RNA–Protein interactions for RNA: ENST00000460333.5

VPS13D-202, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2

Gene VPS13D, Length 4,910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-202ENST00000460333 DLGAP1O14490 977 aa6.07□□□□□ -1.44
VPS13D-202ENST00000460333 PGRMC2O15173 223 aa6.07□□□□□ -1.44
VPS13D-202ENST00000460333 ADAMDEC1O15204 470 aa6.07□□□□□ -1.44
VPS13D-202ENST00000460333 IGHA2P01877 340 aa6.07□□□□□ -1.44
VPS13D-202ENST00000460333 CHRNGP07510 517 aa6.07□□□□□ -1.44
VPS13D-202ENST00000460333 ALDH4A1P30038 563 aa6.07□□□□□ -1.44
VPS13D-202ENST00000460333 RCVRNP35243 200 aa6.07□□□□□ -1.44
VPS13D-202ENST00000460333 MAZP56270 477 aaKnown RBP6.07□□□□□ -1.44
VPS13D-202ENST00000460333 PITX1P78337 314 aaPredicted RBP6.07□□□□□ -1.44
VPS13D-202ENST00000460333 PITPNAQ00169 270 aa6.07□□□□□ -1.44
VPS13D-202ENST00000460333 CD83Q01151 205 aa6.07□□□□□ -1.44
VPS13D-202ENST00000460333 GSTM4Q03013 218 aa6.07□□□□□ -1.44
VPS13D-202ENST00000460333 SLC10A2Q12908 348 aaPredicted RBP6.07□□□□□ -1.44
VPS13D-202ENST00000460333 PRSS55Q6UWB4 352 aaPredicted RBP6.07□□□□□ -1.44
VPS13D-202ENST00000460333 ZNF621Q6ZSS3 439 aa6.07□□□□□ -1.44
VPS13D-202ENST00000460333 CHERPQ8IWX8 916 aaKnown RBP6.07□□□□□ -1.44
VPS13D-202ENST00000460333 CMTR2Q8IYT2 770 aaKnown RBP6.07□□□□□ -1.44
VPS13D-202ENST00000460333 ZNF461Q8TAF7 563 aa6.07□□□□□ -1.44
VPS13D-202ENST00000460333 GPR152Q8TDT2 470 aa6.07□□□□□ -1.44
VPS13D-202ENST00000460333 PHF10Q8WUB8 498 aaKnown RBP6.07□□□□□ -1.44
VPS13D-202ENST00000460333 ZNF599Q96NL3 588 aa6.07□□□□□ -1.44
VPS13D-202ENST00000460333 FEM1AQ9BSK4 669 aa6.07□□□□□ -1.44
VPS13D-202ENST00000460333 SLC39A8Q9C0K1 460 aa6.07□□□□□ -1.44
VPS13D-202ENST00000460333 MKRN2Q9H000 416 aaKnown RBP6.07□□□□□ -1.44
VPS13D-202ENST00000460333 RPF2Q9H7B2 306 aaKnown RBP6.07□□□□□ -1.44
VPS13D-202ENST00000460333 CD93Q9NPY3 652 aa6.07□□□□□ -1.44
VPS13D-202ENST00000460333 DNAJC11Q9NVH1 559 aa6.07□□□□□ -1.44
VPS13D-202ENST00000460333 MTPAPQ9NVV4 582 aaKnown RBP eCLIP6.07□□□□□ -1.44
VPS13D-202ENST00000460333 CLDND1Q9NY35 253 aa6.07□□□□□ -1.44
VPS13D-202ENST00000460333 SEC14L4Q9UDX3 406 aa6.07□□□□□ -1.44
VPS13D-202ENST00000460333 TESMINQ9Y4I5 508 aa6.07□□□□□ -1.44
VPS13D-202ENST00000460333 NME7Q9Y5B8 376 aa6.07□□□□□ -1.44
VPS13D-202ENST00000460333 HS3ST4Q9Y661 456 aa6.07□□□□□ -1.44
VPS13D-202ENST00000460333 DOCK3Q8IZD9 2030 aa6.07□□□□□ -1.44
VPS13D-202ENST00000460333 HHLA1C9JL84 531 aa6.07□□□□□ -1.44
VPS13D-202ENST00000460333 AP2A2O94973 939 aa6.07□□□□□ -1.44
VPS13D-202ENST00000460333 ITGB1P05556 798 aa6.07□□□□□ -1.44
VPS13D-202ENST00000460333 GSTM1P09488 218 aa6.07□□□□□ -1.44
VPS13D-202ENST00000460333 LINC00032P0C843 101 aa6.07□□□□□ -1.44
VPS13D-202ENST00000460333 BMP2P12643 396 aa6.07□□□□□ -1.44
VPS13D-202ENST00000460333 STOMP27105 288 aa6.07□□□□□ -1.44
VPS13D-202ENST00000460333 SLC6A4P31645 630 aa6.07□□□□□ -1.44
VPS13D-202ENST00000460333 FEN1P39748 380 aaKnown RBP6.07□□□□□ -1.44
VPS13D-202ENST00000460333 PBX3P40426 434 aa6.07□□□□□ -1.44
VPS13D-202ENST00000460333 SPIBQ01892 262 aa6.07□□□□□ -1.44
VPS13D-202ENST00000460333 ANKDD1AQ495B1 522 aa6.07□□□□□ -1.44
VPS13D-202ENST00000460333 AGAP7PQ5VUJ5 663 aa6.07□□□□□ -1.44
VPS13D-202ENST00000460333 FAM122CQ6P4D5 195 aa6.07□□□□□ -1.44
VPS13D-202ENST00000460333 LINC00299Q6ZSB3 139 aa6.07□□□□□ -1.44
VPS13D-202ENST00000460333 GET4Q7L5D6 327 aaPredicted RBP6.07□□□□□ -1.44
VPS13D-202ENST00000460333 IGFN1Q86VF2 1251 aa6.07□□□□□ -1.44
VPS13D-202ENST00000460333 SYT12Q8IV01 421 aa6.07□□□□□ -1.44
VPS13D-202ENST00000460333 RGL4Q8IZJ4 473 aa6.07□□□□□ -1.44
VPS13D-202ENST00000460333 SLC34A3Q8N130 599 aa6.07□□□□□ -1.44
VPS13D-202ENST00000460333 GLB1L3Q8NCI6 653 aaPredicted RBP6.07□□□□□ -1.44
VPS13D-202ENST00000460333 LRRN4Q8WUT4 740 aa6.07□□□□□ -1.44
VPS13D-202ENST00000460333 DNAJA4Q8WW22 397 aaPredicted RBP6.07□□□□□ -1.44
VPS13D-202ENST00000460333 SMG7Q92540 1137 aaKnown RBP6.07□□□□□ -1.44
VPS13D-202ENST00000460333 ERLEC1Q96DZ1 483 aa6.07□□□□□ -1.44
VPS13D-202ENST00000460333 ASAH2Q9NR71 780 aa6.07□□□□□ -1.44
VPS13D-202ENST00000460333 RDH8Q9NYR8 311 aa6.07□□□□□ -1.44
VPS13D-202ENST00000460333 HSFX1Q9UBD0 423 aa6.07□□□□□ -1.44
VPS13D-202ENST00000460333 HSPE1-MOB4S4R3N1 261 aa6.07□□□□□ -1.44
VPS13D-202ENST00000460333 ZSWIM8A7E2V4 1837 aa6.07□□□□□ -1.44
VPS13D-202ENST00000460333 TRAV19A0A0A6YYK7 116 aa6.07□□□□□ -1.44
VPS13D-202ENST00000460333 LOC100130705A0A1B0GUX0 176 aa6.07□□□□□ -1.44
VPS13D-202ENST00000460333 AQP9O43315 295 aa6.07□□□□□ -1.44
VPS13D-202ENST00000460333 FGF1P05230 155 aa6.07□□□□□ -1.44
VPS13D-202ENST00000460333 CHRNB1P11230 501 aa6.07□□□□□ -1.44
VPS13D-202ENST00000460333 PSKH1P11801 424 aa6.07□□□□□ -1.44
VPS13D-202ENST00000460333 OGNP20774 298 aaKnown RBP6.07□□□□□ -1.44
VPS13D-202ENST00000460333 TCEA1P23193 301 aaKnown RBP6.07□□□□□ -1.44
VPS13D-202ENST00000460333 HTR2BP41595 481 aa6.07□□□□□ -1.44
VPS13D-202ENST00000460333 KCNJ8Q15842 424 aa6.07□□□□□ -1.44
VPS13D-202ENST00000460333 MSS51Q4VC12 460 aa6.07□□□□□ -1.44
VPS13D-202ENST00000460333 ANXA8L1Q5VT79 327 aa6.07□□□□□ -1.44
VPS13D-202ENST00000460333 PLPP4Q5VZY2 271 aa6.07□□□□□ -1.44
VPS13D-202ENST00000460333 HMBOX1Q6NT76 420 aa6.07□□□□□ -1.44
VPS13D-202ENST00000460333 SYVN1Q86TM6 617 aa6.07□□□□□ -1.44
VPS13D-202ENST00000460333 DENND1CQ8IV53 801 aa6.07□□□□□ -1.44
VPS13D-202ENST00000460333 CARNMT1Q8N4J0 409 aa6.07□□□□□ -1.44
VPS13D-202ENST00000460333 SPERTQ8NA61 448 aa6.07□□□□□ -1.44
VPS13D-202ENST00000460333 ABHD11Q8NFV4 315 aa6.07□□□□□ -1.44
VPS13D-202ENST00000460333 SETD6Q8TBK2 473 aa6.07□□□□□ -1.44
VPS13D-202ENST00000460333 SH3KBP1Q96B97 665 aa6.07□□□□□ -1.44
VPS13D-202ENST00000460333 SHDQ96IW2 340 aa6.07□□□□□ -1.44
VPS13D-202ENST00000460333 KCNS3Q9BQ31 491 aa6.07□□□□□ -1.44
VPS13D-202ENST00000460333 RTP3Q9BQQ7 232 aa6.07□□□□□ -1.44
VPS13D-202ENST00000460333 GON7Q9BXV9 100 aa6.07□□□□□ -1.44
VPS13D-202ENST00000460333 BRD9Q9H8M2 597 aa6.07□□□□□ -1.44
VPS13D-202ENST00000460333 TMEM248Q9NWD8 314 aa6.07□□□□□ -1.44
VPS13D-202ENST00000460333 PIH1D1Q9NWS0 290 aaKnown RBP6.07□□□□□ -1.44
VPS13D-202ENST00000460333 TAS2R9Q9NYW1 312 aa6.07□□□□□ -1.44
VPS13D-202ENST00000460333 NUP50Q9UKX7 468 aa6.07□□□□□ -1.44
VPS13D-202ENST00000460333 RNF6Q9Y252 685 aa6.07□□□□□ -1.44
VPS13D-202ENST00000460333 BTRCQ9Y297 605 aa6.07□□□□□ -1.44
VPS13D-202ENST00000460333 NCKAP1Q9Y2A7 1128 aa6.07□□□□□ -1.44
VPS13D-202ENST00000460333 HSPB11Q9Y547 144 aa6.07□□□□□ -1.44
VPS13D-202ENST00000460333 CPQQ9Y646 472 aa6.07□□□□□ -1.44
VPS13D-202ENST00000460333 PLOD2O00469 737 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms