RNA–Protein interactions for RNA: ENST00000442201.6

CCDC39-201, Transcript of coiled-coil domain containing 39, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC39, Length 3,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-201ENST00000442201 AFAP1L2Q8N4X5 818 aa7.89□□□□□ -1.15
CCDC39-201ENST00000442201 PDPRQ8NCN5 879 aa7.89□□□□□ -1.15
CCDC39-201ENST00000442201 OR2T34Q8NGX1 318 aa7.89□□□□□ -1.15
CCDC39-201ENST00000442201 LILRB1Q8NHL6 650 aaPredicted RBP7.89□□□□□ -1.15
CCDC39-201ENST00000442201 ASB11Q8WXH4 323 aa7.89□□□□□ -1.15
CCDC39-201ENST00000442201 RILPQ96NA2 401 aa7.89□□□□□ -1.15
CCDC39-201ENST00000442201 C1QTNF3Q9BXJ4 246 aa7.89□□□□□ -1.15
CCDC39-201ENST00000442201 COG4Q9H9E3 785 aa7.89□□□□□ -1.15
CCDC39-201ENST00000442201 LTB4R2Q9NPC1 389 aa7.89□□□□□ -1.15
CCDC39-201ENST00000442201 ITM2CQ9NQX7 267 aa7.89□□□□□ -1.15
CCDC39-201ENST00000442201 VTI1BQ9UEU0 232 aa7.89□□□□□ -1.15
CCDC39-201ENST00000442201 ZDHHC2Q9UIJ5 367 aa7.89□□□□□ -1.15
CCDC39-201ENST00000442201 MYO10Q9HD67 2058 aa7.89□□□□□ -1.15
CCDC39-201ENST00000442201 SLC5A10A0PJK1 596 aa7.89□□□□□ -1.15
CCDC39-201ENST00000442201 LRRC14BA6NHZ5 514 aa7.89□□□□□ -1.15
CCDC39-201ENST00000442201 FAM170BA6NMN3 283 aa7.89□□□□□ -1.15
CCDC39-201ENST00000442201 IDH3BO43837 385 aa7.89□□□□□ -1.15
CCDC39-201ENST00000442201 ENTPD5O75356 428 aa7.89□□□□□ -1.15
CCDC39-201ENST00000442201 POP7O75817 140 aaKnown RBP7.89□□□□□ -1.15
CCDC39-201ENST00000442201 RPS17P08708 135 aaKnown RBP7.89□□□□□ -1.15
CCDC39-201ENST00000442201 ENO2P09104 434 aaPredicted RBP7.89□□□□□ -1.15
CCDC39-201ENST00000442201 HIST1H2AGP0C0S8 130 aaPredicted RBP7.89□□□□□ -1.15
CCDC39-201ENST00000442201 HIST1H2ADP20671 130 aa7.89□□□□□ -1.15
CCDC39-201ENST00000442201 CCR3P51677 355 aa7.89□□□□□ -1.15
CCDC39-201ENST00000442201 STARD6P59095 220 aa7.89□□□□□ -1.15
CCDC39-201ENST00000442201 PPP2CBP62714 309 aa7.89□□□□□ -1.15
CCDC39-201ENST00000442201 PPP2CAP67775 309 aa7.89□□□□□ -1.15
CCDC39-201ENST00000442201 SP140Q13342 867 aa7.89□□□□□ -1.15
CCDC39-201ENST00000442201 CRTC3Q6UUV7 619 aa7.89□□□□□ -1.15
CCDC39-201ENST00000442201 CUZD1Q86UP6 607 aa7.89□□□□□ -1.15
CCDC39-201ENST00000442201 DLG3Q92796 817 aa7.89□□□□□ -1.15
CCDC39-201ENST00000442201 EME1Q96AY2 570 aa7.89□□□□□ -1.15
CCDC39-201ENST00000442201 HIST1H2AHQ96KK5 128 aa7.89□□□□□ -1.15
CCDC39-201ENST00000442201 LINC00615Q96LM1 132 aaPredicted RBP7.89□□□□□ -1.15
CCDC39-201ENST00000442201 HIST1H2AJQ99878 128 aa7.89□□□□□ -1.15
CCDC39-201ENST00000442201 H2AFJQ9BTM1 129 aa7.89□□□□□ -1.15
CCDC39-201ENST00000442201 TBC1D10AQ9BXI6 508 aa7.89□□□□□ -1.15
CCDC39-201ENST00000442201 SLC12A9Q9BXP2 914 aa7.89□□□□□ -1.15
CCDC39-201ENST00000442201 C12orf10Q9HB07 376 aa7.89□□□□□ -1.15
CCDC39-201ENST00000442201 SGK2Q9HBY8 427 aa7.89□□□□□ -1.15
CCDC39-201ENST00000442201 IL20Q9NYY1 176 aa7.89□□□□□ -1.15
CCDC39-201ENST00000442201 HEY2Q9UBP5 337 aa7.89□□□□□ -1.15
CCDC39-201ENST00000442201 KLHL3Q9UH77 587 aa7.89□□□□□ -1.15
CCDC39-201ENST00000442201 OR1A2Q9Y585 309 aa7.89□□□□□ -1.15
CCDC39-201ENST00000442201 ATG2BQ96BY7 2078 aa7.88□□□□□ -1.15
CCDC39-201ENST00000442201 C17orf113A0A1B0GUU1 675 aa7.88□□□□□ -1.15
CCDC39-201ENST00000442201 GPR89AB7ZAQ6 455 aa7.88□□□□□ -1.15
CCDC39-201ENST00000442201 SLC16A5O15375 505 aa7.88□□□□□ -1.15
CCDC39-201ENST00000442201 LILRB5O75023 590 aa7.88□□□□□ -1.15
CCDC39-201ENST00000442201 ANXA5P08758 320 aa7.88□□□□□ -1.15
CCDC39-201ENST00000442201 GPR89BP0CG08 455 aa7.88□□□□□ -1.15
CCDC39-201ENST00000442201 TSPAN8P19075 237 aa7.88□□□□□ -1.15
CCDC39-201ENST00000442201 CYP2A7P20853 494 aa7.88□□□□□ -1.15
CCDC39-201ENST00000442201 MAPK9P45984 424 aa7.88□□□□□ -1.15
CCDC39-201ENST00000442201 RPIAP49247 311 aa7.88□□□□□ -1.15
CCDC39-201ENST00000442201 AGTR2P50052 363 aa7.88□□□□□ -1.15
CCDC39-201ENST00000442201 CLCQ05315 142 aa7.88□□□□□ -1.15
CCDC39-201ENST00000442201 LCP2Q13094 533 aa7.88□□□□□ -1.15
CCDC39-201ENST00000442201 FBXO48Q5FWF7 155 aa7.88□□□□□ -1.15
CCDC39-201ENST00000442201 CDKL4Q5MAI5 379 aa7.88□□□□□ -1.15
CCDC39-201ENST00000442201 SULT1C3Q6IMI6 304 aa7.88□□□□□ -1.15
CCDC39-201ENST00000442201 SATL1Q86VE3 508 aa7.88□□□□□ -1.15
CCDC39-201ENST00000442201 ZNF547Q8IVP9 402 aa7.88□□□□□ -1.15
CCDC39-201ENST00000442201 CFAP206Q8IYR0 622 aa7.88□□□□□ -1.15
CCDC39-201ENST00000442201 SIX5Q8N196 739 aa7.88□□□□□ -1.15
CCDC39-201ENST00000442201 TSTD1Q8NFU3 115 aa7.88□□□□□ -1.15
CCDC39-201ENST00000442201 HM13Q8TCT9 377 aa7.88□□□□□ -1.15
CCDC39-201ENST00000442201 MCOLN3Q8TDD5 553 aa7.88□□□□□ -1.15
CCDC39-201ENST00000442201 FAR2Q96K12 515 aa7.88□□□□□ -1.15
CCDC39-201ENST00000442201 LGR4Q9BXB1 951 aa7.88□□□□□ -1.15
CCDC39-201ENST00000442201 PLGRKTQ9HBL7 147 aa7.88□□□□□ -1.15
CCDC39-201ENST00000442201 CD93Q9NPY3 652 aa7.88□□□□□ -1.15
CCDC39-201ENST00000442201 DNAJC28Q9NX36 388 aa7.88□□□□□ -1.15
CCDC39-201ENST00000442201 ARL15Q9NXU5 204 aa7.88□□□□□ -1.15
CCDC39-201ENST00000442201 SATB2Q9UPW6 733 aa7.88□□□□□ -1.15
CCDC39-201ENST00000442201 APOBEC2Q9Y235 224 aaKnown RBP7.88□□□□□ -1.15
CCDC39-201ENST00000442201 NOSIPQ9Y314 301 aaKnown RBP7.88□□□□□ -1.15
CCDC39-201ENST00000442201 MGAT4DA6NG13 374 aa7.88□□□□□ -1.15
CCDC39-201ENST00000442201 H3BM21 787 aa7.88□□□□□ -1.15
CCDC39-201ENST00000442201 GFYI3L273 518 aa7.88□□□□□ -1.15
CCDC39-201ENST00000442201 CDK2AP1O14519 115 aa7.88□□□□□ -1.15
CCDC39-201ENST00000442201 IGFALSP35858 605 aa7.88□□□□□ -1.15
CCDC39-201ENST00000442201 PREPP48147 710 aa7.88□□□□□ -1.15
CCDC39-201ENST00000442201 ARHGAP8P85298 464 aa7.88□□□□□ -1.15
CCDC39-201ENST00000442201 LRRTM4Q86VH4 590 aa7.88□□□□□ -1.15
CCDC39-201ENST00000442201 TRIM69Q86WT6 500 aa7.88□□□□□ -1.15
CCDC39-201ENST00000442201 LILRA3Q8N6C8 439 aaPredicted RBP7.88□□□□□ -1.15
CCDC39-201ENST00000442201 DENND6BQ8NEG7 585 aa7.88□□□□□ -1.15
CCDC39-201ENST00000442201 FOXJ1Q92949 421 aa7.88□□□□□ -1.15
CCDC39-201ENST00000442201 ESAMQ96AP7 390 aa7.88□□□□□ -1.15
CCDC39-201ENST00000442201 FOPNLQ96NB1 174 aa7.88□□□□□ -1.15
CCDC39-201ENST00000442201 NSUN5Q96P11 429 aaKnown RBP7.88□□□□□ -1.15
CCDC39-201ENST00000442201 MYOCQ99972 504 aa7.88□□□□□ -1.15
CCDC39-201ENST00000442201 EBF4Q9BQW3 602 aa7.88□□□□□ -1.15
CCDC39-201ENST00000442201 FOXQ1Q9C009 403 aa7.88□□□□□ -1.15
CCDC39-201ENST00000442201 WWOXQ9NZC7 414 aa7.88□□□□□ -1.15
CCDC39-201ENST00000442201 SELENONQ9NZV5 590 aa7.88□□□□□ -1.15
CCDC39-201ENST00000442201 USP36Q9P275 1121 aaKnown RBP7.88□□□□□ -1.15
CCDC39-201ENST00000442201 THEGQ9P2T0 379 aa7.88□□□□□ -1.15
CCDC39-201ENST00000442201 EBF1Q9UH73 591 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms