RNA–Protein interactions for RNA: ENST00000428696.6

SGCE-204, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,409 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-204ENST00000428696 TRA2AQ13595 282 aaKnown RBP eCLIP14.09□□□□□ -0.15
SGCE-204ENST00000428696 FASTKQ14296 549 aaKnown RBP14.09□□□□□ -0.15
SGCE-204ENST00000428696 GRB7Q14451 532 aa14.09□□□□□ -0.15
SGCE-204ENST00000428696 ANKS6Q68DC2 871 aa14.09□□□□□ -0.15
SGCE-204ENST00000428696 SUSD1Q6UWL2 747 aa14.09□□□□□ -0.15
SGCE-204ENST00000428696 DCAKDQ8WVC6 231 aa14.09□□□□□ -0.15
SGCE-204ENST00000428696 GRAMD1AQ96CP6 724 aa14.09□□□□□ -0.15
SGCE-204ENST00000428696 RNF31Q96EP0 1072 aa14.09□□□□□ -0.15
SGCE-204ENST00000428696 MED8Q96G25 268 aa14.09□□□□□ -0.15
SGCE-204ENST00000428696 FUT8Q9BYC5 575 aa14.09□□□□□ -0.15
SGCE-204ENST00000428696 POPDC3Q9HBV1 291 aa14.09□□□□□ -0.15
SGCE-204ENST00000428696 WASF3Q9UPY6 502 aa14.09□□□□□ -0.15
SGCE-204ENST00000428696 PDE10AQ9Y233 779 aa14.09□□□□□ -0.15
SGCE-204ENST00000428696 ACOT9Q9Y305 439 aa14.09□□□□□ -0.15
SGCE-204ENST00000428696 TLDC2A0PJX2 215 aa14.08□□□□□ -0.15
SGCE-204ENST00000428696 TRIM49D1C9J1S8 452 aa14.08□□□□□ -0.15
SGCE-204ENST00000428696 MATN2O00339 956 aa14.08□□□□□ -0.15
SGCE-204ENST00000428696 KRT37O76014 449 aa14.08□□□□□ -0.15
SGCE-204ENST00000428696 TSPAN12O95859 305 aa14.08□□□□□ -0.15
SGCE-204ENST00000428696 SLC16A8O95907 504 aa14.08□□□□□ -0.15
SGCE-204ENST00000428696 C9P02748 559 aa14.08□□□□□ -0.15
SGCE-204ENST00000428696 PVRP15151 417 aa14.08□□□□□ -0.15
SGCE-204ENST00000428696 UGT2B7P16662 529 aa14.08□□□□□ -0.15
SGCE-204ENST00000428696 RPA3P35244 121 aaPredicted RBP14.08□□□□□ -0.15
SGCE-204ENST00000428696 SERPINB8P50452 374 aa14.08□□□□□ -0.15
SGCE-204ENST00000428696 PNLIPRP1P54315 467 aa14.08□□□□□ -0.15
SGCE-204ENST00000428696 CYP4F3Q08477 520 aa14.08□□□□□ -0.15
SGCE-204ENST00000428696 KCNAB1Q14722 419 aa14.08□□□□□ -0.15
SGCE-204ENST00000428696 TSNQ15631 228 aaKnown RBP14.08□□□□□ -0.15
SGCE-204ENST00000428696 PHKG1Q16816 387 aa14.08□□□□□ -0.15
SGCE-204ENST00000428696 TAF1BQ53T94 588 aaPredicted RBP14.08□□□□□ -0.15
SGCE-204ENST00000428696 EMBQ6PCB8 327 aa14.08□□□□□ -0.15
SGCE-204ENST00000428696 MBOAT1Q6ZNC8 495 aa14.08□□□□□ -0.15
SGCE-204ENST00000428696 CACTIN-AS1Q8N1I8 211 aa14.08□□□□□ -0.15
SGCE-204ENST00000428696 LINC01555Q8NAE3 123 aa14.08□□□□□ -0.15
SGCE-204ENST00000428696 OR2L8Q8NGY9 312 aa14.08□□□□□ -0.15
SGCE-204ENST00000428696 DLG3Q92796 817 aa14.08□□□□□ -0.15
SGCE-204ENST00000428696 EXT2Q93063 718 aa14.08□□□□□ -0.15
SGCE-204ENST00000428696 ZBTB9Q96C00 473 aa14.08□□□□□ -0.15
SGCE-204ENST00000428696 MIPEPQ99797 713 aa14.08□□□□□ -0.15
SGCE-204ENST00000428696 CTRCQ99895 268 aa14.08□□□□□ -0.15
SGCE-204ENST00000428696 EGFL8Q99944 293 aa14.08□□□□□ -0.15
SGCE-204ENST00000428696 RAB11FIP5Q9BXF6 653 aa14.08□□□□□ -0.15
SGCE-204ENST00000428696 SLC12A9Q9BXP2 914 aa14.08□□□□□ -0.15
SGCE-204ENST00000428696 RAB33BQ9H082 229 aa14.08□□□□□ -0.15
SGCE-204ENST00000428696 ATG10Q9H0Y0 220 aa14.08□□□□□ -0.15
SGCE-204ENST00000428696 POLR1BQ9H9Y6 1135 aa14.08□□□□□ -0.15
SGCE-204ENST00000428696 SNX15Q9NRS6 342 aa14.08□□□□□ -0.15
SGCE-204ENST00000428696 OCIAD1Q9NX40 245 aa14.08□□□□□ -0.15
SGCE-204ENST00000428696 SLC39A1Q9NY26 324 aa14.08□□□□□ -0.15
SGCE-204ENST00000428696 EPHA6Q9UF33 1036 aa14.08□□□□□ -0.15
SGCE-204ENST00000428696 IKZF3Q9UKT9 509 aa14.08□□□□□ -0.15
SGCE-204ENST00000428696 KLHL20Q9Y2M5 609 aa14.08□□□□□ -0.15
SGCE-204ENST00000428696 KNTC1P50748 2209 aa14.08□□□□□ -0.16
SGCE-204ENST00000428696 MN1Q10571 1320 aaPredicted RBP14.08□□□□□ -0.16
SGCE-204ENST00000428696 A0A096LPK6 155 aa14.07□□□□□ -0.16
SGCE-204ENST00000428696 HMX2A2RU54 273 aa14.07□□□□□ -0.16
SGCE-204ENST00000428696 TLCD2A6NGC4 264 aa14.07□□□□□ -0.16
SGCE-204ENST00000428696 NCF1BA6NI72 391 aaPredicted RBP14.07□□□□□ -0.16
SGCE-204ENST00000428696 ZNF839A8K0R7 811 aa14.07□□□□□ -0.16
SGCE-204ENST00000428696 NCF1CA8MVU1 366 aaPredicted RBP14.07□□□□□ -0.16
SGCE-204ENST00000428696 SLC16A5O15375 505 aa14.07□□□□□ -0.16
SGCE-204ENST00000428696 C2P06681 752 aa14.07□□□□□ -0.16
SGCE-204ENST00000428696 TUBBP07437 444 aa14.07□□□□□ -0.16
SGCE-204ENST00000428696 SNRPAP09012 282 aaKnown RBP14.07□□□□□ -0.16
SGCE-204ENST00000428696 NCF1P14598 390 aaPredicted RBP14.07□□□□□ -0.16
SGCE-204ENST00000428696 KIR2DS3Q14952 304 aa14.07□□□□□ -0.16
SGCE-204ENST00000428696 SPESP1Q6UW49 350 aa14.07□□□□□ -0.16
SGCE-204ENST00000428696 AENQ8WTP8 325 aaKnown RBP14.07□□□□□ -0.16
SGCE-204ENST00000428696 SLC22A18Q96BI1 424 aa14.07□□□□□ -0.16
SGCE-204ENST00000428696 LIN37Q96GY3 246 aaPredicted RBP14.07□□□□□ -0.16
SGCE-204ENST00000428696 CCDC138Q96M89 665 aa14.07□□□□□ -0.16
SGCE-204ENST00000428696 OR2A14Q96R47 310 aa14.07□□□□□ -0.16
SGCE-204ENST00000428696 CD180Q99467 661 aa14.07□□□□□ -0.16
SGCE-204ENST00000428696 EPB41L4BQ9H329 900 aa14.07□□□□□ -0.16
SGCE-204ENST00000428696 POMT2Q9UKY4 750 aa14.07□□□□□ -0.16
SGCE-204ENST00000428696 A0A087X1B8 175 aa14.07□□□□□ -0.16
SGCE-204ENST00000428696 MYO1CO00159 1063 aa14.07□□□□□ -0.16
SGCE-204ENST00000428696 HGSO14964 777 aaPredicted RBP14.07□□□□□ -0.16
SGCE-204ENST00000428696 PRAMEF10O60809 474 aa14.07□□□□□ -0.16
SGCE-204ENST00000428696 SLC35E2BP0CK96 405 aa14.07□□□□□ -0.16
SGCE-204ENST00000428696 PSMB5P28074 263 aa14.07□□□□□ -0.16
SGCE-204ENST00000428696 HSD17B2P37059 387 aa14.07□□□□□ -0.16
SGCE-204ENST00000428696 GLRBP48167 497 aa14.07□□□□□ -0.16
SGCE-204ENST00000428696 LSSP48449 732 aa14.07□□□□□ -0.16
SGCE-204ENST00000428696 SH3BP2P78314 561 aa14.07□□□□□ -0.16
SGCE-204ENST00000428696 SHC2P98077 582 aa14.07□□□□□ -0.16
SGCE-204ENST00000428696 IRF9Q00978 393 aa14.07□□□□□ -0.16
SGCE-204ENST00000428696 SP140Q13342 867 aa14.07□□□□□ -0.16
SGCE-204ENST00000428696 TMTC4Q5T4D3 741 aa14.07□□□□□ -0.16
SGCE-204ENST00000428696 TMEM164Q5U3C3 297 aa14.07□□□□□ -0.16
SGCE-204ENST00000428696 ARHGAP22Q7Z5H3 698 aa14.07□□□□□ -0.16
SGCE-204ENST00000428696 GPSM1Q86YR5 675 aa14.07□□□□□ -0.16
SGCE-204ENST00000428696 OR2W6PQ8NHA6 318 aa14.07□□□□□ -0.16
SGCE-204ENST00000428696 DENND1AQ8TEH3 1009 aa14.07□□□□□ -0.16
SGCE-204ENST00000428696 ZNF480Q8WV37 535 aa14.07□□□□□ -0.16
SGCE-204ENST00000428696 KCTD4Q8WVF5 259 aa14.07□□□□□ -0.16
SGCE-204ENST00000428696 SMPDL3AQ92484 453 aa14.07□□□□□ -0.16
SGCE-204ENST00000428696 N4BP2L2Q92802 583 aaPredicted RBP14.07□□□□□ -0.16
SGCE-204ENST00000428696 USP7Q93009 1102 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms