RNA–Protein interactions for RNA: ENST00000459947.5

UBR4-208, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 3,873 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-208ENST00000459947 FGF5P12034 268 aa10.35□□□□□ -0.75
UBR4-208ENST00000459947 ZNF37AP17032 561 aaPredicted RBP10.35□□□□□ -0.75
UBR4-208ENST00000459947 RBM20Q5T481 1227 aaKnown RBP10.35□□□□□ -0.75
UBR4-208ENST00000459947 KLC3Q6P597 504 aa10.35□□□□□ -0.75
UBR4-208ENST00000459947 CAPN12Q6ZSI9 719 aa10.35□□□□□ -0.75
UBR4-208ENST00000459947 B3GNT8Q7Z7M8 397 aa10.35□□□□□ -0.75
UBR4-208ENST00000459947 THAP11Q96EK4 314 aa10.35□□□□□ -0.75
UBR4-208ENST00000459947 NDNQ99608 321 aa10.35□□□□□ -0.75
UBR4-208ENST00000459947 HAUS8Q9BT25 410 aa10.35□□□□□ -0.75
UBR4-208ENST00000459947 MCMBPQ9BTE3 642 aa10.35□□□□□ -0.75
UBR4-208ENST00000459947 CAPS2Q9BXY5 557 aa10.35□□□□□ -0.75
UBR4-208ENST00000459947 SIDT1Q9NXL6 827 aaKnown RBP10.35□□□□□ -0.75
UBR4-208ENST00000459947 ARHGEF33A8MVX0 844 aa10.35□□□□□ -0.75
UBR4-208ENST00000459947 POLR1CO15160 346 aaPredicted RBP10.35□□□□□ -0.75
UBR4-208ENST00000459947 UGT2B7P16662 529 aa10.35□□□□□ -0.75
UBR4-208ENST00000459947 HNMTP50135 292 aa10.35□□□□□ -0.75
UBR4-208ENST00000459947 PNLIPRP1P54315 467 aa10.35□□□□□ -0.75
UBR4-208ENST00000459947 PRKG2Q13237 762 aa10.35□□□□□ -0.75
UBR4-208ENST00000459947 EMBQ6PCB8 327 aa10.35□□□□□ -0.75
UBR4-208ENST00000459947 FBXO38Q6PIJ6 1188 aa10.35□□□□□ -0.75
UBR4-208ENST00000459947 PAQR3Q6TCH7 311 aa10.35□□□□□ -0.75
UBR4-208ENST00000459947 TBC1D1Q86TI0 1168 aaPredicted RBP10.35□□□□□ -0.75
UBR4-208ENST00000459947 LMNTD1Q8N9Z9 388 aa10.35□□□□□ -0.75
UBR4-208ENST00000459947 SLC44A1Q8WWI5 657 aa10.35□□□□□ -0.75
UBR4-208ENST00000459947 N4BP2L2Q92802 583 aaPredicted RBP10.35□□□□□ -0.75
UBR4-208ENST00000459947 TMEM121BQ9BXQ6 578 aaPredicted RBP10.35□□□□□ -0.75
UBR4-208ENST00000459947 MED16Q9Y2X0 877 aa10.35□□□□□ -0.75
UBR4-208ENST00000459947 AP1M2Q9Y6Q5 423 aa10.35□□□□□ -0.75
UBR4-208ENST00000459947 MUC3AQ02505 3323 aa10.35□□□□□ -0.75
UBR4-208ENST00000459947 TXNDC9O14530 226 aa10.35□□□□□ -0.75
UBR4-208ENST00000459947 BRINP1O60477 761 aa10.35□□□□□ -0.75
UBR4-208ENST00000459947 MPOP05164 745 aa10.35□□□□□ -0.75
UBR4-208ENST00000459947 COL6A2P12110 1019 aa10.35□□□□□ -0.75
UBR4-208ENST00000459947 HOXB3P14651 431 aaPredicted RBP10.35□□□□□ -0.75
UBR4-208ENST00000459947 PRDX3P30048 256 aaKnown RBP10.35□□□□□ -0.75
UBR4-208ENST00000459947 BDKRB1P46663 353 aa10.35□□□□□ -0.75
UBR4-208ENST00000459947 GFERP55789 205 aa10.35□□□□□ -0.75
UBR4-208ENST00000459947 CFHR1Q03591 330 aa10.35□□□□□ -0.75
UBR4-208ENST00000459947 SNAP47Q5SQN1 464 aa10.35□□□□□ -0.75
UBR4-208ENST00000459947 CYHR1Q6ZMK1 362 aa10.35□□□□□ -0.75
UBR4-208ENST00000459947 FRA10AC1Q70Z53 315 aa10.35□□□□□ -0.75
UBR4-208ENST00000459947 CROCCP2Q86T23 111 aa10.35□□□□□ -0.75
UBR4-208ENST00000459947 GIMAP7Q8NHV1 300 aa10.35□□□□□ -0.75
UBR4-208ENST00000459947 DLG3Q92796 817 aa10.35□□□□□ -0.75
UBR4-208ENST00000459947 FBXL8Q96CD0 374 aa10.35□□□□□ -0.75
UBR4-208ENST00000459947 C17orf62Q9BQA9 187 aa10.35□□□□□ -0.75
UBR4-208ENST00000459947 SNX7Q9UNH6 387 aa10.35□□□□□ -0.75
UBR4-208ENST00000459947 BTN3A3O00478 584 aa10.34□□□□□ -0.75
UBR4-208ENST00000459947 MAPK10P53779 464 aa10.34□□□□□ -0.75
UBR4-208ENST00000459947 CDKN2DP55273 166 aa10.34□□□□□ -0.75
UBR4-208ENST00000459947 TAS2R39P59534 338 aa10.34□□□□□ -0.75
UBR4-208ENST00000459947 ZKSCAN8Q15776 578 aaPredicted RBP10.34□□□□□ -0.75
UBR4-208ENST00000459947 TSNAXIP1Q2TAA8 658 aa10.34□□□□□ -0.75
UBR4-208ENST00000459947 C19orf47Q8N9M1 422 aaKnown RBP10.34□□□□□ -0.75
UBR4-208ENST00000459947 CCDC177Q9NQR7 707 aaPredicted RBP10.34□□□□□ -0.75
UBR4-208ENST00000459947 SERTAD3Q9UJW9 196 aa10.34□□□□□ -0.75
UBR4-208ENST00000459947 SRPK3Q9UPE1 567 aa10.34□□□□□ -0.75
UBR4-208ENST00000459947 PLCL2Q9UPR0 1127 aa10.34□□□□□ -0.75
UBR4-208ENST00000459947 RP1P56715 2156 aa10.34□□□□□ -0.75
UBR4-208ENST00000459947 IQANK1A0A1B0GTG1 560 aa10.34□□□□□ -0.75
UBR4-208ENST00000459947 ANXA5P08758 320 aa10.34□□□□□ -0.75
UBR4-208ENST00000459947 LIPCP11150 499 aa10.34□□□□□ -0.75
UBR4-208ENST00000459947 ECHS1P30084 290 aa10.34□□□□□ -0.75
UBR4-208ENST00000459947 TCTE1Q5JU00 501 aa10.34□□□□□ -0.75
UBR4-208ENST00000459947 WDR93Q6P2C0 686 aa10.34□□□□□ -0.75
UBR4-208ENST00000459947 FAM92BQ6ZTR7 304 aa10.34□□□□□ -0.75
UBR4-208ENST00000459947 PPP1R3BQ86XI6 285 aa10.34□□□□□ -0.75
UBR4-208ENST00000459947 ESX1Q8N693 406 aa10.34□□□□□ -0.75
UBR4-208ENST00000459947 CNOT10Q9H9A5 744 aaKnown RBP10.34□□□□□ -0.75
UBR4-208ENST00000459947 ASCL3Q9NQ33 180 aa10.34□□□□□ -0.75
UBR4-208ENST00000459947 EXOC1LA0A1B0GW35 172 aa10.34□□□□□ -0.75
UBR4-208ENST00000459947 SYCE1LA8MT33 242 aa10.34□□□□□ -0.75
UBR4-208ENST00000459947 RASA2Q15283 850 aa10.34□□□□□ -0.75
UBR4-208ENST00000459947 CAPN13Q6MZZ7 669 aaPredicted RBP10.34□□□□□ -0.75
UBR4-208ENST00000459947 TLDC1Q6P9B6 456 aa10.34□□□□□ -0.75
UBR4-208ENST00000459947 FAM129CQ86XR2 697 aa10.34□□□□□ -0.75
UBR4-208ENST00000459947 HOMEZQ8IX15 550 aa10.34□□□□□ -0.75
UBR4-208ENST00000459947 KCNE4Q8WWG9 221 aa10.34□□□□□ -0.75
UBR4-208ENST00000459947 TRAPPC9Q96Q05 1148 aa10.34□□□□□ -0.75
UBR4-208ENST00000459947 MAP3K3Q99759 626 aa10.34□□□□□ -0.75
UBR4-208ENST00000459947 MIPEPQ99797 713 aa10.34□□□□□ -0.75
UBR4-208ENST00000459947 DPH2Q9BQC3 489 aaPredicted RBP10.34□□□□□ -0.75
UBR4-208ENST00000459947 KLHL3Q9UH77 587 aa10.34□□□□□ -0.75
UBR4-208ENST00000459947 ACOT9Q9Y305 439 aa10.34□□□□□ -0.75
UBR4-208ENST00000459947 CYP4F3Q08477 520 aa10.33□□□□□ -0.75
UBR4-208ENST00000459947 TUBB3Q13509 450 aa10.33□□□□□ -0.75
UBR4-208ENST00000459947 GRB7Q14451 532 aa10.33□□□□□ -0.75
UBR4-208ENST00000459947 FAM83EQ2M2I3 478 aa10.33□□□□□ -0.75
UBR4-208ENST00000459947 LCTLQ6UWM7 567 aa10.33□□□□□ -0.75
UBR4-208ENST00000459947 SYTL1Q8IYJ3 562 aa10.33□□□□□ -0.75
UBR4-208ENST00000459947 GPR135Q8IZ08 494 aa10.33□□□□□ -0.75
UBR4-208ENST00000459947 RIBC1Q8N443 379 aaPredicted RBP10.33□□□□□ -0.75
UBR4-208ENST00000459947 BMPERQ8N8U9 685 aa10.33□□□□□ -0.75
UBR4-208ENST00000459947 NAT14Q8WUY8 206 aa10.33□□□□□ -0.75
UBR4-208ENST00000459947 EEF1AKMT1Q8WVE0 214 aa10.33□□□□□ -0.75
UBR4-208ENST00000459947 PRR11Q96HE9 360 aaPredicted RBP10.33□□□□□ -0.75
UBR4-208ENST00000459947 LRFN5Q96NI6 719 aa10.33□□□□□ -0.75
UBR4-208ENST00000459947 OR2A14Q96R47 310 aa10.33□□□□□ -0.75
UBR4-208ENST00000459947 SMYD2Q9NRG4 433 aa10.33□□□□□ -0.75
UBR4-208ENST00000459947 ENAMQ9NRM1 1142 aa10.33□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms