RNA–Protein interactions for RNA: ENST00000409766.7

USP39-204, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,033 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-204ENST00000409766 AREL1O15033 823 aa19.59■□□□□ 0.73
USP39-204ENST00000409766 AKAP10O43572 662 aa19.59■□□□□ 0.73
USP39-204ENST00000409766 IL6P05231 212 aa19.59■□□□□ 0.73
USP39-204ENST00000409766 GPIP06744 558 aa19.59■□□□□ 0.73
USP39-204ENST00000409766 FSHRP23945 695 aa19.59■□□□□ 0.73
USP39-204ENST00000409766 MAP4P27816 1152 aaKnown RBP19.59■□□□□ 0.73
USP39-204ENST00000409766 OXTRP30559 389 aa19.59■□□□□ 0.73
USP39-204ENST00000409766 PREPP48147 710 aa19.59■□□□□ 0.73
USP39-204ENST00000409766 ELAVL3Q14576 367 aaKnown RBP19.59■□□□□ 0.73
USP39-204ENST00000409766 TMEM220Q6QAJ8 160 aa19.59■□□□□ 0.73
USP39-204ENST00000409766 KIAA1549LQ6ZVL6 1849 aa19.59■□□□□ 0.73
USP39-204ENST00000409766 KRTCAP2Q8N6L1 136 aa19.59■□□□□ 0.73
USP39-204ENST00000409766 ANKFN1Q8N957 763 aa19.59■□□□□ 0.73
USP39-204ENST00000409766 GTF2H4Q92759 462 aa19.59■□□□□ 0.73
USP39-204ENST00000409766 TMEM245Q9H330 911 aa19.59■□□□□ 0.73
USP39-204ENST00000409766 CERS4Q9HA82 394 aa19.59■□□□□ 0.73
USP39-204ENST00000409766 SERTM1A2A2V5 107 aa19.58■□□□□ 0.73
USP39-204ENST00000409766 NPIPB8E9PQR5 432 aa19.58■□□□□ 0.73
USP39-204ENST00000409766 KCNH1O95259 989 aa19.58■□□□□ 0.73
USP39-204ENST00000409766 PGRP06401 933 aa19.58■□□□□ 0.73
USP39-204ENST00000409766 NCK1P16333 377 aa19.58■□□□□ 0.73
USP39-204ENST00000409766 IL10P22301 178 aa19.58■□□□□ 0.73
USP39-204ENST00000409766 SELPLGQ14242 412 aa19.58■□□□□ 0.73
USP39-204ENST00000409766 ZNF234Q14588 700 aa19.58■□□□□ 0.73
USP39-204ENST00000409766 AASDHQ4L235 1098 aaPredicted RBP19.58■□□□□ 0.73
USP39-204ENST00000409766 SPANXN4Q5MJ08 99 aa19.58■□□□□ 0.73
USP39-204ENST00000409766 OR8J3Q8NGG0 315 aa19.58■□□□□ 0.73
USP39-204ENST00000409766 ZNF597Q96LX8 424 aa19.58■□□□□ 0.73
USP39-204ENST00000409766 MAGEB10Q96LZ2 347 aaPredicted RBP19.58■□□□□ 0.73
USP39-204ENST00000409766 FAM129BQ96TA1 746 aa19.58■□□□□ 0.73
USP39-204ENST00000409766 EPHX3Q9H6B9 360 aa19.58■□□□□ 0.73
USP39-204ENST00000409766 HPS4Q9NQG7 708 aa19.58■□□□□ 0.73
USP39-204ENST00000409766 DLGAP4Q9Y2H0 992 aa19.58■□□□□ 0.73
USP39-204ENST00000409766 AK5Q9Y6K8 562 aa19.58■□□□□ 0.73
USP39-204ENST00000409766 CROCCQ5TZA2 2017 aa19.58■□□□□ 0.72
USP39-204ENST00000409766 AP1G1O43747 822 aa19.58■□□□□ 0.72
USP39-204ENST00000409766 CHN2P52757 468 aa19.58■□□□□ 0.72
USP39-204ENST00000409766 OR4D2P58180 307 aa19.58■□□□□ 0.72
USP39-204ENST00000409766 MTPNP58546 118 aa19.58■□□□□ 0.72
USP39-204ENST00000409766 ELP6Q0PNE2 266 aa19.58■□□□□ 0.72
USP39-204ENST00000409766 CHIT1Q13231 466 aa19.58■□□□□ 0.72
USP39-204ENST00000409766 MAPKAPK3Q16644 382 aa19.58■□□□□ 0.72
USP39-204ENST00000409766 NRF1Q16656 503 aa19.58■□□□□ 0.72
USP39-204ENST00000409766 CYP51A1Q16850 503 aa19.58■□□□□ 0.72
USP39-204ENST00000409766 ZNF658BQ4V348 819 aaPredicted RBP19.58■□□□□ 0.72
USP39-204ENST00000409766 RALGPS2Q86X27 583 aaPredicted RBP19.58■□□□□ 0.72
USP39-204ENST00000409766 SLC22A15Q8IZD6 547 aa19.58■□□□□ 0.72
USP39-204ENST00000409766 CIB1Q99828 191 aa19.58■□□□□ 0.72
USP39-204ENST00000409766 UBAP1Q9NZ09 502 aa19.58■□□□□ 0.72
USP39-204ENST00000409766 VAPAQ9P0L0 249 aa19.58■□□□□ 0.72
USP39-204ENST00000409766 GULP1Q9UBP9 304 aa19.58■□□□□ 0.72
USP39-204ENST00000409766 PCDHB3Q9Y5E6 796 aa19.58■□□□□ 0.72
USP39-204ENST00000409766 REV3LO60673 3130 aa19.57■□□□□ 0.72
USP39-204ENST00000409766 C7orf72A4D263 438 aa19.57■□□□□ 0.72
USP39-204ENST00000409766 K7ESM1 405 aa19.57■□□□□ 0.72
USP39-204ENST00000409766 UGDHO60701 494 aa19.57■□□□□ 0.72
USP39-204ENST00000409766 RECQL5O94762 991 aaPredicted RBP19.57■□□□□ 0.72
USP39-204ENST00000409766 ADRB3P13945 408 aa19.57■□□□□ 0.72
USP39-204ENST00000409766 JUPP14923 745 aa19.57■□□□□ 0.72
USP39-204ENST00000409766 HRH2P25021 359 aa19.57■□□□□ 0.72
USP39-204ENST00000409766 HALP42357 657 aa19.57■□□□□ 0.72
USP39-204ENST00000409766 PLIN5Q00G26 463 aa19.57■□□□□ 0.72
USP39-204ENST00000409766 C6orf52Q5T4I8 152 aa19.57■□□□□ 0.72
USP39-204ENST00000409766 FRG2Q64ET8 278 aa19.57■□□□□ 0.72
USP39-204ENST00000409766 NAIF1Q69YI7 327 aaPredicted RBP19.57■□□□□ 0.72
USP39-204ENST00000409766 PROSER1Q86XN7 944 aa19.57■□□□□ 0.72
USP39-204ENST00000409766 PHC3Q8NDX5 983 aa19.57■□□□□ 0.72
USP39-204ENST00000409766 TRPV3Q8NET8 790 aa19.57■□□□□ 0.72
USP39-204ENST00000409766 FOXJ1Q92949 421 aa19.57■□□□□ 0.72
USP39-204ENST00000409766 CMTM7Q96FZ5 175 aa19.57■□□□□ 0.72
USP39-204ENST00000409766 CCDC138Q96M89 665 aa19.57■□□□□ 0.72
USP39-204ENST00000409766 FRG2BQ96QU4 278 aa19.57■□□□□ 0.72
USP39-204ENST00000409766 SLC29A1Q99808 456 aa19.57■□□□□ 0.72
USP39-204ENST00000409766 PIF1Q9H611 641 aa19.57■□□□□ 0.72
USP39-204ENST00000409766 RPF2Q9H7B2 306 aaKnown RBP19.57■□□□□ 0.72
USP39-204ENST00000409766 TRPV4Q9HBA0 871 aa19.57■□□□□ 0.72
USP39-204ENST00000409766 AGPAT4Q9NRZ5 378 aa19.57■□□□□ 0.72
USP39-204ENST00000409766 OBP2AQ9NY56 170 aa19.57■□□□□ 0.72
USP39-204ENST00000409766 COL4A3Q01955 1670 aa19.57■□□□□ 0.72
USP39-204ENST00000409766 KIF26AQ9ULI4 1882 aaPredicted RBP19.57■□□□□ 0.72
USP39-204ENST00000409766 PLK4O00444 970 aa19.56■□□□□ 0.72
USP39-204ENST00000409766 DFNA5O60443 496 aa19.56■□□□□ 0.72
USP39-204ENST00000409766 FCARP24071 287 aa19.56■□□□□ 0.72
USP39-204ENST00000409766 PDHA2P29803 388 aa19.56■□□□□ 0.72
USP39-204ENST00000409766 SOX11P35716 441 aa19.56■□□□□ 0.72
USP39-204ENST00000409766 CLDN8P56748 225 aa19.56■□□□□ 0.72
USP39-204ENST00000409766 RPS14P62263 151 aaKnown RBP19.56■□□□□ 0.72
USP39-204ENST00000409766 CCSMST1Q4G0I0 132 aa19.56■□□□□ 0.72
USP39-204ENST00000409766 LIPJQ5W064 366 aa19.56■□□□□ 0.72
USP39-204ENST00000409766 ZNF765Q7L2R6 523 aa19.56■□□□□ 0.72
USP39-204ENST00000409766 GET4Q7L5D6 327 aaPredicted RBP19.56■□□□□ 0.72
USP39-204ENST00000409766 THOC6Q86W42 341 aaKnown RBP19.56■□□□□ 0.72
USP39-204ENST00000409766 TERB1Q8NA31 727 aa19.56■□□□□ 0.72
USP39-204ENST00000409766 CLHC1Q8NHS4 586 aa19.56■□□□□ 0.72
USP39-204ENST00000409766 ATL1Q8WXF7 558 aa19.56■□□□□ 0.72
USP39-204ENST00000409766 GDE1Q9NZC3 331 aa19.56■□□□□ 0.72
USP39-204ENST00000409766 STOX2Q9P2F5 926 aaPredicted RBP19.56■□□□□ 0.72
USP39-204ENST00000409766 YBX2Q9Y2T7 364 aaKnown RBP19.56■□□□□ 0.72
USP39-204ENST00000409766 DENND4AQ7Z401 1863 aa19.56■□□□□ 0.72
USP39-204ENST00000409766 NPC1O15118 1278 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms