RNA–Protein interactions for RNA: ENST00000412272.6

HERC4-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-205ENST00000412272 RLN2P04090 185 aa5.12□□□□□ -1.59
HERC4-205ENST00000412272 ACSM4P0C7M7 580 aa5.12□□□□□ -1.59
HERC4-205ENST00000412272 TMIGD3P0DMS9 266 aaPredicted RBP5.12□□□□□ -1.59
HERC4-205ENST00000412272 IGFBP5P24593 272 aa5.12□□□□□ -1.59
HERC4-205ENST00000412272 ATP5A1P25705 553 aaKnown RBP5.12□□□□□ -1.59
HERC4-205ENST00000412272 MAPK4P31152 587 aa5.12□□□□□ -1.59
HERC4-205ENST00000412272 PTPN7P35236 360 aa5.12□□□□□ -1.59
HERC4-205ENST00000412272 VEGFCP49767 419 aa5.12□□□□□ -1.59
HERC4-205ENST00000412272 GPC5P78333 572 aa5.12□□□□□ -1.59
HERC4-205ENST00000412272 FGL1Q08830 312 aa5.12□□□□□ -1.59
HERC4-205ENST00000412272 ILF3Q12906 894 aaKnown RBP eCLIP5.12□□□□□ -1.591e-6■■■■□ 22.3
HERC4-205ENST00000412272 TKFCQ3LXA3 575 aa5.12□□□□□ -1.59
HERC4-205ENST00000412272 ATP13A4Q4VNC1 1196 aa5.12□□□□□ -1.59
HERC4-205ENST00000412272 TIGD3Q6B0B8 471 aa5.12□□□□□ -1.59
HERC4-205ENST00000412272 C16orf46Q6P387 395 aa5.12□□□□□ -1.59
HERC4-205ENST00000412272 TTC33Q6PID6 262 aaPredicted RBP5.12□□□□□ -1.59
HERC4-205ENST00000412272 ZZZ3Q8IYH5 903 aa5.12□□□□□ -1.59
HERC4-205ENST00000412272 GPR65Q8IYL9 337 aa5.12□□□□□ -1.59
HERC4-205ENST00000412272 ABRAQ8N0Z2 381 aa5.12□□□□□ -1.59
HERC4-205ENST00000412272 KYQ8NBH2 561 aa5.12□□□□□ -1.59
HERC4-205ENST00000412272 OR2L5Q8NG80 312 aa5.12□□□□□ -1.59
HERC4-205ENST00000412272 ETNPPLQ8TBG4 499 aa5.12□□□□□ -1.59
HERC4-205ENST00000412272 PHOSPHO1Q8TCT1 267 aa5.12□□□□□ -1.59
HERC4-205ENST00000412272 TFB1MQ8WVM0 346 aaKnown RBP5.12□□□□□ -1.59
HERC4-205ENST00000412272 ELMO1Q92556 727 aa5.12□□□□□ -1.59
HERC4-205ENST00000412272 MYO19Q96H55 970 aa5.12□□□□□ -1.59
HERC4-205ENST00000412272 ZDHHC15Q96MV8 337 aa5.12□□□□□ -1.59
HERC4-205ENST00000412272 RILPQ96NA2 401 aa5.12□□□□□ -1.59
HERC4-205ENST00000412272 HBEGFQ99075 208 aa5.12□□□□□ -1.59
HERC4-205ENST00000412272 TRMOQ9BU70 441 aa5.12□□□□□ -1.59
HERC4-205ENST00000412272 THAP2Q9H0W7 228 aa5.12□□□□□ -1.59
HERC4-205ENST00000412272 DSN1Q9H410 356 aa5.12□□□□□ -1.59
HERC4-205ENST00000412272 HEXA-AS1Q9H8Q6 139 aa5.12□□□□□ -1.59
HERC4-205ENST00000412272 ARMT1Q9H993 441 aa5.12□□□□□ -1.59
HERC4-205ENST00000412272 MKNK2Q9HBH9 465 aa5.12□□□□□ -1.59
HERC4-205ENST00000412272 CAPN10Q9HC96 672 aa5.12□□□□□ -1.59
HERC4-205ENST00000412272 ZSCAN32Q9NX65 697 aa5.12□□□□□ -1.59
HERC4-205ENST00000412272 MLXQ9UH92 298 aa5.12□□□□□ -1.59
HERC4-205ENST00000412272 DRG1Q9Y295 367 aaKnown RBP5.12□□□□□ -1.59
HERC4-205ENST00000412272 TP53TG5Q9Y2B4 290 aa5.12□□□□□ -1.59
HERC4-205ENST00000412272 PCDHA8Q9Y5H6 950 aa5.12□□□□□ -1.59
HERC4-205ENST00000412272 BACE2Q9Y5Z0 518 aa5.12□□□□□ -1.59
HERC4-205ENST00000412272 NHSQ6T4R5 1651 aa5.12□□□□□ -1.59
HERC4-205ENST00000412272 GSG1L2A8MUP6 293 aa5.12□□□□□ -1.59
HERC4-205ENST00000412272 H7C2Y5 167 aa5.12□□□□□ -1.59
HERC4-205ENST00000412272 M0QYV0 167 aa5.12□□□□□ -1.59
HERC4-205ENST00000412272 CDC7O00311 574 aa5.12□□□□□ -1.59
HERC4-205ENST00000412272 IFNGP01579 166 aa5.12□□□□□ -1.59
HERC4-205ENST00000412272 AHSGP02765 367 aa5.12□□□□□ -1.59
HERC4-205ENST00000412272 TYRP1P17643 537 aa5.12□□□□□ -1.59
HERC4-205ENST00000412272 COMTP21964 271 aa5.12□□□□□ -1.59
HERC4-205ENST00000412272 GLDCP23378 1020 aa5.12□□□□□ -1.59
HERC4-205ENST00000412272 XKP51811 444 aa5.12□□□□□ -1.59
HERC4-205ENST00000412272 PLA2G16P53816 162 aa5.12□□□□□ -1.59
HERC4-205ENST00000412272 RBX1P62877 108 aa5.12□□□□□ -1.59
HERC4-205ENST00000412272 MPP1Q00013 466 aa5.12□□□□□ -1.59
HERC4-205ENST00000412272 ZP2Q05996 745 aa5.12□□□□□ -1.59
HERC4-205ENST00000412272 SLC14A1Q13336 389 aa5.12□□□□□ -1.59
HERC4-205ENST00000412272 FAM98BQ52LJ0 330 aaKnown RBP5.12□□□□□ -1.59
HERC4-205ENST00000412272 LBHQ53QV2 105 aaPredicted RBP5.12□□□□□ -1.59
HERC4-205ENST00000412272 IZUMO3Q5VZ72 239 aa5.12□□□□□ -1.59
HERC4-205ENST00000412272 KRT25Q7Z3Z0 450 aa5.12□□□□□ -1.59
HERC4-205ENST00000412272 REC114Q7Z4M0 266 aa5.12□□□□□ -1.59
HERC4-205ENST00000412272 NUDT13Q86X67 352 aa5.12□□□□□ -1.59
HERC4-205ENST00000412272 BLOC1S5Q8TDH9 187 aa5.12□□□□□ -1.59
HERC4-205ENST00000412272 LARP4BQ92615 738 aaKnown RBP5.12□□□□□ -1.59
HERC4-205ENST00000412272 TRMT61AQ96FX7 289 aaKnown RBP5.12□□□□□ -1.59
HERC4-205ENST00000412272 RHOVQ96L33 236 aa5.12□□□□□ -1.59
HERC4-205ENST00000412272 TBCDQ9BTW9 1192 aa5.12□□□□□ -1.59
HERC4-205ENST00000412272 STRA6Q9BX79 667 aa5.12□□□□□ -1.59
HERC4-205ENST00000412272 PRRG3Q9BZD7 231 aa5.12□□□□□ -1.59
HERC4-205ENST00000412272 ELOVL6Q9H5J4 265 aa5.12□□□□□ -1.59
HERC4-205ENST00000412272 KCMF1Q9P0J7 381 aa5.12□□□□□ -1.59
HERC4-205ENST00000412272 SH3BP4Q9P0V3 963 aa5.12□□□□□ -1.59
HERC4-205ENST00000412272 MYEF2Q9P2K5 600 aaKnown RBP5.12□□□□□ -1.59
HERC4-205ENST00000412272 AJAP1Q9UKB5 411 aaPredicted RBP5.12□□□□□ -1.59
HERC4-205ENST00000412272 ARFGEF1Q9Y6D6 1849 aa5.12□□□□□ -1.59
HERC4-205ENST00000412272 METTL15A6NJ78 407 aa5.12□□□□□ -1.59
HERC4-205ENST00000412272 RHPN2P1A8MT19 583 aa5.12□□□□□ -1.59
HERC4-205ENST00000412272 ZNF879B4DU55 563 aa5.12□□□□□ -1.59
HERC4-205ENST00000412272 TRIM49D1C9J1S8 452 aa5.12□□□□□ -1.59
HERC4-205ENST00000412272 K7ERQ8 282 aa5.12□□□□□ -1.59
HERC4-205ENST00000412272 DLGAP1O14490 977 aa5.12□□□□□ -1.59
HERC4-205ENST00000412272 CD3EAPO15446 510 aaKnown RBP5.12□□□□□ -1.59
HERC4-205ENST00000412272 RECQL4O94761 1208 aa5.12□□□□□ -1.59
HERC4-205ENST00000412272 EOMESO95936 686 aa5.12□□□□□ -1.59
HERC4-205ENST00000412272 CRYABP02511 175 aaKnown RBP5.12□□□□□ -1.59
HERC4-205ENST00000412272 SNRPA1P09661 255 aaKnown RBP5.12□□□□□ -1.59
HERC4-205ENST00000412272 RD3LP0DJH9 198 aa5.12□□□□□ -1.59
HERC4-205ENST00000412272 RALBP11234 206 aa5.12□□□□□ -1.59
HERC4-205ENST00000412272 CCR7P32248 378 aa5.12□□□□□ -1.59
HERC4-205ENST00000412272 GGT5P36269 586 aa5.12□□□□□ -1.59
HERC4-205ENST00000412272 CRATP43155 626 aa5.12□□□□□ -1.59
HERC4-205ENST00000412272 NUTF2P61970 127 aaKnown RBP5.12□□□□□ -1.59
HERC4-205ENST00000412272 TIMM10P62072 90 aa5.12□□□□□ -1.59
HERC4-205ENST00000412272 EGR3Q06889 387 aa5.12□□□□□ -1.59
HERC4-205ENST00000412272 ERFEQ4G0M1 354 aa5.12□□□□□ -1.59
HERC4-205ENST00000412272 PAN2Q504Q3 1202 aaKnown RBP5.12□□□□□ -1.59
HERC4-205ENST00000412272 TCEAL6Q6IPX3 200 aa5.12□□□□□ -1.59
HERC4-205ENST00000412272 TIGD7Q6NT04 549 aaPredicted RBP5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms