RNA–Protein interactions for RNA: ENST00000439453.5

HPS4-206, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 3,936 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-206ENST00000439453 TIGD5Q53EQ6 642 aa8.38□□□□□ -1.07
HPS4-206ENST00000439453 ANKS6Q68DC2 871 aa8.38□□□□□ -1.07
HPS4-206ENST00000439453 ZNF549Q6P9A3 640 aa8.38□□□□□ -1.07
HPS4-206ENST00000439453 TTC23LQ6PF05 361 aa8.38□□□□□ -1.07
HPS4-206ENST00000439453 CCBE1Q6UXH8 406 aaPredicted RBP8.38□□□□□ -1.07
HPS4-206ENST00000439453 ADHFE1Q8IWW8 467 aa8.38□□□□□ -1.07
HPS4-206ENST00000439453 RHEBL1Q8TAI7 183 aa8.38□□□□□ -1.07
HPS4-206ENST00000439453 MSLNLQ96KJ4 702 aa8.38□□□□□ -1.07
HPS4-206ENST00000439453 CCDC115Q96NT0 180 aa8.38□□□□□ -1.07
HPS4-206ENST00000439453 CDK5RAP1Q96SZ6 601 aaKnown RBP8.38□□□□□ -1.07
HPS4-206ENST00000439453 SCN3BQ9NY72 215 aa8.38□□□□□ -1.07
HPS4-206ENST00000439453 UBQLN1Q9UMX0 589 aaKnown RBP8.38□□□□□ -1.07
HPS4-206ENST00000439453 PCDHB14Q9Y5E9 798 aa8.38□□□□□ -1.07
HPS4-206ENST00000439453 METTL15A6NJ78 407 aa8.38□□□□□ -1.07
HPS4-206ENST00000439453 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.38□□□□□ -1.07
HPS4-206ENST00000439453 PER2O15055 1255 aa8.38□□□□□ -1.07
HPS4-206ENST00000439453 SCO2O43819 266 aa8.38□□□□□ -1.07
HPS4-206ENST00000439453 MITFO75030 526 aaPredicted RBP8.38□□□□□ -1.07
HPS4-206ENST00000439453 ITGAMP11215 1152 aa8.38□□□□□ -1.07
HPS4-206ENST00000439453 CD36P16671 472 aa8.38□□□□□ -1.07
HPS4-206ENST00000439453 PLIN5Q00G26 463 aa8.38□□□□□ -1.07
HPS4-206ENST00000439453 TRAF3Q13114 568 aa8.38□□□□□ -1.07
HPS4-206ENST00000439453 ADAM15Q13444 863 aa8.38□□□□□ -1.07
HPS4-206ENST00000439453 ZC3H12BQ5HYM0 836 aaKnown RBP8.38□□□□□ -1.07
HPS4-206ENST00000439453 LAIR1Q6GTX8 287 aa8.38□□□□□ -1.07
HPS4-206ENST00000439453 KDELC1Q6UW63 502 aa8.38□□□□□ -1.07
HPS4-206ENST00000439453 TMC5Q6UXY8 1006 aa8.38□□□□□ -1.07
HPS4-206ENST00000439453 GPRIN1Q7Z2K8 1008 aa8.38□□□□□ -1.07
HPS4-206ENST00000439453 EFL1Q7Z2Z2 1120 aaKnown RBP8.38□□□□□ -1.07
HPS4-206ENST00000439453 SYVN1Q86TM6 617 aa8.38□□□□□ -1.07
HPS4-206ENST00000439453 FBXO39Q8N4B4 442 aa8.38□□□□□ -1.07
HPS4-206ENST00000439453 FNDC5Q8NAU1 212 aa8.38□□□□□ -1.07
HPS4-206ENST00000439453 SETD9Q8NE22 299 aa8.38□□□□□ -1.07
HPS4-206ENST00000439453 OR2T12Q8NG77 320 aa8.38□□□□□ -1.07
HPS4-206ENST00000439453 RNF34Q969K3 372 aa8.38□□□□□ -1.07
HPS4-206ENST00000439453 TMEM169Q96HH4 297 aa8.38□□□□□ -1.07
HPS4-206ENST00000439453 ZNF560Q96MR9 790 aa8.38□□□□□ -1.07
HPS4-206ENST00000439453 ACOX2Q99424 681 aa8.38□□□□□ -1.07
HPS4-206ENST00000439453 SLC39A8Q9C0K1 460 aa8.38□□□□□ -1.07
HPS4-206ENST00000439453 TFB2MQ9H5Q4 396 aaKnown RBP8.38□□□□□ -1.07
HPS4-206ENST00000439453 ACOT13Q9NPJ3 140 aa8.38□□□□□ -1.07
HPS4-206ENST00000439453 N6AMT1Q9Y5N5 214 aa8.38□□□□□ -1.07
HPS4-206ENST00000439453 MN1Q10571 1320 aaPredicted RBP8.38□□□□□ -1.07
HPS4-206ENST00000439453 ANAPC1Q9H1A4 1944 aa8.38□□□□□ -1.07
HPS4-206ENST00000439453 EIF3FO00303 357 aaPredicted RBP8.37□□□□□ -1.07
HPS4-206ENST00000439453 ARNTLO00327 626 aa8.37□□□□□ -1.07
HPS4-206ENST00000439453 PAPSS2O95340 614 aaPredicted RBP8.37□□□□□ -1.07
HPS4-206ENST00000439453 VNN2O95498 520 aa8.37□□□□□ -1.07
HPS4-206ENST00000439453 CNPP09543 421 aaKnown RBP8.37□□□□□ -1.07
HPS4-206ENST00000439453 UROSP10746 265 aa8.37□□□□□ -1.07
HPS4-206ENST00000439453 ZNF37AP17032 561 aaPredicted RBP8.37□□□□□ -1.07
HPS4-206ENST00000439453 PFKLP17858 780 aa8.37□□□□□ -1.07
HPS4-206ENST00000439453 RPL9P32969 192 aaKnown RBP8.37□□□□□ -1.07
HPS4-206ENST00000439453 TGFBR2P37173 567 aa8.37□□□□□ -1.07
HPS4-206ENST00000439453 TAF6P49848 677 aa8.37□□□□□ -1.07
HPS4-206ENST00000439453 TSPY1Q01534 308 aa8.37□□□□□ -1.07
HPS4-206ENST00000439453 PWP1Q13610 501 aa8.37□□□□□ -1.07
HPS4-206ENST00000439453 PLEKHG6Q3KR16 790 aa8.37□□□□□ -1.07
HPS4-206ENST00000439453 C6orf136Q5SQH8 315 aa8.37□□□□□ -1.07
HPS4-206ENST00000439453 CES5AQ6NT32 575 aa8.37□□□□□ -1.07
HPS4-206ENST00000439453 PNCKQ6P2M8 343 aa8.37□□□□□ -1.07
HPS4-206ENST00000439453 TMEM184AQ6ZMB5 413 aa8.37□□□□□ -1.07
HPS4-206ENST00000439453 METTL4Q8N3J2 472 aa8.37□□□□□ -1.07
HPS4-206ENST00000439453 FAM193BQ96PV7 902 aaPredicted RBP8.37□□□□□ -1.07
HPS4-206ENST00000439453 RTP3Q9BQQ7 232 aa8.37□□□□□ -1.07
HPS4-206ENST00000439453 C6orf62Q9GZU0 229 aaPredicted RBP8.37□□□□□ -1.07
HPS4-206ENST00000439453 SIK2Q9H0K1 926 aa8.37□□□□□ -1.07
HPS4-206ENST00000439453 EPS8L2Q9H6S3 715 aa8.37□□□□□ -1.07
HPS4-206ENST00000439453 ARNT2Q9HBZ2 717 aa8.37□□□□□ -1.07
HPS4-206ENST00000439453 ITM2CQ9NQX7 267 aa8.37□□□□□ -1.07
HPS4-206ENST00000439453 ZNF221Q9UK13 617 aa8.37□□□□□ -1.07
HPS4-206ENST00000439453 KIF26AQ9ULI4 1882 aaPredicted RBP8.37□□□□□ -1.07
HPS4-206ENST00000439453 CLDN24A6NM45 220 aa8.37□□□□□ -1.07
HPS4-206ENST00000439453 RGS10O43665 173 aa8.37□□□□□ -1.07
HPS4-206ENST00000439453 CLCN4P51793 760 aa8.37□□□□□ -1.07
HPS4-206ENST00000439453 TUBA1BP68363 451 aa8.37□□□□□ -1.07
HPS4-206ENST00000439453 AGAP6Q5VW22 663 aa8.37□□□□□ -1.07
HPS4-206ENST00000439453 PDE12Q6L8Q7 609 aaKnown RBP8.37□□□□□ -1.07
HPS4-206ENST00000439453 PRSS55Q6UWB4 352 aaPredicted RBP8.37□□□□□ -1.07
HPS4-206ENST00000439453 TUBA1AQ71U36 451 aa8.37□□□□□ -1.07
HPS4-206ENST00000439453 GDPD3Q7L5L3 318 aa8.37□□□□□ -1.07
HPS4-206ENST00000439453 GALNT5Q7Z7M9 940 aa8.37□□□□□ -1.07
HPS4-206ENST00000439453 SYTL1Q8IYJ3 562 aa8.37□□□□□ -1.07
HPS4-206ENST00000439453 CELF2-AS1Q8N7Q2 184 aa8.37□□□□□ -1.07
HPS4-206ENST00000439453 EFHBQ8N7U6 833 aa8.37□□□□□ -1.07
HPS4-206ENST00000439453 IL17RDQ8NFM7 739 aa8.37□□□□□ -1.07
HPS4-206ENST00000439453 OR8J3Q8NGG0 315 aa8.37□□□□□ -1.07
HPS4-206ENST00000439453 NUDT8Q8WV74 236 aa8.37□□□□□ -1.07
HPS4-206ENST00000439453 FAM162AQ96A26 154 aa8.37□□□□□ -1.07
HPS4-206ENST00000439453 RHBDF1Q96CC6 855 aa8.37□□□□□ -1.07
HPS4-206ENST00000439453 SUSD3Q96L08 255 aa8.37□□□□□ -1.07
HPS4-206ENST00000439453 AGAP4Q96P64 663 aa8.37□□□□□ -1.07
HPS4-206ENST00000439453 KLHL5Q96PQ7 755 aa8.37□□□□□ -1.07
HPS4-206ENST00000439453 RHNO1Q9BSD3 238 aa8.37□□□□□ -1.07
HPS4-206ENST00000439453 TMEM45AQ9NWC5 275 aa8.37□□□□□ -1.07
HPS4-206ENST00000439453 MFN2O95140 757 aa8.37□□□□□ -1.07
HPS4-206ENST00000439453 ALOX12P18054 663 aa8.37□□□□□ -1.07
HPS4-206ENST00000439453 WARSP23381 471 aaKnown RBP8.37□□□□□ -1.07
HPS4-206ENST00000439453 NRIP1P48552 1158 aa8.37□□□□□ -1.07
HPS4-206ENST00000439453 CLK1P49759 484 aaKnown RBP8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms