RNA–Protein interactions for RNA: ENST00000450148.5

MSH5-209, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 1,000 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-209ENST00000450148 ZBTB2Q8N680 514 aa11.9□□□□□ -0.5
MSH5-209ENST00000450148 CFAP61Q8NHU2 1237 aa11.9□□□□□ -0.5
MSH5-209ENST00000450148 DENND1AQ8TEH3 1009 aa11.9□□□□□ -0.5
MSH5-209ENST00000450148 PBKQ96KB5 322 aa11.9□□□□□ -0.5
MSH5-209ENST00000450148 DPH2Q9BQC3 489 aaPredicted RBP11.9□□□□□ -0.5
MSH5-209ENST00000450148 GALPQ9UBC7 116 aa11.9□□□□□ -0.5
MSH5-209ENST00000450148 SNX7Q9UNH6 387 aa11.9□□□□□ -0.5
MSH5-209ENST00000450148 RUVBL2Q9Y230 463 aaKnown RBP11.9□□□□□ -0.5
MSH5-209ENST00000450148 KLHL20Q9Y2M5 609 aa11.9□□□□□ -0.5
MSH5-209ENST00000450148 JRKLQ9Y4A0 524 aa11.9□□□□□ -0.5
MSH5-209ENST00000450148 DOCK10Q96BY6 2186 aa11.89□□□□□ -0.51
MSH5-209ENST00000450148 NBASA2RRP1 2371 aa11.89□□□□□ -0.51
MSH5-209ENST00000450148 ARGFXA6NJG6 315 aa11.89□□□□□ -0.51
MSH5-209ENST00000450148 MAP3K7O43318 606 aa11.89□□□□□ -0.51
MSH5-209ENST00000450148 KDM1AO60341 852 aa11.89□□□□□ -0.51
MSH5-209ENST00000450148 NIPSNAP2O75323 286 aa11.89□□□□□ -0.51
MSH5-209ENST00000450148 NDUFS3O75489 264 aa11.89□□□□□ -0.51
MSH5-209ENST00000450148 CEACAM4O75871 244 aa11.89□□□□□ -0.51
MSH5-209ENST00000450148 HBQ1P09105 142 aa11.89□□□□□ -0.51
MSH5-209ENST00000450148 OGNP20774 298 aaKnown RBP11.89□□□□□ -0.51
MSH5-209ENST00000450148 COILP38432 576 aaPredicted RBP11.89□□□□□ -0.51
MSH5-209ENST00000450148 MAGEA3P43357 314 aa11.89□□□□□ -0.51
MSH5-209ENST00000450148 BDKRB1P46663 353 aa11.89□□□□□ -0.51
MSH5-209ENST00000450148 TERF1P54274 439 aa11.89□□□□□ -0.51
MSH5-209ENST00000450148 EIF3BP55884 814 aaKnown RBP11.89□□□□□ -0.51
MSH5-209ENST00000450148 FOXK1P85037 733 aa11.89□□□□□ -0.51
MSH5-209ENST00000450148 KLRB1Q12918 225 aa11.89□□□□□ -0.51
MSH5-209ENST00000450148 TMED2Q15363 201 aa11.89□□□□□ -0.51
MSH5-209ENST00000450148 PAPD7Q5XG87 772 aaKnown RBP11.89□□□□□ -0.51
MSH5-209ENST00000450148 FCRL6Q6DN72 434 aa11.89□□□□□ -0.51
MSH5-209ENST00000450148 HOOK3Q86VS8 718 aa11.89□□□□□ -0.51
MSH5-209ENST00000450148 SPNS2Q8IVW8 549 aa11.89□□□□□ -0.51
MSH5-209ENST00000450148 GPR135Q8IZ08 494 aa11.89□□□□□ -0.51
MSH5-209ENST00000450148 MCUQ8NE86 351 aa11.89□□□□□ -0.51
MSH5-209ENST00000450148 COG1Q8WTW3 980 aa11.89□□□□□ -0.51
MSH5-209ENST00000450148 MAGOHBQ96A72 148 aaKnown RBP11.89□□□□□ -0.51
MSH5-209ENST00000450148 ING2Q9H160 280 aa11.89□□□□□ -0.51
MSH5-209ENST00000450148 ENAMQ9NRM1 1142 aa11.89□□□□□ -0.51
MSH5-209ENST00000450148 SLC22A11Q9NSA0 550 aa11.89□□□□□ -0.51
MSH5-209ENST00000450148 IL1RAPL1Q9NZN1 696 aa11.89□□□□□ -0.51
MSH5-209ENST00000450148 DHCR7Q9UBM7 475 aaKnown RBP11.89□□□□□ -0.51
MSH5-209ENST00000450148 PLCL2Q9UPR0 1127 aa11.89□□□□□ -0.51
MSH5-209ENST00000450148 MED16Q9Y2X0 877 aa11.89□□□□□ -0.51
MSH5-209ENST00000450148 PCDHGA9Q9Y5G4 932 aaKnown RBP11.89□□□□□ -0.51
MSH5-209ENST00000450148 AP1M2Q9Y6Q5 423 aa11.89□□□□□ -0.51
MSH5-209ENST00000450148 SHANK1Q9Y566 2161 aa11.89□□□□□ -0.51
MSH5-209ENST00000450148 ZCWPW2A0A1B0GU75 182 aa11.88□□□□□ -0.51
MSH5-209ENST00000450148 FAM237BA0A1B0GVD1 139 aa11.88□□□□□ -0.51
MSH5-209ENST00000450148 A0A1W2PPV9 198 aa11.88□□□□□ -0.51
MSH5-209ENST00000450148 KPNA5O15131 536 aa11.88□□□□□ -0.51
MSH5-209ENST00000450148 ZSCAN9O15535 394 aaPredicted RBP11.88□□□□□ -0.51
MSH5-209ENST00000450148 MATN4O95460 622 aa11.88□□□□□ -0.51
MSH5-209ENST00000450148 S1PR4O95977 384 aa11.88□□□□□ -0.51
MSH5-209ENST00000450148 RPN2P04844 631 aa11.88□□□□□ -0.51
MSH5-209ENST00000450148 F7P08709 466 aaPredicted RBP11.88□□□□□ -0.51
MSH5-209ENST00000450148 MLNP12872 115 aa11.88□□□□□ -0.51
MSH5-209ENST00000450148 ITGAXP20702 1163 aa11.88□□□□□ -0.51
MSH5-209ENST00000450148 FMO4P31512 558 aa11.88□□□□□ -0.51
MSH5-209ENST00000450148 IGFBP7Q16270 282 aa11.88□□□□□ -0.51
MSH5-209ENST00000450148 ANKRD20A4Q4UJ75 823 aa11.88□□□□□ -0.51
MSH5-209ENST00000450148 C1orf189Q5VU69 101 aa11.88□□□□□ -0.51
MSH5-209ENST00000450148 MRNIPQ6NTE8 343 aa11.88□□□□□ -0.51
MSH5-209ENST00000450148 MRPL14Q6P1L8 145 aaKnown RBP11.88□□□□□ -0.51
MSH5-209ENST00000450148 TLDC1Q6P9B6 456 aa11.88□□□□□ -0.51
MSH5-209ENST00000450148 CCDC137Q6PK04 289 aaKnown RBP11.88□□□□□ -0.51
MSH5-209ENST00000450148 FIGLAQ6QHK4 219 aa11.88□□□□□ -0.51
MSH5-209ENST00000450148 ASB18Q6ZVZ8 466 aa11.88□□□□□ -0.51
MSH5-209ENST00000450148 OTOAQ7RTW8 1153 aa11.88□□□□□ -0.51
MSH5-209ENST00000450148 TAX1BP1Q86VP1 789 aa11.88□□□□□ -0.51
MSH5-209ENST00000450148 CILP2Q8IUL8 1156 aa11.88□□□□□ -0.51
MSH5-209ENST00000450148 SLC35F6Q8N357 371 aa11.88□□□□□ -0.51
MSH5-209ENST00000450148 ZNF655Q8N720 491 aaPredicted RBP11.88□□□□□ -0.51
MSH5-209ENST00000450148 HMGCLL1Q8TB92 370 aa11.88□□□□□ -0.51
MSH5-209ENST00000450148 PROKR1Q8TCW9 393 aa11.88□□□□□ -0.51
MSH5-209ENST00000450148 RAD51AP1Q96B01 352 aa11.88□□□□□ -0.51
MSH5-209ENST00000450148 ZNF285Q96NJ3 590 aa11.88□□□□□ -0.51
MSH5-209ENST00000450148 SERPINB12Q96P63 405 aa11.88□□□□□ -0.51
MSH5-209ENST00000450148 TCF12Q99081 682 aa11.88□□□□□ -0.51
MSH5-209ENST00000450148 DHRS4Q9BTZ2 278 aa11.88□□□□□ -0.51
MSH5-209ENST00000450148 EURLQ9NYK6 297 aa11.88□□□□□ -0.51
MSH5-209ENST00000450148 CRYL1Q9Y2S2 319 aa11.88□□□□□ -0.51
MSH5-209ENST00000450148 KLK4Q9Y5K2 254 aa11.88□□□□□ -0.51
MSH5-209ENST00000450148 ONECUT2O95948 504 aa11.87□□□□□ -0.51
MSH5-209ENST00000450148 ESR1P03372 595 aa11.87□□□□□ -0.51
MSH5-209ENST00000450148 ERGP11308 486 aa11.87□□□□□ -0.51
MSH5-209ENST00000450148 AGXTP21549 392 aa11.87□□□□□ -0.51
MSH5-209ENST00000450148 PSMB5P28074 263 aa11.87□□□□□ -0.51
MSH5-209ENST00000450148 ATP5DP30049 168 aa11.87□□□□□ -0.51
MSH5-209ENST00000450148 GRIA3P42263 894 aa11.87□□□□□ -0.51
MSH5-209ENST00000450148 CCL11P51671 97 aa11.87□□□□□ -0.51
MSH5-209ENST00000450148 FOXL2P58012 376 aa11.87□□□□□ -0.51
MSH5-209ENST00000450148 YBX1P67809 324 aaKnown RBP11.87□□□□□ -0.51
MSH5-209ENST00000450148 SARNPP82979 210 aaKnown RBP11.87□□□□□ -0.51
MSH5-209ENST00000450148 ACSBG2Q5FVE4 666 aa11.87□□□□□ -0.51
MSH5-209ENST00000450148 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.87□□□□□ -0.51
MSH5-209ENST00000450148 RNF187Q5TA31 235 aaPredicted RBP11.87□□□□□ -0.51
MSH5-209ENST00000450148 NEPROQ6NW34 567 aa11.87□□□□□ -0.51
MSH5-209ENST00000450148 SDCCAG8Q86SQ7 713 aaPredicted RBP11.87□□□□□ -0.51
MSH5-209ENST00000450148 MCATQ8IVS2 390 aaKnown RBP11.87□□□□□ -0.51
MSH5-209ENST00000450148 NAT8LQ8N9F0 302 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms