RNA–Protein interactions for RNA: ENST00000452973.6

VTA1-203, Transcript of vesicle trafficking 1, humanhuman

TSL 2 BASIC

Gene VTA1, Length 3,177 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-203ENST00000452973 WFIKKN2Q8TEU8 576 aa11.47□□□□□ -0.57
VTA1-203ENST00000452973 TIFAQ96CG3 184 aa11.47□□□□□ -0.57
VTA1-203ENST00000452973 AURKBQ96GD4 344 aaPredicted RBP11.47□□□□□ -0.57
VTA1-203ENST00000452973 APIPQ96GX9 242 aa11.47□□□□□ -0.57
VTA1-203ENST00000452973 LRIG1Q96JA1 1093 aa11.47□□□□□ -0.57
VTA1-203ENST00000452973 UBAP1Q9NZ09 502 aa11.47□□□□□ -0.57
VTA1-203ENST00000452973 KLHL42Q9P2K6 505 aa11.47□□□□□ -0.57
VTA1-203ENST00000452973 C15orf38-AP3S2A0A0A6YYH1 394 aa11.46□□□□□ -0.57
VTA1-203ENST00000452973 C7orf72A4D263 438 aa11.46□□□□□ -0.57
VTA1-203ENST00000452973 E7EQ34 232 aa11.46□□□□□ -0.57
VTA1-203ENST00000452973 KCNH1O95259 989 aa11.46□□□□□ -0.57
VTA1-203ENST00000452973 C6P13671 934 aa11.46□□□□□ -0.57
VTA1-203ENST00000452973 ZNF26P17031 533 aaPredicted RBP11.46□□□□□ -0.57
VTA1-203ENST00000452973 JAK1P23458 1154 aa11.46□□□□□ -0.57
VTA1-203ENST00000452973 FOXM1Q08050 763 aa11.46□□□□□ -0.57
VTA1-203ENST00000452973 MAD2L1Q13257 205 aaPredicted RBP11.46□□□□□ -0.57
VTA1-203ENST00000452973 GBX1Q14549 363 aa11.46□□□□□ -0.57
VTA1-203ENST00000452973 SHHQ15465 462 aa11.46□□□□□ -0.57
VTA1-203ENST00000452973 OR52E8Q6IFG1 317 aa11.46□□□□□ -0.57
VTA1-203ENST00000452973 ADNP2Q6IQ32 1131 aa11.46□□□□□ -0.57
VTA1-203ENST00000452973 TRMT11Q7Z4G4 463 aaKnown RBP11.46□□□□□ -0.57
VTA1-203ENST00000452973 ARPINQ7Z6K5 226 aa11.46□□□□□ -0.57
VTA1-203ENST00000452973 THOC6Q86W42 341 aaKnown RBP11.46□□□□□ -0.57
VTA1-203ENST00000452973 USP7Q93009 1102 aa11.46□□□□□ -0.57
VTA1-203ENST00000452973 BTBD9Q96Q07 612 aa11.46□□□□□ -0.57
VTA1-203ENST00000452973 CCM2Q9BSQ5 444 aa11.46□□□□□ -0.57
VTA1-203ENST00000452973 Q9H521 79 aa11.46□□□□□ -0.57
VTA1-203ENST00000452973 DKK3Q9UBP4 350 aa11.46□□□□□ -0.57
VTA1-203ENST00000452973 SOBPA7XYQ1 873 aa11.46□□□□□ -0.58
VTA1-203ENST00000452973 H3BM21 787 aa11.46□□□□□ -0.58
VTA1-203ENST00000452973 SPINT1O43278 529 aa11.46□□□□□ -0.58
VTA1-203ENST00000452973 SLCO2B1O94956 709 aa11.46□□□□□ -0.58
VTA1-203ENST00000452973 ADRB3P13945 408 aa11.46□□□□□ -0.58
VTA1-203ENST00000452973 SLC6A12P48065 614 aa11.46□□□□□ -0.58
VTA1-203ENST00000452973 GLYATQ6IB77 296 aa11.46□□□□□ -0.58
VTA1-203ENST00000452973 AGTRAPQ6RW13 159 aa11.46□□□□□ -0.58
VTA1-203ENST00000452973 TICAM1Q8IUC6 712 aa11.46□□□□□ -0.58
VTA1-203ENST00000452973 PHACTR4Q8IZ21 702 aa11.46□□□□□ -0.58
VTA1-203ENST00000452973 TCAIMQ8N3R3 496 aa11.46□□□□□ -0.58
VTA1-203ENST00000452973 C2orf73Q8N5S3 287 aaPredicted RBP11.46□□□□□ -0.58
VTA1-203ENST00000452973 OR10A6Q8NH74 314 aa11.46□□□□□ -0.58
VTA1-203ENST00000452973 SUSD6Q92537 303 aa11.46□□□□□ -0.58
VTA1-203ENST00000452973 FIG4Q92562 907 aa11.46□□□□□ -0.58
VTA1-203ENST00000452973 ZUFSPQ96AP4 578 aa11.46□□□□□ -0.58
VTA1-203ENST00000452973 NUS1Q96E22 293 aa11.46□□□□□ -0.58
VTA1-203ENST00000452973 DTD2Q96FN9 168 aa11.46□□□□□ -0.58
VTA1-203ENST00000452973 RNF145Q96MT1 663 aa11.46□□□□□ -0.58
VTA1-203ENST00000452973 RPF2Q9H7B2 306 aaKnown RBP11.46□□□□□ -0.58
VTA1-203ENST00000452973 CCM2LQ9NUG4 571 aaPredicted RBP11.46□□□□□ -0.58
VTA1-203ENST00000452973 SLC27A6Q9Y2P4 619 aa11.46□□□□□ -0.58
VTA1-203ENST00000452973 TMEM98Q9Y2Y6 226 aa11.46□□□□□ -0.58
VTA1-203ENST00000452973 ALPK3Q96L96 1907 aa11.45□□□□□ -0.58
VTA1-203ENST00000452973 TSPAN11A1L157 253 aa11.45□□□□□ -0.58
VTA1-203ENST00000452973 PRR23AA6NEV1 266 aa11.45□□□□□ -0.58
VTA1-203ENST00000452973 EIF3FO00303 357 aaPredicted RBP11.45□□□□□ -0.58
VTA1-203ENST00000452973 AP2A2O94973 939 aa11.45□□□□□ -0.58
VTA1-203ENST00000452973 PCNAP12004 261 aa11.45□□□□□ -0.58
VTA1-203ENST00000452973 AP1S2P56377 157 aa11.45□□□□□ -0.58
VTA1-203ENST00000452973 RPS14P62263 151 aaKnown RBP11.45□□□□□ -0.58
VTA1-203ENST00000452973 ELAVL3Q14576 367 aaKnown RBP11.45□□□□□ -0.58
VTA1-203ENST00000452973 STARD3Q14849 445 aa11.45□□□□□ -0.58
VTA1-203ENST00000452973 GAB4Q2WGN9 574 aa11.45□□□□□ -0.58
VTA1-203ENST00000452973 FRG2Q64ET8 278 aa11.45□□□□□ -0.58
VTA1-203ENST00000452973 LCN8Q6JVE9 175 aa11.45□□□□□ -0.58
VTA1-203ENST00000452973 SYTL1Q8IYJ3 562 aa11.45□□□□□ -0.58
VTA1-203ENST00000452973 SPDYE1Q8NFV5 336 aaPredicted RBP11.45□□□□□ -0.58
VTA1-203ENST00000452973 FRG2BQ96QU4 278 aa11.45□□□□□ -0.58
VTA1-203ENST00000452973 SLC29A3Q9BZD2 475 aa11.45□□□□□ -0.58
VTA1-203ENST00000452973 HPS4Q9NQG7 708 aa11.45□□□□□ -0.58
VTA1-203ENST00000452973 RNF103-CHMP3A0A140T963 221 aa11.45□□□□□ -0.58
VTA1-203ENST00000452973 EDDM13A0A1B0GTR0 161 aa11.45□□□□□ -0.58
VTA1-203ENST00000452973 AQP12BA6NM10 295 aa11.45□□□□□ -0.58
VTA1-203ENST00000452973 SOCS2O14508 198 aa11.45□□□□□ -0.58
VTA1-203ENST00000452973 PGM3O95394 542 aa11.45□□□□□ -0.58
VTA1-203ENST00000452973 CATP04040 527 aaKnown RBP11.45□□□□□ -0.58
VTA1-203ENST00000452973 GSTM1P09488 218 aa11.45□□□□□ -0.58
VTA1-203ENST00000452973 EFNA1P20827 205 aaPredicted RBP11.45□□□□□ -0.58
VTA1-203ENST00000452973 IL12RB1P42701 662 aa11.45□□□□□ -0.58
VTA1-203ENST00000452973 CHN2P52757 468 aa11.45□□□□□ -0.58
VTA1-203ENST00000452973 PLOD1Q02809 727 aaPredicted RBP11.45□□□□□ -0.58
VTA1-203ENST00000452973 GSTM4Q03013 218 aa11.45□□□□□ -0.58
VTA1-203ENST00000452973 PRKCQQ04759 706 aa11.45□□□□□ -0.58
VTA1-203ENST00000452973 PWP1Q13610 501 aa11.45□□□□□ -0.58
VTA1-203ENST00000452973 USP39Q53GS9 565 aaKnown RBP11.45□□□□□ -0.58
VTA1-203ENST00000452973 GCNT7Q6ZNI0 430 aa11.45□□□□□ -0.58
VTA1-203ENST00000452973 AQP12AQ8IXF9 295 aa11.45□□□□□ -0.58
VTA1-203ENST00000452973 GTF2H4Q92759 462 aa11.45□□□□□ -0.58
VTA1-203ENST00000452973 FOPNLQ96NB1 174 aa11.45□□□□□ -0.58
VTA1-203ENST00000452973 GBP5Q96PP8 586 aa11.45□□□□□ -0.58
VTA1-203ENST00000452973 FAM129BQ96TA1 746 aa11.45□□□□□ -0.58
VTA1-203ENST00000452973 IKZF5Q9H5V7 419 aa11.45□□□□□ -0.58
VTA1-203ENST00000452973 RAD18Q9NS91 495 aa11.45□□□□□ -0.58
VTA1-203ENST00000452973 SLC6A13Q9NSD5 602 aa11.45□□□□□ -0.58
VTA1-203ENST00000452973 STOX2Q9P2F5 926 aaPredicted RBP11.45□□□□□ -0.58
VTA1-203ENST00000452973 TCF3P15923 654 aa11.44□□□□□ -0.58
VTA1-203ENST00000452973 CD22P20273 847 aa11.44□□□□□ -0.58
VTA1-203ENST00000452973 FASP25445 335 aa11.44□□□□□ -0.58
VTA1-203ENST00000452973 PEX19P40855 299 aa11.44□□□□□ -0.58
VTA1-203ENST00000452973 SP140Q13342 867 aa11.44□□□□□ -0.58
VTA1-203ENST00000452973 DOC2AQ14183 400 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms