RNA–Protein interactions for RNA: ENST00000458530.1

VPS50-207, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-207ENST00000458530 CCR5P51681 352 aa8.72□□□□□ -1.01
VPS50-207ENST00000458530 MNAT1P51948 309 aa8.72□□□□□ -1.01
VPS50-207ENST00000458530 CCNG1P51959 295 aa8.72□□□□□ -1.01
VPS50-207ENST00000458530 HK3P52790 923 aa8.72□□□□□ -1.01
VPS50-207ENST00000458530 KIAA1024LP59773 190 aa8.72□□□□□ -1.01
VPS50-207ENST00000458530 BNIP1Q12981 228 aa8.72□□□□□ -1.01
VPS50-207ENST00000458530 GTF2H2Q13888 395 aa8.72□□□□□ -1.01
VPS50-207ENST00000458530 INPP5AQ14642 412 aa8.72□□□□□ -1.01
VPS50-207ENST00000458530 CCDC6Q16204 474 aa8.72□□□□□ -1.01
VPS50-207ENST00000458530 PDCD2Q16342 344 aaPredicted RBP8.72□□□□□ -1.01
VPS50-207ENST00000458530 ZNF648Q5T619 568 aaPredicted RBP8.72□□□□□ -1.01
VPS50-207ENST00000458530 GTF2H2CQ6P1K8 395 aa8.72□□□□□ -1.01
VPS50-207ENST00000458530 DOK6Q6PKX4 331 aa8.72□□□□□ -1.01
VPS50-207ENST00000458530 CRTC3Q6UUV7 619 aa8.72□□□□□ -1.01
VPS50-207ENST00000458530 CEP68Q76N32 757 aa8.72□□□□□ -1.01
VPS50-207ENST00000458530 TRIM74Q86UV6 250 aa8.72□□□□□ -1.01
VPS50-207ENST00000458530 GALNT13Q8IUC8 556 aa8.72□□□□□ -1.01
VPS50-207ENST00000458530 RAB42Q8N4Z0 105 aa8.72□□□□□ -1.01
VPS50-207ENST00000458530 FITM2Q8N6M3 262 aa8.72□□□□□ -1.01
VPS50-207ENST00000458530 BEND7Q8N7W2 519 aaPredicted RBP8.72□□□□□ -1.01
VPS50-207ENST00000458530 TSTD1Q8NFU3 115 aa8.72□□□□□ -1.01
VPS50-207ENST00000458530 CEP70Q8NHQ1 597 aa8.72□□□□□ -1.01
VPS50-207ENST00000458530 FAM174AQ8TBP5 190 aa8.72□□□□□ -1.01
VPS50-207ENST00000458530 ACTRT2Q8TDY3 377 aa8.72□□□□□ -1.01
VPS50-207ENST00000458530 TRPC4APQ8TEL6 797 aa8.72□□□□□ -1.01
VPS50-207ENST00000458530 AGAP11Q8TF27 550 aa8.72□□□□□ -1.01
VPS50-207ENST00000458530 FOXJ1Q92949 421 aa8.72□□□□□ -1.01
VPS50-207ENST00000458530 RHBDF1Q96CC6 855 aa8.72□□□□□ -1.01
VPS50-207ENST00000458530 FBXL8Q96CD0 374 aa8.72□□□□□ -1.01
VPS50-207ENST00000458530 CCDC138Q96M89 665 aa8.72□□□□□ -1.01
VPS50-207ENST00000458530 NUF2Q9BZD4 464 aa8.72□□□□□ -1.01
VPS50-207ENST00000458530 CD244Q9BZW8 370 aa8.72□□□□□ -1.01
VPS50-207ENST00000458530 SLC32A1Q9H598 525 aa8.72□□□□□ -1.01
VPS50-207ENST00000458530 MEAF6Q9HAF1 191 aa8.72□□□□□ -1.01
VPS50-207ENST00000458530 SEMA4BQ9NPR2 832 aaPredicted RBP8.72□□□□□ -1.01
VPS50-207ENST00000458530 ITM2CQ9NQX7 267 aa8.72□□□□□ -1.01
VPS50-207ENST00000458530 RIC8BQ9NVN3 520 aa8.72□□□□□ -1.01
VPS50-207ENST00000458530 ADAMTS6Q9UKP5 1117 aa8.72□□□□□ -1.01
VPS50-207ENST00000458530 IKZF3Q9UKT9 509 aa8.72□□□□□ -1.01
VPS50-207ENST00000458530 ACSL5Q9ULC5 683 aa8.72□□□□□ -1.01
VPS50-207ENST00000458530 SLC12A4Q9UP95 1085 aa8.72□□□□□ -1.01
VPS50-207ENST00000458530 PDE10AQ9Y233 779 aa8.72□□□□□ -1.01
VPS50-207ENST00000458530 LRP4O75096 1905 aa8.72□□□□□ -1.01
VPS50-207ENST00000458530 CEP192Q8TEP8 1941 aa8.72□□□□□ -1.01
VPS50-207ENST00000458530 ANTXRLA6NF34 631 aa8.71□□□□□ -1.02
VPS50-207ENST00000458530 CFAP73A6NFT4 308 aa8.71□□□□□ -1.02
VPS50-207ENST00000458530 ZNF195O14628 629 aa8.71□□□□□ -1.02
VPS50-207ENST00000458530 SKAP2O75563 359 aaPredicted RBP8.71□□□□□ -1.02
VPS50-207ENST00000458530 UNC5CO95185 931 aa8.71□□□□□ -1.02
VPS50-207ENST00000458530 SLC35G4P0C7Q5 338 aa8.71□□□□□ -1.02
VPS50-207ENST00000458530 EBLN1P0CF75 366 aa8.71□□□□□ -1.02
VPS50-207ENST00000458530 CEACAM1P13688 526 aa8.71□□□□□ -1.02
VPS50-207ENST00000458530 NCF2P19878 526 aaPredicted RBP8.71□□□□□ -1.02
VPS50-207ENST00000458530 CALB2P22676 271 aa8.71□□□□□ -1.02
VPS50-207ENST00000458530 CCND1P24385 295 aa8.71□□□□□ -1.02
VPS50-207ENST00000458530 PRDX6P30041 224 aa8.71□□□□□ -1.02
VPS50-207ENST00000458530 HMOX2P30519 316 aa8.71□□□□□ -1.02
VPS50-207ENST00000458530 IGFALSP35858 605 aa8.71□□□□□ -1.02
VPS50-207ENST00000458530 GGT5P36269 586 aa8.71□□□□□ -1.02
VPS50-207ENST00000458530 HSPA7P48741 367 aa8.71□□□□□ -1.02
VPS50-207ENST00000458530 CDH13P55290 713 aa8.71□□□□□ -1.02
VPS50-207ENST00000458530 STX1BP61266 288 aa8.71□□□□□ -1.02
VPS50-207ENST00000458530 YPEL5P62699 121 aa8.71□□□□□ -1.02
VPS50-207ENST00000458530 DMPKQ09013 629 aa8.71□□□□□ -1.02
VPS50-207ENST00000458530 MAPRE2Q15555 327 aa8.71□□□□□ -1.02
VPS50-207ENST00000458530 PHKG1Q16816 387 aa8.71□□□□□ -1.02
VPS50-207ENST00000458530 PLK5Q496M5 336 aa8.71□□□□□ -1.02
VPS50-207ENST00000458530 GALNTL6Q49A17 601 aa8.71□□□□□ -1.02
VPS50-207ENST00000458530 KANK2Q63ZY3 851 aa8.71□□□□□ -1.02
VPS50-207ENST00000458530 ZNF787Q6DD87 383 aa8.71□□□□□ -1.02
VPS50-207ENST00000458530 NXNQ6DKJ4 435 aa8.71□□□□□ -1.02
VPS50-207ENST00000458530 TCEAL6Q6IPX3 200 aa8.71□□□□□ -1.02
VPS50-207ENST00000458530 LPCAT2Q7L5N7 544 aa8.71□□□□□ -1.02
VPS50-207ENST00000458530 GOLGA7Q7Z5G4 137 aa8.71□□□□□ -1.02
VPS50-207ENST00000458530 PDZD3Q86UT5 571 aa8.71□□□□□ -1.02
VPS50-207ENST00000458530 FAM124AQ86V42 546 aa8.71□□□□□ -1.02
VPS50-207ENST00000458530 RETREG3Q86VR2 466 aa8.71□□□□□ -1.02
VPS50-207ENST00000458530 RASGRP3Q8IV61 690 aa8.71□□□□□ -1.02
VPS50-207ENST00000458530 CFAP206Q8IYR0 622 aa8.71□□□□□ -1.02
VPS50-207ENST00000458530 TEX9Q8N6V9 391 aa8.71□□□□□ -1.02
VPS50-207ENST00000458530 PLA2G15Q8NCC3 412 aa8.71□□□□□ -1.02
VPS50-207ENST00000458530 TWIST2Q8WVJ9 160 aa8.71□□□□□ -1.02
VPS50-207ENST00000458530 TCEAL3Q969E4 200 aa8.71□□□□□ -1.02
VPS50-207ENST00000458530 C19orf60Q96EN9 201 aa8.71□□□□□ -1.02
VPS50-207ENST00000458530 MAELQ96JY0 434 aaKnown RBP8.71□□□□□ -1.02
VPS50-207ENST00000458530 RAB3IPQ96QF0 476 aaPredicted RBP8.71□□□□□ -1.02
VPS50-207ENST00000458530 APOOQ9BUR5 198 aa8.71□□□□□ -1.02
VPS50-207ENST00000458530 SLC29A3Q9BZD2 475 aa8.71□□□□□ -1.02
VPS50-207ENST00000458530 SHCBP1LQ9BZQ2 653 aa8.71□□□□□ -1.02
VPS50-207ENST00000458530 PCED1AQ9H1Q7 454 aa8.71□□□□□ -1.02
VPS50-207ENST00000458530 SLC6A17Q9H1V8 727 aa8.71□□□□□ -1.02
VPS50-207ENST00000458530 SMOC1Q9H4F8 434 aa8.71□□□□□ -1.02
VPS50-207ENST00000458530 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.71□□□□□ -1.02
VPS50-207ENST00000458530 FAM8A1Q9UBU6 413 aa8.71□□□□□ -1.02
VPS50-207ENST00000458530 TRPS1Q9UHF7 1281 aa8.71□□□□□ -1.02
VPS50-207ENST00000458530 DMTF1Q9Y222 760 aa8.71□□□□□ -1.02
VPS50-207ENST00000458530 RRP15Q9Y3B9 282 aaKnown RBP8.71□□□□□ -1.02
VPS50-207ENST00000458530 FIS1Q9Y3D6 152 aa8.71□□□□□ -1.02
VPS50-207ENST00000458530 CAPN7Q9Y6W3 813 aa8.71□□□□□ -1.02
VPS50-207ENST00000458530 LOC400499M0QZD8 3231 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms