RNA–Protein interactions for RNA: ENST00000423636.6

PTPRN-204, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRN, Length 3,313 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-204ENST00000423636 FAM234BA2RU67 622 aa11.62□□□□□ -0.55
PTPRN-204ENST00000423636 KLK8O60259 260 aa11.62□□□□□ -0.55
PTPRN-204ENST00000423636 OR56A5P0C7T3 313 aa11.62□□□□□ -0.55
PTPRN-204ENST00000423636 ELFN1P0C7U0 828 aa11.62□□□□□ -0.55
PTPRN-204ENST00000423636 TIMP2P16035 220 aa11.62□□□□□ -0.55
PTPRN-204ENST00000423636 MC1RQ01726 317 aa11.62□□□□□ -0.55
PTPRN-204ENST00000423636 HKDC1Q2TB90 917 aa11.62□□□□□ -0.55
PTPRN-204ENST00000423636 SPATA19Q7Z5L4 167 aa11.62□□□□□ -0.55
PTPRN-204ENST00000423636 VTCN1Q7Z7D3 282 aa11.62□□□□□ -0.55
PTPRN-204ENST00000423636 PLD3Q8IV08 490 aa11.62□□□□□ -0.55
PTPRN-204ENST00000423636 MRPL43Q8N983 215 aaKnown RBP11.62□□□□□ -0.55
PTPRN-204ENST00000423636 OR4K1Q8NGD4 311 aa11.62□□□□□ -0.55
PTPRN-204ENST00000423636 NETO1Q8TDF5 533 aa11.62□□□□□ -0.55
PTPRN-204ENST00000423636 ZNF583Q96ND8 569 aa11.62□□□□□ -0.55
PTPRN-204ENST00000423636 MACROD1Q9BQ69 325 aa11.62□□□□□ -0.55
PTPRN-204ENST00000423636 HTATIP2Q9BUP3 242 aa11.62□□□□□ -0.55
PTPRN-204ENST00000423636 PKD2L2Q9NZM6 624 aa11.62□□□□□ -0.55
PTPRN-204ENST00000423636 STOML2Q9UJZ1 356 aa11.62□□□□□ -0.55
PTPRN-204ENST00000423636 EIF3LQ9Y262 564 aaKnown RBP11.62□□□□□ -0.55
PTPRN-204ENST00000423636 C16orf96A6NNT2 1141 aa11.61□□□□□ -0.55
PTPRN-204ENST00000423636 ARHGEF33A8MVX0 844 aa11.61□□□□□ -0.55
PTPRN-204ENST00000423636 VILLO15195 856 aa11.61□□□□□ -0.55
PTPRN-204ENST00000423636 YY2O15391 372 aa11.61□□□□□ -0.55
PTPRN-204ENST00000423636 CLOCKO15516 846 aa11.61□□□□□ -0.55
PTPRN-204ENST00000423636 RGS14O43566 566 aa11.61□□□□□ -0.55
PTPRN-204ENST00000423636 MITFO75030 526 aaPredicted RBP11.61□□□□□ -0.55
PTPRN-204ENST00000423636 TGFB1P01137 390 aa11.61□□□□□ -0.55
PTPRN-204ENST00000423636 OPN1SWP03999 348 aa11.61□□□□□ -0.55
PTPRN-204ENST00000423636 LINC00271P0C7V0 271 aa11.61□□□□□ -0.55
PTPRN-204ENST00000423636 PRR35P0CG20 571 aa11.61□□□□□ -0.55
PTPRN-204ENST00000423636 MTHFRP42898 656 aa11.61□□□□□ -0.55
PTPRN-204ENST00000423636 SLC7A9P82251 487 aa11.61□□□□□ -0.55
PTPRN-204ENST00000423636 HID1Q8IV36 788 aa11.61□□□□□ -0.55
PTPRN-204ENST00000423636 RAVER1Q8IY67 606 aaKnown RBP11.61□□□□□ -0.55
PTPRN-204ENST00000423636 OR5AK3PQ8NH89 298 aa11.61□□□□□ -0.55
PTPRN-204ENST00000423636 JPH3Q8WXH2 748 aaPredicted RBP11.61□□□□□ -0.55
PTPRN-204ENST00000423636 GTF2H4Q92759 462 aa11.61□□□□□ -0.55
PTPRN-204ENST00000423636 TMBIM1Q969X1 311 aa11.61□□□□□ -0.55
PTPRN-204ENST00000423636 ADI1Q9BV57 179 aa11.61□□□□□ -0.55
PTPRN-204ENST00000423636 SLC6A17Q9H1V8 727 aa11.61□□□□□ -0.55
PTPRN-204ENST00000423636 ACTR3BQ9P1U1 418 aa11.61□□□□□ -0.55
PTPRN-204ENST00000423636 C5AR2Q9P296 337 aa11.61□□□□□ -0.55
PTPRN-204ENST00000423636 GBF1Q92538 1859 aa11.61□□□□□ -0.55
PTPRN-204ENST00000423636 CKAP5Q14008 2032 aa11.61□□□□□ -0.55
PTPRN-204ENST00000423636 PTGES3LE9PB15 166 aa11.61□□□□□ -0.55
PTPRN-204ENST00000423636 GFRA2O00451 464 aa11.61□□□□□ -0.55
PTPRN-204ENST00000423636 ANKRD28O15084 1053 aa11.61□□□□□ -0.55
PTPRN-204ENST00000423636 NME6O75414 186 aaPredicted RBP11.61□□□□□ -0.55
PTPRN-204ENST00000423636 E2F6O75461 281 aa11.61□□□□□ -0.55
PTPRN-204ENST00000423636 EEDO75530 441 aaKnown RBP11.61□□□□□ -0.55
PTPRN-204ENST00000423636 GNRH1P01148 92 aa11.61□□□□□ -0.55
PTPRN-204ENST00000423636 ACPPP15309 386 aa11.61□□□□□ -0.55
PTPRN-204ENST00000423636 PCBP2Q15366 365 aaKnown RBP eCLIP11.61□□□□□ -0.55
PTPRN-204ENST00000423636 FNDC3BQ53EP0 1204 aaKnown RBP11.61□□□□□ -0.55
PTPRN-204ENST00000423636 ARMC3Q5W041 872 aa11.61□□□□□ -0.55
PTPRN-204ENST00000423636 GET4Q7L5D6 327 aaPredicted RBP11.61□□□□□ -0.55
PTPRN-204ENST00000423636 TMEM179BQ7Z7N9 219 aa11.61□□□□□ -0.55
PTPRN-204ENST00000423636 TMPRSS11BQ86T26 416 aa11.61□□□□□ -0.55
PTPRN-204ENST00000423636 MARVELD2Q8N4S9 558 aa11.61□□□□□ -0.55
PTPRN-204ENST00000423636 OTUB1Q96FW1 271 aaPredicted RBP11.61□□□□□ -0.55
PTPRN-204ENST00000423636 MUS81Q96NY9 551 aa11.61□□□□□ -0.55
PTPRN-204ENST00000423636 HAUS8Q9BT25 410 aa11.61□□□□□ -0.55
PTPRN-204ENST00000423636 SH3BP4Q9P0V3 963 aa11.61□□□□□ -0.55
PTPRN-204ENST00000423636 CDC14AQ9UNH5 594 aa11.61□□□□□ -0.55
PTPRN-204ENST00000423636 CCL27Q9Y4X3 112 aa11.61□□□□□ -0.55
PTPRN-204ENST00000423636 KCNH1O95259 989 aa11.6□□□□□ -0.55
PTPRN-204ENST00000423636 MATN4O95460 622 aa11.6□□□□□ -0.55
PTPRN-204ENST00000423636 HOXB8P17481 243 aaPredicted RBP11.6□□□□□ -0.55
PTPRN-204ENST00000423636 SOX9P48436 509 aa11.6□□□□□ -0.55
PTPRN-204ENST00000423636 VAC14Q08AM6 782 aa11.6□□□□□ -0.55
PTPRN-204ENST00000423636 TTLL9Q3SXZ7 439 aa11.6□□□□□ -0.55
PTPRN-204ENST00000423636 TMEM31Q5JXX7 168 aa11.6□□□□□ -0.55
PTPRN-204ENST00000423636 RAET1GQ6H3X3 334 aa11.6□□□□□ -0.55
PTPRN-204ENST00000423636 DUS1LQ6P1R4 473 aaKnown RBP11.6□□□□□ -0.55
PTPRN-204ENST00000423636 PARS2Q7L3T8 475 aaKnown RBP11.6□□□□□ -0.55
PTPRN-204ENST00000423636 ZNF551Q7Z340 670 aaPredicted RBP11.6□□□□□ -0.55
PTPRN-204ENST00000423636 SLC44A2Q8IWA5 706 aaPredicted RBP11.6□□□□□ -0.55
PTPRN-204ENST00000423636 TPD52L3Q96J77 140 aa11.6□□□□□ -0.55
PTPRN-204ENST00000423636 ARMC7Q9H6L4 198 aa11.6□□□□□ -0.55
PTPRN-204ENST00000423636 KCTD5Q9NXV2 234 aa11.6□□□□□ -0.55
PTPRN-204ENST00000423636 ABCD2Q9UBJ2 740 aa11.6□□□□□ -0.55
PTPRN-204ENST00000423636 ACSL6Q9UKU0 697 aa11.6□□□□□ -0.55
PTPRN-204ENST00000423636 SPTBP11277 2137 aa11.6□□□□□ -0.55
PTPRN-204ENST00000423636 WASHC1A8K0Z3 465 aa11.6□□□□□ -0.55
PTPRN-204ENST00000423636 MAGEB17A8MXT2 336 aa11.6□□□□□ -0.55
PTPRN-204ENST00000423636 TULP3O75386 442 aa11.6□□□□□ -0.55
PTPRN-204ENST00000423636 SERPINA1P01009 418 aa11.6□□□□□ -0.55
PTPRN-204ENST00000423636 CA3P07451 260 aa11.6□□□□□ -0.55
PTPRN-204ENST00000423636 FSHRP23945 695 aa11.6□□□□□ -0.55
PTPRN-204ENST00000423636 AOAHP28039 575 aa11.6□□□□□ -0.55
PTPRN-204ENST00000423636 IRX1P78414 480 aaPredicted RBP11.6□□□□□ -0.55
PTPRN-204ENST00000423636 EMX2Q04743 252 aa11.6□□□□□ -0.55
PTPRN-204ENST00000423636 DHCR24Q15392 516 aa11.6□□□□□ -0.55
PTPRN-204ENST00000423636 CMPK2Q5EBM0 449 aa11.6□□□□□ -0.55
PTPRN-204ENST00000423636 NHSL2Q5HYW2 709 aa11.6□□□□□ -0.55
PTPRN-204ENST00000423636 CACHD1Q5VU97 1274 aa11.6□□□□□ -0.55
PTPRN-204ENST00000423636 ZCCHC8Q6NZY4 707 aaKnown RBP11.6□□□□□ -0.55
PTPRN-204ENST00000423636 WASH2PQ6VEQ5 465 aa11.6□□□□□ -0.55
PTPRN-204ENST00000423636 C11orf96Q7Z7L8 435 aa11.6□□□□□ -0.55
PTPRN-204ENST00000423636 CHERPQ8IWX8 916 aaKnown RBP11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms