RNA–Protein interactions for RNA: ENST00000411220.1

RNU4-88P-201, Transcript of RNA, U4 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU4-88P, Length 86 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-88P-201ENST00000411220 CEP350Q5VT06 3117 aa-1.71□□□□□ -2.68
RNU4-88P-201ENST00000411220 PLEKHG2Q9H7P9 1386 aa-1.71□□□□□ -2.68
RNU4-88P-201ENST00000411220 LAMC3Q9Y6N6 1575 aa-1.71□□□□□ -2.68
RNU4-88P-201ENST00000411220 A0A087X0B3 334 aa-1.71□□□□□ -2.68
RNU4-88P-201ENST00000411220 BLACEA4D250 179 aa-1.71□□□□□ -2.68
RNU4-88P-201ENST00000411220 K7ENM7 598 aa-1.71□□□□□ -2.68
RNU4-88P-201ENST00000411220 RHODO00212 210 aa-1.71□□□□□ -2.68
RNU4-88P-201ENST00000411220 SCAMP1O15126 338 aa-1.71□□□□□ -2.68
RNU4-88P-201ENST00000411220 KLK10O43240 276 aa-1.71□□□□□ -2.68
RNU4-88P-201ENST00000411220 DUX1O43812 170 aa-1.71□□□□□ -2.68
RNU4-88P-201ENST00000411220 FCGR3BO75015 233 aa-1.71□□□□□ -2.68
RNU4-88P-201ENST00000411220 SH3BGRLO75368 114 aa-1.71□□□□□ -2.68
RNU4-88P-201ENST00000411220 FCN3O75636 299 aa-1.71□□□□□ -2.68
RNU4-88P-201ENST00000411220 LY6HO94772 140 aa-1.71□□□□□ -2.68
RNU4-88P-201ENST00000411220 KLHL2O95198 593 aa-1.71□□□□□ -2.68
RNU4-88P-201ENST00000411220 NPPAP01160 153 aa-1.71□□□□□ -2.68
RNU4-88P-201ENST00000411220 CSF1P09603 554 aa-1.71□□□□□ -2.68
RNU4-88P-201ENST00000411220 GZMBP10144 247 aa-1.71□□□□□ -2.68
RNU4-88P-201ENST00000411220 DLATP10515 647 aaKnown RBP-1.71□□□□□ -2.68
RNU4-88P-201ENST00000411220 UMPSP11172 480 aa-1.71□□□□□ -2.68
RNU4-88P-201ENST00000411220 PDGFRAP16234 1089 aa-1.71□□□□□ -2.68
RNU4-88P-201ENST00000411220 ZNF23P17027 643 aa-1.71□□□□□ -2.68
RNU4-88P-201ENST00000411220 PTNP21246 168 aa-1.71□□□□□ -2.68
RNU4-88P-201ENST00000411220 EDNRBP24530 442 aa-1.71□□□□□ -2.68
RNU4-88P-201ENST00000411220 PCSK1P29120 753 aa-1.71□□□□□ -2.68
RNU4-88P-201ENST00000411220 PRKAR1BP31321 381 aa-1.71□□□□□ -2.68
RNU4-88P-201ENST00000411220 ADRA1AP35348 466 aa-1.71□□□□□ -2.68
RNU4-88P-201ENST00000411220 TDO2P48775 406 aa-1.71□□□□□ -2.68
RNU4-88P-201ENST00000411220 SLC11A1P49279 550 aa-1.71□□□□□ -2.68
RNU4-88P-201ENST00000411220 PPP2R2AP63151 447 aa-1.71□□□□□ -2.68
RNU4-88P-201ENST00000411220 RACK1P63244 317 aaKnown RBP-1.71□□□□□ -2.68
RNU4-88P-201ENST00000411220 SLC35A2P78381 396 aa-1.71□□□□□ -2.68
RNU4-88P-201ENST00000411220 PAX2Q02962 417 aa-1.71□□□□□ -2.68
RNU4-88P-201ENST00000411220 G3BP1Q13283 466 aaKnown RBP eCLIP-1.71□□□□□ -2.68
RNU4-88P-201ENST00000411220 KIAA0040Q15053 153 aa-1.71□□□□□ -2.68
RNU4-88P-201ENST00000411220 PGM5Q15124 567 aa-1.71□□□□□ -2.68
RNU4-88P-201ENST00000411220 RGNQ15493 299 aa-1.71□□□□□ -2.68
RNU4-88P-201ENST00000411220 DPYSL2Q16555 572 aa-1.71□□□□□ -2.68
RNU4-88P-201ENST00000411220 NFIL3Q16649 462 aa-1.71□□□□□ -2.68
RNU4-88P-201ENST00000411220 DUSP6Q16828 381 aa-1.71□□□□□ -2.68
RNU4-88P-201ENST00000411220 TMEM266Q2M3C6 531 aa-1.71□□□□□ -2.68
RNU4-88P-201ENST00000411220 SHROOM1Q2M3G4 852 aaPredicted RBP-1.71□□□□□ -2.68
RNU4-88P-201ENST00000411220 KRTCAP3Q53RY4 240 aa-1.71□□□□□ -2.68
RNU4-88P-201ENST00000411220 ZNF57Q68EA5 555 aaPredicted RBP-1.71□□□□□ -2.68
RNU4-88P-201ENST00000411220 WDR74Q6RFH5 385 aaPredicted RBP-1.71□□□□□ -2.68
RNU4-88P-201ENST00000411220 Q6ZVL8 140 aa-1.71□□□□□ -2.68
RNU4-88P-201ENST00000411220 TRPT1Q86TN4 253 aaKnown RBP-1.71□□□□□ -2.68
RNU4-88P-201ENST00000411220 FAM90A1Q86YD7 464 aa-1.71□□□□□ -2.68
RNU4-88P-201ENST00000411220 ODF3L1Q8IXM7 274 aa-1.71□□□□□ -2.68
RNU4-88P-201ENST00000411220 CCAR2Q8N163 923 aaKnown RBP-1.71□□□□□ -2.68
RNU4-88P-201ENST00000411220 LRRC43Q8N309 656 aa-1.71□□□□□ -2.68
RNU4-88P-201ENST00000411220 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP-1.71□□□□□ -2.68
RNU4-88P-201ENST00000411220 MIR7-3HGQ8N6C7 128 aa-1.71□□□□□ -2.68
RNU4-88P-201ENST00000411220 FAM156AQ8NDB6 213 aa-1.71□□□□□ -2.68
RNU4-88P-201ENST00000411220 OR51T1Q8NGJ9 327 aa-1.71□□□□□ -2.68
RNU4-88P-201ENST00000411220 OR2AJ1Q8NGZ0 328 aa-1.71□□□□□ -2.68
RNU4-88P-201ENST00000411220 NEIL3Q8TAT5 605 aa-1.71□□□□□ -2.68
RNU4-88P-201ENST00000411220 APOBEC4Q8WW27 367 aaKnown RBP-1.71□□□□□ -2.68
RNU4-88P-201ENST00000411220 JDP2Q8WYK2 163 aa-1.71□□□□□ -2.68
RNU4-88P-201ENST00000411220 CHCHD10Q8WYQ3 142 aaPredicted RBP-1.71□□□□□ -2.68
RNU4-88P-201ENST00000411220 FIG4Q92562 907 aa-1.71□□□□□ -2.68
RNU4-88P-201ENST00000411220 USP7Q93009 1102 aa-1.71□□□□□ -2.68
RNU4-88P-201ENST00000411220 AZIN2Q96A70 460 aa-1.71□□□□□ -2.68
RNU4-88P-201ENST00000411220 REXO5Q96IC2 774 aaKnown RBP-1.71□□□□□ -2.68
RNU4-88P-201ENST00000411220 CLMNQ96JQ2 1002 aa-1.71□□□□□ -2.68
RNU4-88P-201ENST00000411220 ZNF597Q96LX8 424 aa-1.71□□□□□ -2.68
RNU4-88P-201ENST00000411220 DACH2Q96NX9 599 aa-1.71□□□□□ -2.68
RNU4-88P-201ENST00000411220 PUS7Q96PZ0 661 aaKnown RBP-1.71□□□□□ -2.68
RNU4-88P-201ENST00000411220 YPEL2Q96QA6 119 aa-1.71□□□□□ -2.68
RNU4-88P-201ENST00000411220 MCCC1Q96RQ3 725 aaPredicted RBP-1.71□□□□□ -2.68
RNU4-88P-201ENST00000411220 CRBNQ96SW2 442 aa-1.71□□□□□ -2.68
RNU4-88P-201ENST00000411220 GPA33Q99795 319 aa-1.71□□□□□ -2.68
RNU4-88P-201ENST00000411220 PDCD1LG2Q9BQ51 273 aa-1.71□□□□□ -2.68
RNU4-88P-201ENST00000411220 APOL5Q9BWW9 433 aa-1.71□□□□□ -2.68
RNU4-88P-201ENST00000411220 AGPAT4-IT1Q9H0P7 198 aa-1.71□□□□□ -2.68
RNU4-88P-201ENST00000411220 AZI2Q9H6S1 392 aa-1.71□□□□□ -2.68
RNU4-88P-201ENST00000411220 GPN1Q9HCN4 374 aaPredicted RBP-1.71□□□□□ -2.68
RNU4-88P-201ENST00000411220 CCNB1IP1Q9NPC3 277 aa-1.71□□□□□ -2.68
RNU4-88P-201ENST00000411220 CLEC5AQ9NY25 188 aa-1.71□□□□□ -2.68
RNU4-88P-201ENST00000411220 PIPOXQ9P0Z9 390 aa-1.71□□□□□ -2.68
RNU4-88P-201ENST00000411220 AFF4Q9UHB7 1163 aaKnown RBP-1.71□□□□□ -2.68
RNU4-88P-201ENST00000411220 DDX41Q9UJV9 622 aaKnown RBP-1.71□□□□□ -2.68
RNU4-88P-201ENST00000411220 DCTN4Q9UJW0 460 aa-1.71□□□□□ -2.68
RNU4-88P-201ENST00000411220 MKLN1Q9UL63 735 aa-1.71□□□□□ -2.68
RNU4-88P-201ENST00000411220 PPT2Q9UMR5 302 aa-1.71□□□□□ -2.68
RNU4-88P-201ENST00000411220 FAF1Q9UNN5 650 aaPredicted RBP-1.71□□□□□ -2.68
RNU4-88P-201ENST00000411220 MTMR6Q9Y217 621 aa-1.71□□□□□ -2.68
RNU4-88P-201ENST00000411220 VDAC3Q9Y277 283 aa-1.71□□□□□ -2.68
RNU4-88P-201ENST00000411220 SSX2IPQ9Y2D8 614 aa-1.71□□□□□ -2.68
RNU4-88P-201ENST00000411220 MAN2B2Q9Y2E5 1009 aa-1.71□□□□□ -2.68
RNU4-88P-201ENST00000411220 RPH3AQ9Y2J0 694 aaPredicted RBP-1.71□□□□□ -2.68
RNU4-88P-201ENST00000411220 MRPS18BQ9Y676 258 aaKnown RBP-1.71□□□□□ -2.68
RNU4-88P-201ENST00000411220 CACNG2Q9Y698 323 aa-1.71□□□□□ -2.68
RNU4-88P-201ENST00000411220 EXPH5Q8NEV8 1989 aa-1.71□□□□□ -2.68
RNU4-88P-201ENST00000411220 CLUHO75153 1309 aa-1.71□□□□□ -2.68
RNU4-88P-201ENST00000411220 RLFQ13129 1914 aa-1.72□□□□□ -2.68
RNU4-88P-201ENST00000411220 MAST2Q6P0Q8 1798 aa-1.72□□□□□ -2.68
RNU4-88P-201ENST00000411220 KIAA1671Q9BY89 1806 aa-1.72□□□□□ -2.68
RNU4-88P-201ENST00000411220 A0A096LNJ9 63 aa-1.72□□□□□ -2.68
RNU4-88P-201ENST00000411220 A0A1W2PRG6 482 aa-1.72□□□□□ -2.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms