RNA–Protein interactions for RNA: ENST00000444951.5

LIME1-202, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3

Gene LIME1, Length 451 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-202ENST00000444951 MGAQ8IWI9 3026 aa16.71■□□□□ 0.27
LIME1-202ENST00000444951 NCF1BA6NI72 391 aaPredicted RBP16.71■□□□□ 0.27
LIME1-202ENST00000444951 NCF1CA8MVU1 366 aaPredicted RBP16.71■□□□□ 0.27
LIME1-202ENST00000444951 GFYI3L273 518 aa16.71■□□□□ 0.27
LIME1-202ENST00000444951 BRINP1O60477 761 aa16.71■□□□□ 0.27
LIME1-202ENST00000444951 MT-CO3P00414 261 aa16.71■□□□□ 0.27
LIME1-202ENST00000444951 COL6A2P12110 1019 aa16.71■□□□□ 0.27
LIME1-202ENST00000444951 NCF1P14598 390 aaPredicted RBP16.71■□□□□ 0.27
LIME1-202ENST00000444951 NDUFS1P28331 727 aa16.71■□□□□ 0.27
LIME1-202ENST00000444951 CCNFP41002 786 aa16.71■□□□□ 0.27
LIME1-202ENST00000444951 SP140Q13342 867 aa16.71■□□□□ 0.27
LIME1-202ENST00000444951 TSNAXIP1Q2TAA8 658 aa16.71■□□□□ 0.27
LIME1-202ENST00000444951 GUSBP11Q6P575 273 aa16.71■□□□□ 0.27
LIME1-202ENST00000444951 MBOAT1Q6ZNC8 495 aa16.71■□□□□ 0.27
LIME1-202ENST00000444951 SH2D5Q6ZV89 423 aa16.71■□□□□ 0.27
LIME1-202ENST00000444951 EXOC3L1Q86VI1 746 aa16.71■□□□□ 0.27
LIME1-202ENST00000444951 GPSM1Q86YR5 675 aa16.71■□□□□ 0.27
LIME1-202ENST00000444951 OR52E1Q8NGJ3 308 aa16.71■□□□□ 0.27
LIME1-202ENST00000444951 MCOLN3Q8TDD5 553 aa16.71■□□□□ 0.27
LIME1-202ENST00000444951 GPR78Q96P69 363 aa16.71■□□□□ 0.27
LIME1-202ENST00000444951 IL17FQ96PD4 163 aa16.71■□□□□ 0.27
LIME1-202ENST00000444951 SLC38A3Q99624 504 aa16.71■□□□□ 0.27
LIME1-202ENST00000444951 TBC1D10AQ9BXI6 508 aa16.71■□□□□ 0.27
LIME1-202ENST00000444951 TRIM54Q9BYV2 358 aa16.71■□□□□ 0.27
LIME1-202ENST00000444951 IQCGQ9H095 443 aaKnown RBP16.71■□□□□ 0.27
LIME1-202ENST00000444951 PARVBQ9HBI1 364 aa16.71■□□□□ 0.27
LIME1-202ENST00000444951 TMEM216Q9P0N5 145 aa16.71■□□□□ 0.27
LIME1-202ENST00000444951 POLG2Q9UHN1 485 aa16.71■□□□□ 0.27
LIME1-202ENST00000444951 PDE10AQ9Y233 779 aa16.71■□□□□ 0.27
LIME1-202ENST00000444951 SUPT3HB4E1H0 165 aa16.7■□□□□ 0.26
LIME1-202ENST00000444951 SLC16A5O15375 505 aa16.7■□□□□ 0.26
LIME1-202ENST00000444951 GLRA3O75311 464 aa16.7■□□□□ 0.26
LIME1-202ENST00000444951 SUPT3HO75486 399 aa16.7■□□□□ 0.26
LIME1-202ENST00000444951 HIST1H2AGP0C0S8 130 aaPredicted RBP16.7■□□□□ 0.26
LIME1-202ENST00000444951 CKMT1AP12532 417 aa16.7■□□□□ 0.26
LIME1-202ENST00000444951 HIST1H2ADP20671 130 aa16.7■□□□□ 0.26
LIME1-202ENST00000444951 ALDH4A1P30038 563 aa16.7■□□□□ 0.26
LIME1-202ENST00000444951 KCNC1P48547 511 aa16.7■□□□□ 0.26
LIME1-202ENST00000444951 CCT5P48643 541 aa16.7■□□□□ 0.26
LIME1-202ENST00000444951 MAGOHP61326 146 aaKnown RBP16.7■□□□□ 0.26
LIME1-202ENST00000444951 SLC18A2Q05940 514 aa16.7■□□□□ 0.26
LIME1-202ENST00000444951 TSTA3Q13630 321 aaPredicted RBP16.7■□□□□ 0.26
LIME1-202ENST00000444951 ACAP2Q15057 778 aa16.7■□□□□ 0.26
LIME1-202ENST00000444951 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.7■□□□□ 0.26
LIME1-202ENST00000444951 SBSNQ6UWP8 590 aa16.7■□□□□ 0.26
LIME1-202ENST00000444951 CDHR3Q6ZTQ4 885 aa16.7■□□□□ 0.26
LIME1-202ENST00000444951 TMEM26Q6ZUK4 368 aa16.7■□□□□ 0.26
LIME1-202ENST00000444951 EFL1Q7Z2Z2 1120 aaKnown RBP16.7■□□□□ 0.26
LIME1-202ENST00000444951 ADAMTSL2Q86TH1 951 aa16.7■□□□□ 0.26
LIME1-202ENST00000444951 ISCA2Q86U28 154 aa16.7■□□□□ 0.26
LIME1-202ENST00000444951 C17orf82Q86X59 251 aaPredicted RBP16.7■□□□□ 0.26
LIME1-202ENST00000444951 C2orf73Q8N5S3 287 aaPredicted RBP16.7■□□□□ 0.26
LIME1-202ENST00000444951 FAM181AQ8N9Y4 354 aa16.7■□□□□ 0.26
LIME1-202ENST00000444951 AVL9Q8NBF6 648 aa16.7■□□□□ 0.26
LIME1-202ENST00000444951 OR4E2Q8NGC2 313 aa16.7■□□□□ 0.26
LIME1-202ENST00000444951 MAGEC3Q8TD91 643 aa16.7■□□□□ 0.26
LIME1-202ENST00000444951 LCN9Q8WX39 176 aa16.7■□□□□ 0.26
LIME1-202ENST00000444951 KIAA1191Q96A73 305 aa16.7■□□□□ 0.26
LIME1-202ENST00000444951 CCDC74AQ96AQ1 378 aa16.7■□□□□ 0.26
LIME1-202ENST00000444951 RAD51AP1Q96B01 352 aa16.7■□□□□ 0.26
LIME1-202ENST00000444951 APOPT1Q96IL0 206 aa16.7■□□□□ 0.26
LIME1-202ENST00000444951 HIST1H2AHQ96KK5 128 aa16.7■□□□□ 0.26
LIME1-202ENST00000444951 PKP4Q99569 1192 aa16.7■□□□□ 0.26
LIME1-202ENST00000444951 HIST1H2AJQ99878 128 aa16.7■□□□□ 0.26
LIME1-202ENST00000444951 EGFL8Q99944 293 aa16.7■□□□□ 0.26
LIME1-202ENST00000444951 H2AFJQ9BTM1 129 aa16.7■□□□□ 0.26
LIME1-202ENST00000444951 SLC12A9Q9BXP2 914 aa16.7■□□□□ 0.26
LIME1-202ENST00000444951 TFB2MQ9H5Q4 396 aaKnown RBP16.7■□□□□ 0.26
LIME1-202ENST00000444951 KIR3DX1Q9H7L2 352 aa16.7■□□□□ 0.26
LIME1-202ENST00000444951 KCNK9Q9NPC2 374 aa16.7■□□□□ 0.26
LIME1-202ENST00000444951 ABCF3Q9NUQ8 709 aa16.7■□□□□ 0.26
LIME1-202ENST00000444951 ARL15Q9NXU5 204 aa16.7■□□□□ 0.26
LIME1-202ENST00000444951 CD274Q9NZQ7 290 aa16.7■□□□□ 0.26
LIME1-202ENST00000444951 SENP1Q9P0U3 644 aa16.7■□□□□ 0.26
LIME1-202ENST00000444951 CPSF2Q9P2I0 782 aaKnown RBP16.7■□□□□ 0.26
LIME1-202ENST00000444951 DCDC2Q9UHG0 476 aa16.7■□□□□ 0.26
LIME1-202ENST00000444951 KALRNO60229 2985 aa16.69■□□□□ 0.26
LIME1-202ENST00000444951 UBXN8O00124 270 aa16.69■□□□□ 0.26
LIME1-202ENST00000444951 S100BP04271 92 aaPredicted RBP16.69■□□□□ 0.26
LIME1-202ENST00000444951 GSTA1P08263 222 aa16.69■□□□□ 0.26
LIME1-202ENST00000444951 TPBGLP0DKB5 382 aa16.69■□□□□ 0.26
LIME1-202ENST00000444951 GLB1P16278 677 aa16.69■□□□□ 0.26
LIME1-202ENST00000444951 FASLGP48023 281 aa16.69■□□□□ 0.26
LIME1-202ENST00000444951 KPNA2P52292 529 aaKnown RBP16.69■□□□□ 0.26
LIME1-202ENST00000444951 TECRLQ5HYJ1 363 aa16.69■□□□□ 0.26
LIME1-202ENST00000444951 PERM1Q5SV97 790 aa16.69■□□□□ 0.26
LIME1-202ENST00000444951 AGBL2Q5U5Z8 902 aa16.69■□□□□ 0.26
LIME1-202ENST00000444951 CDCP2Q5VXM1 449 aa16.69■□□□□ 0.26
LIME1-202ENST00000444951 TAX1BP1Q86VP1 789 aa16.69■□□□□ 0.26
LIME1-202ENST00000444951 CACTIN-AS1Q8N1I8 211 aa16.69■□□□□ 0.26
LIME1-202ENST00000444951 BANPQ8N9N5 519 aa16.69■□□□□ 0.26
LIME1-202ENST00000444951 CCDC63Q8NA47 563 aa16.69■□□□□ 0.26
LIME1-202ENST00000444951 OR9A1PQ8NGU1 263 aa16.69■□□□□ 0.26
LIME1-202ENST00000444951 OR10G6Q8NH81 332 aa16.69■□□□□ 0.26
LIME1-202ENST00000444951 SNIP1Q8TAD8 396 aaKnown RBP16.69■□□□□ 0.26
LIME1-202ENST00000444951 STAG3L4Q8TBR4 150 aa16.69■□□□□ 0.26
LIME1-202ENST00000444951 SH3KBP1Q96B97 665 aa16.69■□□□□ 0.26
LIME1-202ENST00000444951 ZMYND15Q9H091 742 aa16.69■□□□□ 0.26
LIME1-202ENST00000444951 PRORYQ9H606 182 aa16.69■□□□□ 0.26
LIME1-202ENST00000444951 SYNDIG1Q9H7V2 258 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms