RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 FAM47DPA6NHR8 397 aa3.44□□□□□ -1.86
HMGB3P11-201ENST00000440127 FOXO6A8MYZ6 492 aa3.44□□□□□ -1.86
HMGB3P11-201ENST00000440127 KPNA7A9QM74 516 aa3.44□□□□□ -1.86
HMGB3P11-201ENST00000440127 ZNF487B1APH4 448 aa3.44□□□□□ -1.86
HMGB3P11-201ENST00000440127 B4DGG1 531 aa3.44□□□□□ -1.86
HMGB3P11-201ENST00000440127 E7ESA3 106 aa3.44□□□□□ -1.86
HMGB3P11-201ENST00000440127 H0YHG0 523 aa3.44□□□□□ -1.86
HMGB3P11-201ENST00000440127 GOLGA8MH3BSY2 632 aa3.44□□□□□ -1.86
HMGB3P11-201ENST00000440127 STX16-NPEPL1H3BU86 382 aa3.44□□□□□ -1.86
HMGB3P11-201ENST00000440127 HAS3O00219 553 aa3.44□□□□□ -1.86
HMGB3P11-201ENST00000440127 STX16O14662 325 aa3.44□□□□□ -1.86
HMGB3P11-201ENST00000440127 MDM4O15151 490 aa3.44□□□□□ -1.86
HMGB3P11-201ENST00000440127 CHADO15335 359 aa3.44□□□□□ -1.86
HMGB3P11-201ENST00000440127 PAPSS1O43252 624 aaPredicted RBP3.44□□□□□ -1.86
HMGB3P11-201ENST00000440127 AHCYL1O43865 530 aa3.44□□□□□ -1.86
HMGB3P11-201ENST00000440127 HUS1O60921 280 aa3.44□□□□□ -1.86
HMGB3P11-201ENST00000440127 GRAP2O75791 330 aa3.44□□□□□ -1.86
HMGB3P11-201ENST00000440127 TOMM70O94826 608 aa3.44□□□□□ -1.86
HMGB3P11-201ENST00000440127 CELF2O95319 508 aaKnown RBP3.44□□□□□ -1.86
HMGB3P11-201ENST00000440127 CRYABP02511 175 aaKnown RBP3.44□□□□□ -1.86
HMGB3P11-201ENST00000440127 T-ENOLP0DO92 83 aa3.44□□□□□ -1.86
HMGB3P11-201ENST00000440127 KCNE1P15382 129 aa3.44□□□□□ -1.86
HMGB3P11-201ENST00000440127 WARSP23381 471 aaKnown RBP3.44□□□□□ -1.86
HMGB3P11-201ENST00000440127 IL4RP24394 825 aa3.44□□□□□ -1.86
HMGB3P11-201ENST00000440127 ABCD3P28288 659 aa3.44□□□□□ -1.86
HMGB3P11-201ENST00000440127 DUSP1P28562 367 aa3.44□□□□□ -1.86
HMGB3P11-201ENST00000440127 GCAP28676 217 aa3.44□□□□□ -1.86
HMGB3P11-201ENST00000440127 ADORA2BP29275 332 aa3.44□□□□□ -1.86
HMGB3P11-201ENST00000440127 NTSR1P30989 418 aa3.44□□□□□ -1.86
HMGB3P11-201ENST00000440127 RGS2P41220 211 aa3.44□□□□□ -1.86
HMGB3P11-201ENST00000440127 MSH2P43246 934 aa3.44□□□□□ -1.86
HMGB3P11-201ENST00000440127 PTPN9P43378 593 aa3.44□□□□□ -1.86
HMGB3P11-201ENST00000440127 NR2C2P49116 596 aa3.44□□□□□ -1.86
HMGB3P11-201ENST00000440127 RPL34P49207 117 aaKnown RBP3.44□□□□□ -1.86
HMGB3P11-201ENST00000440127 ALDH7A1P49419 539 aaKnown RBP3.44□□□□□ -1.86
HMGB3P11-201ENST00000440127 CTCFP49711 727 aaPredicted RBP3.44□□□□□ -1.86
HMGB3P11-201ENST00000440127 TAF6P49848 677 aa3.44□□□□□ -1.86
HMGB3P11-201ENST00000440127 CRYBB1P53674 252 aaPredicted RBP3.44□□□□□ -1.86
HMGB3P11-201ENST00000440127 SLC8A3P57103 927 aa3.44□□□□□ -1.86
HMGB3P11-201ENST00000440127 GPX6P59796 221 aa3.44□□□□□ -1.86
HMGB3P11-201ENST00000440127 BASP1P80723 227 aaKnown RBP3.44□□□□□ -1.86
HMGB3P11-201ENST00000440127 B4GALNT1Q00973 533 aa3.44□□□□□ -1.86
HMGB3P11-201ENST00000440127 SLC20A2Q08357 652 aa3.44□□□□□ -1.86
HMGB3P11-201ENST00000440127 GALNT2Q10471 571 aa3.44□□□□□ -1.86
HMGB3P11-201ENST00000440127 BST2Q10589 180 aaKnown RBP3.44□□□□□ -1.86
HMGB3P11-201ENST00000440127 SLC14A1Q13336 389 aa3.44□□□□□ -1.86
HMGB3P11-201ENST00000440127 XRCC4Q13426 336 aa3.44□□□□□ -1.86
HMGB3P11-201ENST00000440127 CBFBQ13951 182 aa3.44□□□□□ -1.86
HMGB3P11-201ENST00000440127 KPNB1Q14974 876 aaKnown RBP3.44□□□□□ -1.86
HMGB3P11-201ENST00000440127 FASTKD3Q14CZ7 662 aaKnown RBP3.44□□□□□ -1.86
HMGB3P11-201ENST00000440127 PKN2Q16513 984 aaKnown RBP3.44□□□□□ -1.86
HMGB3P11-201ENST00000440127 CDO1Q16878 200 aa3.44□□□□□ -1.86
HMGB3P11-201ENST00000440127 SOWAHAQ2M3V2 549 aa3.44□□□□□ -1.86
HMGB3P11-201ENST00000440127 C15orf59Q2T9L4 293 aaPredicted RBP3.44□□□□□ -1.86
HMGB3P11-201ENST00000440127 MIDNQ504T8 468 aa3.44□□□□□ -1.86
HMGB3P11-201ENST00000440127 RAB6CQ53S08 254 aa3.44□□□□□ -1.86
HMGB3P11-201ENST00000440127 EFHC1Q5JVL4 640 aa3.44□□□□□ -1.86
HMGB3P11-201ENST00000440127 FNBP1LQ5T0N5 605 aa3.44□□□□□ -1.86
HMGB3P11-201ENST00000440127 ANKRD22Q5VYY1 191 aa3.44□□□□□ -1.86
HMGB3P11-201ENST00000440127 NUGGCQ68CJ6 796 aa3.44□□□□□ -1.86
HMGB3P11-201ENST00000440127 DGAT2L7PQ6IED9 249 aa3.44□□□□□ -1.86
HMGB3P11-201ENST00000440127 MSANTD2Q6P1R3 559 aa3.44□□□□□ -1.86
HMGB3P11-201ENST00000440127 COLCA1Q6ZS62 124 aa3.44□□□□□ -1.86
HMGB3P11-201ENST00000440127 C3orf62Q6ZUJ4 267 aa3.44□□□□□ -1.86
HMGB3P11-201ENST00000440127 FAM57BQ71RH2 274 aa3.44□□□□□ -1.86
HMGB3P11-201ENST00000440127 SYT13Q7L8C5 426 aa3.44□□□□□ -1.86
HMGB3P11-201ENST00000440127 ARCQ7LC44 396 aa3.44□□□□□ -1.86
HMGB3P11-201ENST00000440127 TLK2Q86UE8 772 aa3.44□□□□□ -1.86
HMGB3P11-201ENST00000440127 TRABD2AQ86V40 505 aa3.44□□□□□ -1.86
HMGB3P11-201ENST00000440127 TTC30AQ86WT1 665 aa3.44□□□□□ -1.86
HMGB3P11-201ENST00000440127 CDKL3Q8IVW4 592 aaPredicted RBP3.44□□□□□ -1.86
HMGB3P11-201ENST00000440127 PDIK1LQ8N165 341 aa3.44□□□□□ -1.86
HMGB3P11-201ENST00000440127 PQLC3Q8N755 202 aa3.44□□□□□ -1.86
HMGB3P11-201ENST00000440127 LSMEM1Q8N8F7 131 aa3.44□□□□□ -1.86
HMGB3P11-201ENST00000440127 C11orf44Q8N8P7 122 aa3.44□□□□□ -1.86
HMGB3P11-201ENST00000440127 C12orf29Q8N999 325 aa3.44□□□□□ -1.86
HMGB3P11-201ENST00000440127 FBXO36Q8NEA4 188 aa3.44□□□□□ -1.86
HMGB3P11-201ENST00000440127 APPL2Q8NEU8 664 aa3.44□□□□□ -1.86
HMGB3P11-201ENST00000440127 CREB3L4Q8TEY5 395 aa3.44□□□□□ -1.86
HMGB3P11-201ENST00000440127 FAM172AQ8WUF8 416 aa3.44□□□□□ -1.86
HMGB3P11-201ENST00000440127 WDR60Q8WVS4 1066 aa3.44□□□□□ -1.86
HMGB3P11-201ENST00000440127 DNAJB3Q8WWF6 145 aa3.44□□□□□ -1.86
HMGB3P11-201ENST00000440127 CPT1BQ92523 772 aa3.44□□□□□ -1.86
HMGB3P11-201ENST00000440127 C18orf25Q96B23 403 aaPredicted RBP3.44□□□□□ -1.86
HMGB3P11-201ENST00000440127 FAF2Q96CS3 445 aa3.44□□□□□ -1.86
HMGB3P11-201ENST00000440127 KTI12Q96EK9 354 aaPredicted RBP3.44□□□□□ -1.86
HMGB3P11-201ENST00000440127 RNF125Q96EQ8 232 aa3.44□□□□□ -1.86
HMGB3P11-201ENST00000440127 THOC3Q96J01 351 aaKnown RBP3.44□□□□□ -1.86
HMGB3P11-201ENST00000440127 MARK4Q96L34 752 aa3.44□□□□□ -1.86
HMGB3P11-201ENST00000440127 HSFY1Q96LI6 401 aa3.44□□□□□ -1.86
HMGB3P11-201ENST00000440127 SMC6Q96SB8 1091 aa3.44□□□□□ -1.86
HMGB3P11-201ENST00000440127 PAIP2Q9BPZ3 127 aaKnown RBP3.44□□□□□ -1.86
HMGB3P11-201ENST00000440127 ZNF670Q9BS34 389 aa3.44□□□□□ -1.86
HMGB3P11-201ENST00000440127 HTATIP2Q9BUP3 242 aa3.44□□□□□ -1.86
HMGB3P11-201ENST00000440127 SNRNP25Q9BV90 132 aaKnown RBP3.44□□□□□ -1.86
HMGB3P11-201ENST00000440127 APOL6Q9BWW8 343 aa3.44□□□□□ -1.86
HMGB3P11-201ENST00000440127 FRMD8Q9BZ67 464 aaPredicted RBP3.44□□□□□ -1.86
HMGB3P11-201ENST00000440127 TRIM2Q9C040 744 aa3.44□□□□□ -1.86
HMGB3P11-201ENST00000440127 RAB6CQ9H0N0 254 aa3.44□□□□□ -1.86
HMGB3P11-201ENST00000440127 FAM234AQ9H0X4 552 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms