RNA–Protein interactions for RNA: ENST00000422991.1

COL7A1-202, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-202ENST00000422991 ARHGAP19Q14CB8 494 aa16.46■□□□□ 0.23
COL7A1-202ENST00000422991 CLPPQ16740 277 aaPredicted RBP16.46■□□□□ 0.23
COL7A1-202ENST00000422991 TECRLQ5HYJ1 363 aa16.46■□□□□ 0.23
COL7A1-202ENST00000422991 ANKS6Q68DC2 871 aa16.46■□□□□ 0.23
COL7A1-202ENST00000422991 WDR74Q6RFH5 385 aaPredicted RBP16.46■□□□□ 0.23
COL7A1-202ENST00000422991 FRA10AC1Q70Z53 315 aa16.46■□□□□ 0.23
COL7A1-202ENST00000422991 OOSP2Q86WS3 158 aa16.46■□□□□ 0.23
COL7A1-202ENST00000422991 GPSM1Q86YR5 675 aa16.46■□□□□ 0.23
COL7A1-202ENST00000422991 RAB42Q8N4Z0 105 aa16.46■□□□□ 0.23
COL7A1-202ENST00000422991 LMNTD1Q8N9Z9 388 aa16.46■□□□□ 0.23
COL7A1-202ENST00000422991 RHEBL1Q8TAI7 183 aa16.46■□□□□ 0.23
COL7A1-202ENST00000422991 HMGCLL1Q8TB92 370 aa16.46■□□□□ 0.23
COL7A1-202ENST00000422991 STAG3L4Q8TBR4 150 aa16.46■□□□□ 0.23
COL7A1-202ENST00000422991 ZNF480Q8WV37 535 aa16.46■□□□□ 0.23
COL7A1-202ENST00000422991 ZBTB9Q96C00 473 aa16.46■□□□□ 0.23
COL7A1-202ENST00000422991 PGM2Q96G03 612 aa16.46■□□□□ 0.23
COL7A1-202ENST00000422991 HIST1H2AHQ96KK5 128 aa16.46■□□□□ 0.23
COL7A1-202ENST00000422991 CCDC138Q96M89 665 aa16.46■□□□□ 0.23
COL7A1-202ENST00000422991 TSNARE1Q96NA8 513 aa16.46■□□□□ 0.23
COL7A1-202ENST00000422991 GFM1Q96RP9 751 aaKnown RBP16.46■□□□□ 0.23
COL7A1-202ENST00000422991 ATOH8Q96SQ7 321 aa16.46■□□□□ 0.23
COL7A1-202ENST00000422991 RUFY1Q96T51 708 aa16.46■□□□□ 0.23
COL7A1-202ENST00000422991 HIST1H2AJQ99878 128 aa16.46■□□□□ 0.23
COL7A1-202ENST00000422991 H2AFJQ9BTM1 129 aa16.46■□□□□ 0.23
COL7A1-202ENST00000422991 ABCG4Q9H172 646 aa16.46■□□□□ 0.23
COL7A1-202ENST00000422991 SYNDIG1Q9H7V2 258 aa16.46■□□□□ 0.23
COL7A1-202ENST00000422991 VIPAS39Q9H9C1 493 aa16.46■□□□□ 0.23
COL7A1-202ENST00000422991 UTP6Q9NYH9 597 aaKnown RBP16.46■□□□□ 0.23
COL7A1-202ENST00000422991 STOX2Q9P2F5 926 aaPredicted RBP16.46■□□□□ 0.23
COL7A1-202ENST00000422991 ATXN7L1Q9ULK2 861 aaPredicted RBP16.46■□□□□ 0.23
COL7A1-202ENST00000422991 RNF112Q9ULX5 631 aa16.46■□□□□ 0.23
COL7A1-202ENST00000422991 MN1Q10571 1320 aaPredicted RBP16.45■□□□□ 0.22
COL7A1-202ENST00000422991 GSTA1P08263 222 aa16.45■□□□□ 0.22
COL7A1-202ENST00000422991 CHRM5P08912 532 aaPredicted RBP16.45■□□□□ 0.22
COL7A1-202ENST00000422991 KRT4P19013 534 aa16.45■□□□□ 0.22
COL7A1-202ENST00000422991 POLR2CP19387 275 aaPredicted RBP16.45■□□□□ 0.22
COL7A1-202ENST00000422991 PEBP1P30086 187 aaKnown RBP16.45■□□□□ 0.22
COL7A1-202ENST00000422991 HSD17B2P37059 387 aa16.45■□□□□ 0.22
COL7A1-202ENST00000422991 KCNC1P48547 511 aa16.45■□□□□ 0.22
COL7A1-202ENST00000422991 PPM1FP49593 454 aaPredicted RBP16.45■□□□□ 0.22
COL7A1-202ENST00000422991 KPNA2P52292 529 aaKnown RBP16.45■□□□□ 0.22
COL7A1-202ENST00000422991 PNLIPRP1P54315 467 aa16.45■□□□□ 0.22
COL7A1-202ENST00000422991 PPP1CAP62136 330 aa16.45■□□□□ 0.22
COL7A1-202ENST00000422991 INSM1Q01101 510 aaPredicted RBP16.45■□□□□ 0.22
COL7A1-202ENST00000422991 SPIDRQ14159 915 aa16.45■□□□□ 0.22
COL7A1-202ENST00000422991 TGFBIQ15582 683 aa16.45■□□□□ 0.22
COL7A1-202ENST00000422991 TNFAIP8L3Q5GJ75 292 aa16.45■□□□□ 0.22
COL7A1-202ENST00000422991 TMPRSS9Q7Z410 1059 aa16.45■□□□□ 0.22
COL7A1-202ENST00000422991 SRRM1Q8IYB3 904 aaKnown RBP16.45■□□□□ 0.22
COL7A1-202ENST00000422991 C4orf33Q8N1A6 199 aa16.45■□□□□ 0.22
COL7A1-202ENST00000422991 FBXL8Q96CD0 374 aa16.45■□□□□ 0.22
COL7A1-202ENST00000422991 DPYSL5Q9BPU6 564 aa16.45■□□□□ 0.22
COL7A1-202ENST00000422991 NUDT22Q9BRQ3 303 aa16.45■□□□□ 0.22
COL7A1-202ENST00000422991 RAB33BQ9H082 229 aa16.45■□□□□ 0.22
COL7A1-202ENST00000422991 HRASLS2Q9NWW9 162 aa16.45■□□□□ 0.22
COL7A1-202ENST00000422991 MKS1Q9NXB0 559 aa16.45■□□□□ 0.22
COL7A1-202ENST00000422991 EPHA6Q9UF33 1036 aa16.45■□□□□ 0.22
COL7A1-202ENST00000422991 LNPEPQ9UIQ6 1025 aa16.45■□□□□ 0.22
COL7A1-202ENST00000422991 SNRNP200O75643 2136 aaKnown RBP16.45■□□□□ 0.22
COL7A1-202ENST00000422991 ZNF839A8K0R7 811 aa16.44■□□□□ 0.22
COL7A1-202ENST00000422991 AGPSO00116 658 aa16.44■□□□□ 0.22
COL7A1-202ENST00000422991 MATN2O00339 956 aa16.44■□□□□ 0.22
COL7A1-202ENST00000422991 GLRA3O75311 464 aa16.44■□□□□ 0.22
COL7A1-202ENST00000422991 GUCA1CO95843 209 aa16.44■□□□□ 0.22
COL7A1-202ENST00000422991 MYZAPP0CAP1 466 aa16.44■□□□□ 0.22
COL7A1-202ENST00000422991 GFERP55789 205 aa16.44■□□□□ 0.22
COL7A1-202ENST00000422991 FASTKQ14296 549 aaKnown RBP16.44■□□□□ 0.22
COL7A1-202ENST00000422991 CDKL4Q5MAI5 379 aa16.44■□□□□ 0.22
COL7A1-202ENST00000422991 ARMC6Q6NXE6 501 aa16.44■□□□□ 0.22
COL7A1-202ENST00000422991 DHRS13Q6UX07 377 aa16.44■□□□□ 0.22
COL7A1-202ENST00000422991 USP53Q70EK8 1073 aa16.44■□□□□ 0.22
COL7A1-202ENST00000422991 TAX1BP1Q86VP1 789 aa16.44■□□□□ 0.22
COL7A1-202ENST00000422991 PLXDC1Q8IUK5 500 aa16.44■□□□□ 0.22
COL7A1-202ENST00000422991 LRRC56Q8IYG6 542 aaPredicted RBP16.44■□□□□ 0.22
COL7A1-202ENST00000422991 NCSTNQ92542 709 aa16.44■□□□□ 0.22
COL7A1-202ENST00000422991 EXT2Q93063 718 aa16.44■□□□□ 0.22
COL7A1-202ENST00000422991 SCYL1Q96KG9 808 aa16.44■□□□□ 0.22
COL7A1-202ENST00000422991 ZMYND15Q9H091 742 aa16.44■□□□□ 0.22
COL7A1-202ENST00000422991 CENPHQ9H3R5 247 aa16.44■□□□□ 0.22
COL7A1-202ENST00000422991 SPHK1Q9NYA1 384 aa16.44■□□□□ 0.22
COL7A1-202ENST00000422991 NUDT4Q9NZJ9 180 aa16.44■□□□□ 0.22
COL7A1-202ENST00000422991 TMEM9Q9P0T7 183 aa16.44■□□□□ 0.22
COL7A1-202ENST00000422991 SENP1Q9P0U3 644 aa16.44■□□□□ 0.22
COL7A1-202ENST00000422991 XPR1Q9UBH6 696 aa16.44■□□□□ 0.22
COL7A1-202ENST00000422991 POMT2Q9UKY4 750 aa16.44■□□□□ 0.22
COL7A1-202ENST00000422991 ENTPD2Q9Y5L3 495 aa16.44■□□□□ 0.22
COL7A1-202ENST00000422991 ADAMTS20P59510 1910 aa16.43■□□□□ 0.22
COL7A1-202ENST00000422991 PIPSLA2A3N6 862 aa16.43■□□□□ 0.22
COL7A1-202ENST00000422991 GSAPA4D1B5 854 aa16.43■□□□□ 0.22
COL7A1-202ENST00000422991 SYCE1LA8MT33 242 aa16.43■□□□□ 0.22
COL7A1-202ENST00000422991 C2orf74A8MZ97 194 aa16.43■□□□□ 0.22
COL7A1-202ENST00000422991 E7ENX8 843 aa16.43■□□□□ 0.22
COL7A1-202ENST00000422991 UBXN8O00124 270 aa16.43■□□□□ 0.22
COL7A1-202ENST00000422991 TK2O00142 265 aa16.43■□□□□ 0.22
COL7A1-202ENST00000422991 C9P02748 559 aa16.43■□□□□ 0.22
COL7A1-202ENST00000422991 ANXA5P08758 320 aa16.43■□□□□ 0.22
COL7A1-202ENST00000422991 RBP1P09455 135 aa16.43■□□□□ 0.22
COL7A1-202ENST00000422991 HOXB3P14651 431 aaPredicted RBP16.43■□□□□ 0.22
COL7A1-202ENST00000422991 CRHR1P34998 444 aa16.43■□□□□ 0.22
COL7A1-202ENST00000422991 PDX1P52945 283 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms