RNA–Protein interactions for RNA: ENST00000460265.5

LMNB1-203, Transcript of lamin B1, humanhuman

TSL 1 (best)

Gene LMNB1, Length 3,475 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-203ENST00000460265 CNKSR3Q6P9H4 555 aa15.06■□□□□ 0
LMNB1-203ENST00000460265 RFPL4BQ6ZWI9 263 aa15.06■□□□□ 0
LMNB1-203ENST00000460265 CHSY3Q70JA7 882 aa15.06■□□□□ 0
LMNB1-203ENST00000460265 AKAP14Q86UN6 197 aa15.06■□□□□ 0
LMNB1-203ENST00000460265 HEATR4Q86WZ0 1026 aa15.06■□□□□ 0
LMNB1-203ENST00000460265 ZCCHC7Q8N3Z6 543 aaKnown RBP15.06■□□□□ 0
LMNB1-203ENST00000460265 LIX1Q8N485 282 aa15.06■□□□□ 0
LMNB1-203ENST00000460265 C2orf73Q8N5S3 287 aaPredicted RBP15.06■□□□□ 0
LMNB1-203ENST00000460265 AURKBQ96GD4 344 aaPredicted RBP15.06■□□□□ 0
LMNB1-203ENST00000460265 NANOGQ9H9S0 305 aa15.06■□□□□ 0
LMNB1-203ENST00000460265 NUDT4Q9NZJ9 180 aa15.06■□□□□ 0
LMNB1-203ENST00000460265 CCL26Q9Y258 94 aa15.06■□□□□ 0
LMNB1-203ENST00000460265 GLUD1P00367 558 aa15.06■□□□□ 0
LMNB1-203ENST00000460265 NTRK1P04629 796 aa15.06■□□□□ 0
LMNB1-203ENST00000460265 ABCB1P08183 1280 aaPredicted RBP15.06■□□□□ 0
LMNB1-203ENST00000460265 IDUAP35475 653 aa15.06■□□□□ 0
LMNB1-203ENST00000460265 ZXDBP98169 803 aa15.06■□□□□ 0
LMNB1-203ENST00000460265 TIAL1Q01085 375 aaKnown RBP eCLIP15.06■□□□□ 02e-6■■■■□ 21.1
LMNB1-203ENST00000460265 TMTC4Q5T4D3 741 aa15.06■□□□□ 0
LMNB1-203ENST00000460265 Q6ZVL8 140 aa15.06■□□□□ 0
LMNB1-203ENST00000460265 TTC30BQ8N4P2 665 aa15.06■□□□□ 0
LMNB1-203ENST00000460265 CHST14Q8NCH0 376 aa15.06■□□□□ 0
LMNB1-203ENST00000460265 OR2T11Q8NH01 316 aa15.06■□□□□ 0
LMNB1-203ENST00000460265 PNPT1Q8TCS8 783 aaKnown RBP15.06■□□□□ 0
LMNB1-203ENST00000460265 WRAP53Q9BUR4 548 aaKnown RBP15.06■□□□□ 0
LMNB1-203ENST00000460265 CWH43Q9H720 699 aa15.06■□□□□ 0
LMNB1-203ENST00000460265 BRD9Q9H8M2 597 aa15.06■□□□□ 0
LMNB1-203ENST00000460265 FKBP9O95302 570 aa15.05■□□□□ 0
LMNB1-203ENST00000460265 ALBP02768 609 aa15.05■□□□□ 0
LMNB1-203ENST00000460265 FGF4P08620 206 aa15.05■□□□□ 0
LMNB1-203ENST00000460265 GNPDA1P46926 289 aa15.05■□□□□ 0
LMNB1-203ENST00000460265 IST1P53990 364 aa15.05■□□□□ 0
LMNB1-203ENST00000460265 ST8SIA6P61647 398 aa15.05■□□□□ 0
LMNB1-203ENST00000460265 YBX1P67809 324 aaKnown RBP15.05■□□□□ 0
LMNB1-203ENST00000460265 PRKCQQ04759 706 aa15.05■□□□□ 0
LMNB1-203ENST00000460265 GALNT1Q10472 559 aaPredicted RBP15.05■□□□□ 0
LMNB1-203ENST00000460265 STARD3Q14849 445 aa15.05■□□□□ 0
LMNB1-203ENST00000460265 BLOC1S3Q6QNY0 202 aa15.05■□□□□ 0
LMNB1-203ENST00000460265 FKBP9P1Q75LS8 142 aa15.05■□□□□ 0
LMNB1-203ENST00000460265 SFRP1Q8N474 314 aa15.05■□□□□ 0
LMNB1-203ENST00000460265 GPR26Q8NDV2 337 aa15.05■□□□□ 0
LMNB1-203ENST00000460265 ADI1Q9BV57 179 aa15.05■□□□□ 0
LMNB1-203ENST00000460265 EBPLQ9BY08 206 aa15.05■□□□□ 0
LMNB1-203ENST00000460265 MAGEE1Q9HCI5 957 aa15.05■□□□□ 0
LMNB1-203ENST00000460265 SMOXQ9NWM0 555 aa15.05■□□□□ 0
LMNB1-203ENST00000460265 SOCS2O14508 198 aa15.05■□□□□ -0
LMNB1-203ENST00000460265 ASNA1O43681 348 aa15.05■□□□□ -0
LMNB1-203ENST00000460265 OXTRP30559 389 aa15.05■□□□□ -0
LMNB1-203ENST00000460265 CTNNB1P35222 781 aa15.05■□□□□ -0
LMNB1-203ENST00000460265 IRF8Q02556 426 aa15.05■□□□□ -0
LMNB1-203ENST00000460265 RAB33AQ14088 237 aa15.05■□□□□ -0
LMNB1-203ENST00000460265 SLC39A11Q8N1S5 342 aa15.05■□□□□ -0
LMNB1-203ENST00000460265 KRTCAP2Q8N6L1 136 aa15.05■□□□□ -0
LMNB1-203ENST00000460265 MCOLN3Q8TDD5 553 aa15.05■□□□□ -0
LMNB1-203ENST00000460265 TFAP2CQ92754 450 aa15.05■□□□□ -0
LMNB1-203ENST00000460265 EID2BQ96D98 161 aa15.05■□□□□ -0
LMNB1-203ENST00000460265 TCEAL4Q96EI5 215 aa15.05■□□□□ -0
LMNB1-203ENST00000460265 FAM120BQ96EK7 910 aaKnown RBP15.05■□□□□ -0
LMNB1-203ENST00000460265 MTERF1Q99551 399 aaKnown RBP15.05■□□□□ -0
LMNB1-203ENST00000460265 POPDC3Q9HBV1 291 aa15.05■□□□□ -0
LMNB1-203ENST00000460265 SDR39U1Q9NRG7 319 aaPredicted RBP15.05■□□□□ -0
LMNB1-203ENST00000460265 B4GALT6Q9UBX8 382 aa15.05■□□□□ -0
LMNB1-203ENST00000460265 FBXO9Q9UK97 447 aaPredicted RBP15.05■□□□□ -0
LMNB1-203ENST00000460265 PNMA8BQ9ULN7 279 aaPredicted RBP15.05■□□□□ -0
LMNB1-203ENST00000460265 MED16Q9Y2X0 877 aa15.05■□□□□ -0
LMNB1-203ENST00000460265 MYO16Q9Y6X6 1858 aa15.05■□□□□ -0
LMNB1-203ENST00000460265 ATG2BQ96BY7 2078 aa15.05■□□□□ -0
LMNB1-203ENST00000460265 EI24O14681 340 aa15.05■□□□□ -0
LMNB1-203ENST00000460265 CLK3P49761 638 aaKnown RBP15.05■□□□□ -0
LMNB1-203ENST00000460265 COPZ1P61923 177 aa15.05■□□□□ -0
LMNB1-203ENST00000460265 ACVR1Q04771 509 aa15.05■□□□□ -0
LMNB1-203ENST00000460265 AGAP7PQ5VUJ5 663 aa15.05■□□□□ -0
LMNB1-203ENST00000460265 ZNF621Q6ZSS3 439 aa15.05■□□□□ -0
LMNB1-203ENST00000460265 PHACTR4Q8IZ21 702 aa15.05■□□□□ -0
LMNB1-203ENST00000460265 ABHD11Q8NFV4 315 aa15.05■□□□□ -0
LMNB1-203ENST00000460265 HTRA1Q92743 480 aa15.05■□□□□ -0
LMNB1-203ENST00000460265 TOP1MTQ969P6 601 aa15.05■□□□□ -0
LMNB1-203ENST00000460265 SLC46A2Q9BY10 475 aa15.05■□□□□ -0
LMNB1-203ENST00000460265 LRTM1Q9HBL6 345 aa15.05■□□□□ -0
LMNB1-203ENST00000460265 PSME2Q9UL46 239 aa15.05■□□□□ -0
LMNB1-203ENST00000460265 SLC22A14Q9Y267 594 aa15.05■□□□□ -0
LMNB1-203ENST00000460265 DEAF1O75398 565 aaPredicted RBP15.04■□□□□ -0
LMNB1-203ENST00000460265 MATN1P21941 496 aa15.04■□□□□ -0
LMNB1-203ENST00000460265 S100A3P33764 101 aa15.04■□□□□ -0
LMNB1-203ENST00000460265 VAC14Q08AM6 782 aa15.04■□□□□ -0
LMNB1-203ENST00000460265 TEAD2Q15562 447 aa15.04■□□□□ -0
LMNB1-203ENST00000460265 SLC14A2Q15849 920 aa15.04■□□□□ -0
LMNB1-203ENST00000460265 ZNF284Q2VY69 593 aa15.04■□□□□ -0
LMNB1-203ENST00000460265 SPANXN4Q5MJ08 99 aa15.04■□□□□ -0
LMNB1-203ENST00000460265 LY6G5CQ5SRR4 150 aa15.04■□□□□ -0
LMNB1-203ENST00000460265 CYHR1Q6ZMK1 362 aa15.04■□□□□ -0
LMNB1-203ENST00000460265 GPR156Q8NFN8 814 aa15.04■□□□□ -0
LMNB1-203ENST00000460265 PIH1D2Q8WWB5 315 aa15.04■□□□□ -0
LMNB1-203ENST00000460265 PPP3R2Q96LZ3 170 aa15.04■□□□□ -0
LMNB1-203ENST00000460265 CHID1Q9BWS9 393 aa15.04■□□□□ -0
LMNB1-203ENST00000460265 CERS4Q9HA82 394 aa15.04■□□□□ -0
LMNB1-203ENST00000460265 FANCEQ9HB96 536 aa15.04■□□□□ -0
LMNB1-203ENST00000460265 STX16O14662 325 aa15.04■□□□□ -0
LMNB1-203ENST00000460265 ABLIM3O94929 683 aa15.04■□□□□ -0
LMNB1-203ENST00000460265 RPS17P08708 135 aaKnown RBP15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms