCNFP41002 786 aa9.8□□□□□ -0.84
SF3A3-204ENST00000462258 SLC1A2P43004 574 aa9.8□□□□□ -0.84
SF3A3-204ENST00000462258 GABRA4P48169 554 aa9.8□□□□□ -0.84
SF3A3-204ENST00000462258 PMS2P54278 862 aa9.8□□□□□ -0.84
SF3A3-204ENST00000462258 THOC5Q13769 683 aaKnown RBP9.8□□□□□ -0.84
SF3A3-204ENST00000462258 PTK6Q13882 451 aa9.8□□□□□ -0.84
SF3A3-204ENST00000462258 GBX1Q14549 363 aa9.8□□□□□ -0.84
SF3A3-204ENST00000462258 NCF4Q15080 339 aa9.8□□□□□ -0.84
SF3A3-204ENST00000462258 UGT8Q16880 541 aa9.8□□□□□ -0.84
SF3A3-204ENST00000462258 CCSMST1Q4G0I0 132 aa9.8□□□□□ -0.84
SF3A3-204ENST00000462258 RNASEH2BQ5TBB1 312 aaKnown RBP9.8□□□□□ -0.84
SF3A3-204ENST00000462258 LCN10Q6JVE6 187 aa9.8□□□□□ -0.84
SF3A3-204ENST00000462258 DENND6AQ8IWF6 608 aa9.8□□□□□ -0.84
SF3A3-204ENST00000462258 FAM20CQ8IXL6 584 aa9.8□□□□□ -0.84
SF3A3-204ENST00000462258 AGGF1Q8N302 714 aaeCLIP9.8□□□□□ -0.84
SF3A3-204ENST00000462258 C2orf73Q8N5S3 287 aaPredicted RBP9.8□□□□□ -0.84
SF3A3-204ENST00000462258 ZBTB2Q8N680 514 aa9.8□□□□□ -0.84
SF3A3-204ENST00000462258 LMNTD1Q8N9Z9 388 aa9.8□□□□□ -0.84
SF3A3-204ENST00000462258 RAD51AP1Q96B01 352 aa9.8□□□□□ -0.84
SF3A3-204ENST00000462258 SLC22A18Q96BI1 424 aa9.8□□□□□ -0.84
SF3A3-204ENST00000462258 PDLIM2Q96JY6 352 aa9.8□□□□□ -0.84
SF3A3-204ENST00000462258 DPH2Q9BQC3 489 aaPredicted RBP9.8□□□□□ -0.84
SF3A3-204ENST00000462258 FBXO6Q9NRD1 293 aaPredicted RBP9.8□□□□□ -0.84
SF3A3-204ENST00000462258 SPATA7Q9P0W8 599 aa9.8□□□□□ -0.84
SF3A3-204ENST00000462258 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.8□□□□□ -0.84
SF3A3-204ENST00000462258 PCM1Q15154 2024 aa9.79□□□□□ -0.84
SF3A3-204ENST00000462258 H3BMH7 237 aa9.79□□□□□ -0.84
SF3A3-204ENST00000462258 PYCARD-AS1I3L0S3 204 aa9.79□□□□□ -0.84
SF3A3-204ENST00000462258 DNALI1O14645 258 aaPredicted RBP9.79□□□□□ -0.84
SF3A3-204ENST00000462258 CTSBP07858 339 aa9.79□□□□□ -0.84
SF3A3-204ENST00000462258 RAB40ALP0C0E4 278 aa9.79□□□□□ -0.84
SF3A3-204ENST00000462258 AGXTP21549 392 aa9.79□□□□□ -0.84
SF3A3-204ENST00000462258 PSMB5P28074 263 aa9.79□□□□□ -0.84
SF3A3-204ENST00000462258 CRYMQ14894 314 aa9.79□□□□□ -0.84
SF3A3-204ENST00000462258 LONRF1Q17RB8 773 aa9.79□□□□□ -0.84
SF3A3-204ENST00000462258 TTLL9Q3SXZ7 439 aa9.79□□□□□ -0.84
SF3A3-204ENST00000462258 LACTB2Q53H82 288 aaPredicted RBP9.79□□□□□ -0.84
SF3A3-204ENST00000462258 ACSBG2Q5FVE4 666 aa9.79□□□□□ -0.84
SF3A3-204ENST00000462258 EEF1AKMT2Q5JPI9 291 aaKnown RBP9.79□□□□□ -0.84
SF3A3-204ENST00000462258 ZNF385CQ66K41 422 aaPredicted RBP9.79□□□□□ -0.84
SF3A3-204ENST00000462258 CPZQ66K79 652 aa9.79□□□□□ -0.84
SF3A3-204ENST00000462258 RHBDD2Q6NTF9 364 aa9.79□□□□□ -0.84
SF3A3-204ENST00000462258 ATG14Q6ZNE5 492 aa9.79□□□□□ -0.84
SF3A3-204ENST00000462258 PTRH1Q86Y79 214 aaKnown RBP9.79□□□□□ -0.84
SF3A3-204ENST00000462258 LMNTD2Q8IXW0 634 aa9.79□□□□□ -0.84
SF3A3-204ENST00000462258 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.79□□□□□ -0.84
SF3A3-204ENST00000462258 GIMAP7Q8NHV1 300 aa9.79□□□□□ -0.84
SF3A3-204ENST00000462258 PROKR1Q8TCW9 393 aa9.79□□□□□ -0.84
SF3A3-204ENST00000462258 MAGEC3Q8TD91 643 aa9.79□□□□□ -0.84
SF3A3-204ENST00000462258 DENND1AQ8TEH3 1009 aa9.79□□□□□ -0.84
SF3A3-204ENST00000462258 THAP4Q8WY91 577 aa9.79□□□□□ -0.84
SF3A3-204ENST00000462258 SLCO2A1Q92959 643 aa9.79□□□□□ -0.84
SF3A3-204ENST00000462258 ABHD17AQ96GS6 310 aa9.79□□□□□ -0.84
SF3A3-204ENST00000462258 CAPZA3Q96KX2 299 aa9.79□□□□□ -0.84
SF3A3-204ENST00000462258 FAM167BQ9BTA0 163 aa9.79□□□□□ -0.84
SF3A3-204ENST00000462258 NLNQ9BYT8 704 aa9.79□□□□□ -0.84
SF3A3-204ENST00000462258 TRIM4Q9C037 500 aa9.79□□□□□ -0.84
SF3A3-204ENST00000462258 CCDC68Q9H2F9 335 aa9.79□□□□□ -0.84
SF3A3-204ENST00000462258 ZNF71Q9NQZ8 489 aaPredicted RBP9.79□□□□□ -0.84
SF3A3-204ENST00000462258 C20orf96Q9NUD7 363 aaPredicted RBP9.79□□□□□ -0.84
SF3A3-204ENST00000462258 TXLNGQ9NUQ3 528 aa9.79□□□□□ -0.84
SF3A3-204ENST00000462258 INTS7Q9NVH2 962 aaKnown RBP9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms