RNA–Protein interactions for RNA: ENST00000426246.2

USP42-203, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-203ENST00000426246 CTPS2Q9NRF8 586 aa13.07□□□□□ -0.32
USP42-203ENST00000426246 TSC22D4Q9Y3Q8 395 aa13.07□□□□□ -0.32
USP42-203ENST00000426246 GMPPBQ9Y5P6 360 aa13.07□□□□□ -0.32
USP42-203ENST00000426246 PLXNA4Q9HCM2 1894 aa13.07□□□□□ -0.32
USP42-203ENST00000426246 ABHD14A-ACY1A0A1B0GW23 586 aa13.07□□□□□ -0.32
USP42-203ENST00000426246 RASAL1O95294 804 aa13.07□□□□□ -0.32
USP42-203ENST00000426246 IGLV3-27P01718 113 aa13.07□□□□□ -0.32
USP42-203ENST00000426246 GNPDA1P46926 289 aa13.07□□□□□ -0.32
USP42-203ENST00000426246 TIAL1Q01085 375 aaKnown RBP eCLIP13.07□□□□□ -0.32
USP42-203ENST00000426246 SLC13A2Q13183 592 aa13.07□□□□□ -0.32
USP42-203ENST00000426246 AFMIDQ63HM1 303 aa13.07□□□□□ -0.32
USP42-203ENST00000426246 RAVER1Q8IY67 606 aaKnown RBP13.07□□□□□ -0.32
USP42-203ENST00000426246 MINDY1Q8N5J2 469 aa13.07□□□□□ -0.32
USP42-203ENST00000426246 OR5AK3PQ8NH89 298 aa13.07□□□□□ -0.32
USP42-203ENST00000426246 FNDC8Q8TC99 324 aa13.07□□□□□ -0.32
USP42-203ENST00000426246 L3HYPDHQ96EM0 354 aa13.07□□□□□ -0.32
USP42-203ENST00000426246 PAIP2BQ9ULR5 123 aaKnown RBP13.07□□□□□ -0.32
USP42-203ENST00000426246 DLGAP4Q9Y2H0 992 aa13.07□□□□□ -0.32
USP42-203ENST00000426246 TBC1D30Q9Y2I9 924 aa13.07□□□□□ -0.32
USP42-203ENST00000426246 SH3GLB1Q9Y371 365 aa13.07□□□□□ -0.32
USP42-203ENST00000426246 CHD5Q8TDI0 1954 aa13.07□□□□□ -0.32
USP42-203ENST00000426246 PRR23AA6NEV1 266 aa13.07□□□□□ -0.32
USP42-203ENST00000426246 C16orf96A6NNT2 1141 aa13.07□□□□□ -0.32
USP42-203ENST00000426246 H7C4K7 107 aa13.07□□□□□ -0.32
USP42-203ENST00000426246 RGS14O43566 566 aa13.07□□□□□ -0.32
USP42-203ENST00000426246 OTCP00480 354 aa13.07□□□□□ -0.32
USP42-203ENST00000426246 SPCS2Q15005 226 aa13.07□□□□□ -0.32
USP42-203ENST00000426246 NKG7Q16617 165 aa13.07□□□□□ -0.32
USP42-203ENST00000426246 SLC36A3Q495N2 470 aa13.07□□□□□ -0.32
USP42-203ENST00000426246 SLC39A11Q8N1S5 342 aa13.07□□□□□ -0.32
USP42-203ENST00000426246 WFDC5Q8TCV5 224 aa13.07□□□□□ -0.32
USP42-203ENST00000426246 PPP1R2P1Q96PQ5 205 aa13.07□□□□□ -0.32
USP42-203ENST00000426246 NODALQ96S42 347 aa13.07□□□□□ -0.32
USP42-203ENST00000426246 FUNDC2Q9BWH2 189 aa13.07□□□□□ -0.32
USP42-203ENST00000426246 TRIM54Q9BYV2 358 aa13.07□□□□□ -0.32
USP42-203ENST00000426246 GPRC5BQ9NZH0 403 aa13.07□□□□□ -0.32
USP42-203ENST00000426246 RHCGQ9UBD6 479 aa13.07□□□□□ -0.32
USP42-203ENST00000426246 PCDHA9Q9Y5H5 950 aa13.07□□□□□ -0.32
USP42-203ENST00000426246 FAM234BA2RU67 622 aa13.06□□□□□ -0.32
USP42-203ENST00000426246 IFRD1O00458 451 aaPredicted RBP13.06□□□□□ -0.32
USP42-203ENST00000426246 BCKDKO14874 412 aa13.06□□□□□ -0.32
USP42-203ENST00000426246 ZNF189O75820 626 aaPredicted RBP13.06□□□□□ -0.32
USP42-203ENST00000426246 ABLIM3O94929 683 aa13.06□□□□□ -0.32
USP42-203ENST00000426246 VIPP01282 170 aa13.06□□□□□ -0.32
USP42-203ENST00000426246 COX7A2P14406 83 aa13.06□□□□□ -0.32
USP42-203ENST00000426246 HOXD9P28356 352 aaPredicted RBP13.06□□□□□ -0.32
USP42-203ENST00000426246 CRATP43155 626 aa13.06□□□□□ -0.32
USP42-203ENST00000426246 PLA2G16P53816 162 aa13.06□□□□□ -0.32
USP42-203ENST00000426246 MEF2AQ02078 507 aaPredicted RBP13.06□□□□□ -0.32
USP42-203ENST00000426246 EPS8Q12929 822 aa13.06□□□□□ -0.32
USP42-203ENST00000426246 NFATC3Q12968 1075 aa13.06□□□□□ -0.32
USP42-203ENST00000426246 RGS21Q2M5E4 152 aa13.06□□□□□ -0.32
USP42-203ENST00000426246 USP41Q3LFD5 358 aa13.06□□□□□ -0.32
USP42-203ENST00000426246 ZDHHC21Q8IVQ6 265 aa13.06□□□□□ -0.32
USP42-203ENST00000426246 KCNC2Q96PR1 638 aa13.06□□□□□ -0.32
USP42-203ENST00000426246 UGT2B28Q9BY64 529 aa13.06□□□□□ -0.32
USP42-203ENST00000426246 DERL2Q9GZP9 239 aa13.06□□□□□ -0.32
USP42-203ENST00000426246 LOC285095A0A1B0GVY8 99 aa13.06□□□□□ -0.32
USP42-203ENST00000426246 DLGAP1O14490 977 aa13.06□□□□□ -0.32
USP42-203ENST00000426246 TPST2O60704 377 aa13.06□□□□□ -0.32
USP42-203ENST00000426246 PGLSO95336 258 aa13.06□□□□□ -0.32
USP42-203ENST00000426246 SEC24AO95486 1093 aa13.06□□□□□ -0.32
USP42-203ENST00000426246 IGFBP5P24593 272 aa13.06□□□□□ -0.32
USP42-203ENST00000426246 OPRL1P41146 370 aa13.06□□□□□ -0.32
USP42-203ENST00000426246 RAPSNQ13702 412 aa13.06□□□□□ -0.32
USP42-203ENST00000426246 RCAN2Q14206 197 aa13.06□□□□□ -0.32
USP42-203ENST00000426246 CLECL1Q8IZS7 167 aa13.06□□□□□ -0.32
USP42-203ENST00000426246 C10orf111Q8N326 155 aa13.06□□□□□ -0.32
USP42-203ENST00000426246 ARL10Q8N8L6 244 aa13.06□□□□□ -0.32
USP42-203ENST00000426246 BIRC8Q96P09 236 aa13.06□□□□□ -0.32
USP42-203ENST00000426246 MCMBPQ9BTE3 642 aa13.06□□□□□ -0.32
USP42-203ENST00000426246 SLC2A11Q9BYW1 496 aa13.06□□□□□ -0.32
USP42-203ENST00000426246 ARIH1Q9Y4X5 557 aaPredicted RBP13.06□□□□□ -0.32
USP42-203ENST00000426246 E2F3O00716 465 aa13.06□□□□□ -0.32
USP42-203ENST00000426246 ZSCAN9O15535 394 aaPredicted RBP13.06□□□□□ -0.32
USP42-203ENST00000426246 SOD2P04179 222 aa13.06□□□□□ -0.32
USP42-203ENST00000426246 NFKB2Q00653 900 aa13.06□□□□□ -0.32
USP42-203ENST00000426246 TAF1AQ15573 450 aaPredicted RBP13.06□□□□□ -0.32
USP42-203ENST00000426246 ATP6AP1Q15904 470 aa13.06□□□□□ -0.32
USP42-203ENST00000426246 UBE2R2Q712K3 238 aaPredicted RBP13.06□□□□□ -0.32
USP42-203ENST00000426246 UBE2Q1Q7Z7E8 422 aa13.06□□□□□ -0.32
USP42-203ENST00000426246 PIK3C3Q8NEB9 887 aa13.06□□□□□ -0.32
USP42-203ENST00000426246 HM13Q8TCT9 377 aa13.06□□□□□ -0.32
USP42-203ENST00000426246 SORCS1Q8WY21 1168 aa13.06□□□□□ -0.32
USP42-203ENST00000426246 OTULINQ96BN8 352 aa13.06□□□□□ -0.32
USP42-203ENST00000426246 OTUB1Q96FW1 271 aaPredicted RBP13.06□□□□□ -0.32
USP42-203ENST00000426246 C1orf74Q96LT6 269 aa13.06□□□□□ -0.32
USP42-203ENST00000426246 ASB2Q96Q27 587 aa13.06□□□□□ -0.32
USP42-203ENST00000426246 VPS51Q9UID3 782 aa13.06□□□□□ -0.32
USP42-203ENST00000426246 STK16O75716 305 aa13.05□□□□□ -0.32
USP42-203ENST00000426246 RAP2AP10114 183 aa13.05□□□□□ -0.32
USP42-203ENST00000426246 CDH3P22223 829 aa13.05□□□□□ -0.32
USP42-203ENST00000426246 MYF6P23409 242 aa13.05□□□□□ -0.32
USP42-203ENST00000426246 PTGER1P34995 402 aa13.05□□□□□ -0.32
USP42-203ENST00000426246 IRF8Q02556 426 aa13.05□□□□□ -0.32
USP42-203ENST00000426246 SOWAHCQ53LP3 525 aaPredicted RBP13.05□□□□□ -0.32
USP42-203ENST00000426246 LCN8Q6JVE9 175 aa13.05□□□□□ -0.32
USP42-203ENST00000426246 SERPINA13PQ6UXR4 307 aa13.05□□□□□ -0.32
USP42-203ENST00000426246 SPATA19Q7Z5L4 167 aa13.05□□□□□ -0.32
USP42-203ENST00000426246 TMEM179BQ7Z7N9 219 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms