RNA–Protein interactions for RNA: ENST00000420996.2

UPF3AP3-201, Transcript of UPF3A pseudogene 3, humanhuman

BASIC

Gene UPF3AP3, Length 769 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP3-201ENST00000420996 PLAGL1Q9UM63 463 aa16.2■□□□□ 0.18
UPF3AP3-201ENST00000420996 DIDO1Q9BTC0 2240 aaKnown RBP16.19■□□□□ 0.18
UPF3AP3-201ENST00000420996 A0A1B0GX78 115 aa16.19■□□□□ 0.18
UPF3AP3-201ENST00000420996 CCDC78A2IDD5 438 aa16.19■□□□□ 0.18
UPF3AP3-201ENST00000420996 MROH6A6NGR9 719 aa16.19■□□□□ 0.18
UPF3AP3-201ENST00000420996 SOCS6O14544 535 aa16.19■□□□□ 0.18
UPF3AP3-201ENST00000420996 LRRTM2O43300 516 aa16.19■□□□□ 0.18
UPF3AP3-201ENST00000420996 TJP3O95049 919 aa16.19■□□□□ 0.18
UPF3AP3-201ENST00000420996 OR56A5P0C7T3 313 aa16.19■□□□□ 0.18
UPF3AP3-201ENST00000420996 MAGP20916 626 aa16.19■□□□□ 0.18
UPF3AP3-201ENST00000420996 MSNP26038 577 aaKnown RBP16.19■□□□□ 0.18
UPF3AP3-201ENST00000420996 CETN2P41208 172 aa16.19■□□□□ 0.18
UPF3AP3-201ENST00000420996 TSFMP43897 325 aaKnown RBP16.19■□□□□ 0.18
UPF3AP3-201ENST00000420996 SPA17Q15506 151 aa16.19■□□□□ 0.18
UPF3AP3-201ENST00000420996 IRAK1BP1Q5VVH5 260 aa16.19■□□□□ 0.18
UPF3AP3-201ENST00000420996 NAPRTQ6XQN6 538 aa16.19■□□□□ 0.18
UPF3AP3-201ENST00000420996 ARHGEF18Q6ZSZ5 1173 aa16.19■□□□□ 0.18
UPF3AP3-201ENST00000420996 FAM20CQ8IXL6 584 aa16.19■□□□□ 0.18
UPF3AP3-201ENST00000420996 GRHL3Q8TE85 626 aa16.19■□□□□ 0.18
UPF3AP3-201ENST00000420996 SPSB2Q99619 263 aa16.19■□□□□ 0.18
UPF3AP3-201ENST00000420996 SLC26A1Q9H2B4 701 aa16.19■□□□□ 0.18
UPF3AP3-201ENST00000420996 MRM3Q9HC36 420 aaKnown RBP16.19■□□□□ 0.18
UPF3AP3-201ENST00000420996 LUC7LQ9NQ29 371 aaKnown RBP16.19■□□□□ 0.18
UPF3AP3-201ENST00000420996 CDC23Q9UJX2 597 aa16.19■□□□□ 0.18
UPF3AP3-201ENST00000420996 HS3ST3B1Q9Y662 390 aa16.19■□□□□ 0.18
UPF3AP3-201ENST00000420996 ZGRF1Q86YA3 2104 aa16.19■□□□□ 0.18
UPF3AP3-201ENST00000420996 E2F3O00716 465 aa16.18■□□□□ 0.18
UPF3AP3-201ENST00000420996 DSCR3O14972 297 aa16.18■□□□□ 0.18
UPF3AP3-201ENST00000420996 ALOX12BO75342 701 aa16.18■□□□□ 0.18
UPF3AP3-201ENST00000420996 METTL18O95568 372 aa16.18■□□□□ 0.18
UPF3AP3-201ENST00000420996 EDN3P14138 238 aa16.18■□□□□ 0.18
UPF3AP3-201ENST00000420996 TNFRSF8P28908 595 aa16.18■□□□□ 0.18
UPF3AP3-201ENST00000420996 PKLRP30613 574 aa16.18■□□□□ 0.18
UPF3AP3-201ENST00000420996 FOXN2P32314 431 aa16.18■□□□□ 0.18
UPF3AP3-201ENST00000420996 RAB28P51157 221 aa16.18■□□□□ 0.18
UPF3AP3-201ENST00000420996 RWDD2BP57060 319 aa16.18■□□□□ 0.18
UPF3AP3-201ENST00000420996 ZNF169Q14929 603 aaPredicted RBP16.18■□□□□ 0.18
UPF3AP3-201ENST00000420996 NKG7Q16617 165 aa16.18■□□□□ 0.18
UPF3AP3-201ENST00000420996 DNAJC21Q5F1R6 531 aaKnown RBP16.18■□□□□ 0.18
UPF3AP3-201ENST00000420996 YOD1Q5VVQ6 348 aaPredicted RBP16.18■□□□□ 0.18
UPF3AP3-201ENST00000420996 B3GNTL1Q67FW5 361 aaPredicted RBP16.18■□□□□ 0.18
UPF3AP3-201ENST00000420996 KIRREL2Q6UWL6 708 aa16.18■□□□□ 0.18
UPF3AP3-201ENST00000420996 CCDC170Q8IYT3 715 aa16.18■□□□□ 0.18
UPF3AP3-201ENST00000420996 FAR1Q8WVX9 515 aa16.18■□□□□ 0.18
UPF3AP3-201ENST00000420996 SLC22A18Q96BI1 424 aa16.18■□□□□ 0.18
UPF3AP3-201ENST00000420996 VPS50Q96JG6 964 aa16.18■□□□□ 0.18
UPF3AP3-201ENST00000420996 CALR3Q96L12 384 aaKnown RBP16.18■□□□□ 0.18
UPF3AP3-201ENST00000420996 LHPPQ9H008 270 aa16.18■□□□□ 0.18
UPF3AP3-201ENST00000420996 ENAMQ9NRM1 1142 aa16.18■□□□□ 0.18
UPF3AP3-201ENST00000420996 IMPACTQ9P2X3 320 aa16.18■□□□□ 0.18
UPF3AP3-201ENST00000420996 OSGIN2Q9Y236 505 aa16.18■□□□□ 0.18
UPF3AP3-201ENST00000420996 KLHL20Q9Y2M5 609 aa16.18■□□□□ 0.18
UPF3AP3-201ENST00000420996 CNTRLQ7Z7A1 2325 aa16.17■□□□□ 0.18
UPF3AP3-201ENST00000420996 OR51F1A6NGY5 319 aa16.17■□□□□ 0.18
UPF3AP3-201ENST00000420996 F8W8V4 182 aa16.17■□□□□ 0.18
UPF3AP3-201ENST00000420996 PSMD3O43242 534 aa16.17■□□□□ 0.18
UPF3AP3-201ENST00000420996 HNRNPRO43390 633 aaKnown RBP16.17■□□□□ 0.18
UPF3AP3-201ENST00000420996 CDC16Q13042 620 aa16.17■□□□□ 0.18
UPF3AP3-201ENST00000420996 GRM7Q14831 915 aa16.17■□□□□ 0.18
UPF3AP3-201ENST00000420996 TUBB8Q3ZCM7 444 aa16.17■□□□□ 0.18
UPF3AP3-201ENST00000420996 ZC3H12BQ5HYM0 836 aaKnown RBP16.17■□□□□ 0.18
UPF3AP3-201ENST00000420996 TCTE1Q5JU00 501 aa16.17■□□□□ 0.18
UPF3AP3-201ENST00000420996 COX15Q7KZN9 410 aa16.17■□□□□ 0.18
UPF3AP3-201ENST00000420996 PARP9Q8IXQ6 854 aa16.17■□□□□ 0.18
UPF3AP3-201ENST00000420996 SRRM1Q8IYB3 904 aaKnown RBP16.17■□□□□ 0.18
UPF3AP3-201ENST00000420996 SLC22A15Q8IZD6 547 aa16.17■□□□□ 0.18
UPF3AP3-201ENST00000420996 TC2NQ8N9U0 490 aa16.17■□□□□ 0.18
UPF3AP3-201ENST00000420996 FAM71DQ8N9W8 422 aa16.17■□□□□ 0.18
UPF3AP3-201ENST00000420996 LINC01555Q8NAE3 123 aa16.17■□□□□ 0.18
UPF3AP3-201ENST00000420996 MENTQ9BUN1 341 aa16.17■□□□□ 0.18
UPF3AP3-201ENST00000420996 EPS8L2Q9H6S3 715 aa16.17■□□□□ 0.18
UPF3AP3-201ENST00000420996 SEMA3GQ9NS98 782 aa16.17■□□□□ 0.18
UPF3AP3-201ENST00000420996 CUTCQ9NTM9 273 aa16.17■□□□□ 0.18
UPF3AP3-201ENST00000420996 INTS7Q9NVH2 962 aaKnown RBP16.17■□□□□ 0.18
UPF3AP3-201ENST00000420996 PIH1D1Q9NWS0 290 aaKnown RBP16.17■□□□□ 0.18
UPF3AP3-201ENST00000420996 IL1RAPL1Q9NZN1 696 aa16.17■□□□□ 0.18
UPF3AP3-201ENST00000420996 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.17■□□□□ 0.18
UPF3AP3-201ENST00000420996 NXT1Q9UKK6 140 aaKnown RBP16.17■□□□□ 0.18
UPF3AP3-201ENST00000420996 CCDC162PA2VCL2 907 aa16.16■□□□□ 0.18
UPF3AP3-201ENST00000420996 OR1I1O60431 355 aa16.16■□□□□ 0.18
UPF3AP3-201ENST00000420996 S1PR4O95977 384 aa16.16■□□□□ 0.18
UPF3AP3-201ENST00000420996 RPN2P04844 631 aa16.16■□□□□ 0.18
UPF3AP3-201ENST00000420996 CD9P21926 228 aa16.16■□□□□ 0.18
UPF3AP3-201ENST00000420996 TLR1Q15399 786 aa16.16■□□□□ 0.18
UPF3AP3-201ENST00000420996 ZRSR2Q15696 482 aaKnown RBP16.16■□□□□ 0.18
UPF3AP3-201ENST00000420996 P3H1Q32P28 736 aa16.16■□□□□ 0.18
UPF3AP3-201ENST00000420996 AADACL2Q6P093 401 aa16.16■□□□□ 0.18
UPF3AP3-201ENST00000420996 FIGLAQ6QHK4 219 aa16.16■□□□□ 0.18
UPF3AP3-201ENST00000420996 ZDHHC19Q8WVZ1 309 aaPredicted RBP16.16■□□□□ 0.18
UPF3AP3-201ENST00000420996 CNDP1Q96KN2 507 aa16.16■□□□□ 0.18
UPF3AP3-201ENST00000420996 TTC1Q99614 292 aa16.16■□□□□ 0.18
UPF3AP3-201ENST00000420996 ENTPD4Q9Y227 616 aa16.16■□□□□ 0.18
UPF3AP3-201ENST00000420996 GPC4O75487 556 aa16.15■□□□□ 0.18
UPF3AP3-201ENST00000420996 MCM3P25205 808 aa16.15■□□□□ 0.18
UPF3AP3-201ENST00000420996 CCR7P32248 378 aa16.15■□□□□ 0.18
UPF3AP3-201ENST00000420996 CYLC1P35663 651 aaPredicted RBP16.15■□□□□ 0.18
UPF3AP3-201ENST00000420996 GRIA3P42263 894 aa16.15■□□□□ 0.18
UPF3AP3-201ENST00000420996 CSE1LP55060 971 aaKnown RBP16.15■□□□□ 0.18
UPF3AP3-201ENST00000420996 RBBP7Q16576 425 aa16.15■□□□□ 0.18
UPF3AP3-201ENST00000420996 FAM214AQ32MH5 1076 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms