RNA–Protein interactions for RNA: ENST00000409254.1

LIMS2-203, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3 BASIC

Gene LIMS2, Length 867 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-203ENST00000409254 BIRC2Q13490 618 aa12.64□□□□□ -0.39
LIMS2-203ENST00000409254 KIR2DS3Q14952 304 aa12.64□□□□□ -0.39
LIMS2-203ENST00000409254 SETDB1Q15047 1291 aa12.64□□□□□ -0.39
LIMS2-203ENST00000409254 STPG1Q5TH74 334 aa12.64□□□□□ -0.39
LIMS2-203ENST00000409254 ZYG11AQ6WRX3 759 aa12.64□□□□□ -0.39
LIMS2-203ENST00000409254 CDHR3Q6ZTQ4 885 aa12.64□□□□□ -0.39
LIMS2-203ENST00000409254 LRRC70Q7Z2Q7 622 aa12.64□□□□□ -0.39
LIMS2-203ENST00000409254 PIP4P1Q86T03 277 aa12.64□□□□□ -0.39
LIMS2-203ENST00000409254 AMIGO1Q86WK6 493 aa12.64□□□□□ -0.39
LIMS2-203ENST00000409254 KIRREL3Q8IZU9 778 aa12.64□□□□□ -0.39
LIMS2-203ENST00000409254 OR52E1Q8NGJ3 308 aa12.64□□□□□ -0.39
LIMS2-203ENST00000409254 OR56A3Q8NH54 315 aa12.64□□□□□ -0.39
LIMS2-203ENST00000409254 CFAP61Q8NHU2 1237 aa12.64□□□□□ -0.39
LIMS2-203ENST00000409254 RAB3IL1Q8TBN0 382 aa12.64□□□□□ -0.39
LIMS2-203ENST00000409254 TCP10LQ8TDR4 215 aa12.64□□□□□ -0.39
LIMS2-203ENST00000409254 LCN9Q8WX39 176 aa12.64□□□□□ -0.39
LIMS2-203ENST00000409254 SMPDL3AQ92484 453 aa12.64□□□□□ -0.39
LIMS2-203ENST00000409254 RHBDF1Q96CC6 855 aa12.64□□□□□ -0.39
LIMS2-203ENST00000409254 CD180Q99467 661 aa12.64□□□□□ -0.39
LIMS2-203ENST00000409254 HGH1Q9BTY7 390 aa12.64□□□□□ -0.39
LIMS2-203ENST00000409254 NKIRAS1Q9NYS0 192 aa12.64□□□□□ -0.39
LIMS2-203ENST00000409254 STOX2Q9P2F5 926 aaPredicted RBP12.64□□□□□ -0.39
LIMS2-203ENST00000409254 COPG2Q9UBF2 871 aa12.64□□□□□ -0.39
LIMS2-203ENST00000409254 FTSJ1Q9UET6 329 aa12.64□□□□□ -0.39
LIMS2-203ENST00000409254 PTBP2Q9UKA9 531 aaKnown RBP12.64□□□□□ -0.39
LIMS2-203ENST00000409254 ADAMTS6Q9UKP5 1117 aa12.64□□□□□ -0.39
LIMS2-203ENST00000409254 STK38LQ9Y2H1 464 aa12.64□□□□□ -0.39
LIMS2-203ENST00000409254 PCDHGA1Q9Y5H4 931 aa12.64□□□□□ -0.39
LIMS2-203ENST00000409254 U3KQA8 63 aa12.64□□□□□ -0.39
LIMS2-203ENST00000409254 SUPT3HB4E1H0 165 aa12.63□□□□□ -0.39
LIMS2-203ENST00000409254 DUX1O43812 170 aa12.63□□□□□ -0.39
LIMS2-203ENST00000409254 SUPT3HO75486 399 aa12.63□□□□□ -0.39
LIMS2-203ENST00000409254 CCNDBP1O95273 360 aa12.63□□□□□ -0.39
LIMS2-203ENST00000409254 LDOC1O95751 146 aaPredicted RBP12.63□□□□□ -0.39
LIMS2-203ENST00000409254 SBK3P0C264 359 aa12.63□□□□□ -0.39
LIMS2-203ENST00000409254 MYL2P10916 166 aa12.63□□□□□ -0.39
LIMS2-203ENST00000409254 NR1D1P20393 614 aa12.63□□□□□ -0.39
LIMS2-203ENST00000409254 CSRP1P21291 193 aaKnown RBP12.63□□□□□ -0.39
LIMS2-203ENST00000409254 HRH2P25021 359 aa12.63□□□□□ -0.39
LIMS2-203ENST00000409254 BDKRB1P46663 353 aa12.63□□□□□ -0.39
LIMS2-203ENST00000409254 CAPZBP47756 277 aa12.63□□□□□ -0.39
LIMS2-203ENST00000409254 SLC6A12P48065 614 aa12.63□□□□□ -0.39
LIMS2-203ENST00000409254 GLRBP48167 497 aa12.63□□□□□ -0.39
LIMS2-203ENST00000409254 PNLIPRP1P54315 467 aa12.63□□□□□ -0.39
LIMS2-203ENST00000409254 MAZP56270 477 aaKnown RBP12.63□□□□□ -0.39
LIMS2-203ENST00000409254 PPP2R2AP63151 447 aa12.63□□□□□ -0.39
LIMS2-203ENST00000409254 PLCL1Q15111 1095 aa12.63□□□□□ -0.39
LIMS2-203ENST00000409254 PCBP2Q15366 365 aaKnown RBP eCLIP12.63□□□□□ -0.391e-20■■■■■ 37.6
LIMS2-203ENST00000409254 DUS1LQ6P1R4 473 aaKnown RBP12.63□□□□□ -0.39
LIMS2-203ENST00000409254 RAB44Q7Z6P3 723 aaPredicted RBP12.63□□□□□ -0.39
LIMS2-203ENST00000409254 OOSP2Q86WS3 158 aa12.63□□□□□ -0.39
LIMS2-203ENST00000409254 FBXO39Q8N4B4 442 aa12.63□□□□□ -0.39
LIMS2-203ENST00000409254 CHCHD4Q8N4Q1 142 aa12.63□□□□□ -0.39
LIMS2-203ENST00000409254 EID2Q8N6I1 236 aa12.63□□□□□ -0.39
LIMS2-203ENST00000409254 OR2I1PQ8NGU4 316 aa12.63□□□□□ -0.39
LIMS2-203ENST00000409254 OR10G6Q8NH81 332 aa12.63□□□□□ -0.39
LIMS2-203ENST00000409254 DENND1AQ8TEH3 1009 aa12.63□□□□□ -0.39
LIMS2-203ENST00000409254 PATE1Q8WXA2 126 aa12.63□□□□□ -0.39
LIMS2-203ENST00000409254 L3HYPDHQ96EM0 354 aa12.63□□□□□ -0.39
LIMS2-203ENST00000409254 SLC38A3Q99624 504 aa12.63□□□□□ -0.39
LIMS2-203ENST00000409254 HAUS8Q9BT25 410 aa12.63□□□□□ -0.39
LIMS2-203ENST00000409254 TRMOQ9BU70 441 aa12.63□□□□□ -0.39
LIMS2-203ENST00000409254 SGPP1Q9BX95 441 aa12.63□□□□□ -0.39
LIMS2-203ENST00000409254 CAPS2Q9BXY5 557 aa12.63□□□□□ -0.39
LIMS2-203ENST00000409254 SRMSQ9H3Y6 488 aa12.63□□□□□ -0.39
LIMS2-203ENST00000409254 CCDC177Q9NQR7 707 aaPredicted RBP12.63□□□□□ -0.39
LIMS2-203ENST00000409254 CD274Q9NZQ7 290 aa12.63□□□□□ -0.39
LIMS2-203ENST00000409254 LRIT1Q9P2V4 623 aa12.63□□□□□ -0.39
LIMS2-203ENST00000409254 IKZF3Q9UKT9 509 aa12.63□□□□□ -0.39
LIMS2-203ENST00000409254 ICKQ9UPZ9 632 aa12.63□□□□□ -0.39
LIMS2-203ENST00000409254 KLK4Q9Y5K2 254 aa12.63□□□□□ -0.39
LIMS2-203ENST00000409254 CFAP20Q9Y6A4 193 aaKnown RBP12.63□□□□□ -0.39
LIMS2-203ENST00000409254 MN1Q10571 1320 aaPredicted RBP12.62□□□□□ -0.39
LIMS2-203ENST00000409254 E7ENX8 843 aa12.62□□□□□ -0.39
LIMS2-203ENST00000409254 PPM1DO15297 605 aa12.62□□□□□ -0.39
LIMS2-203ENST00000409254 TOX3O15405 576 aaPredicted RBP12.62□□□□□ -0.39
LIMS2-203ENST00000409254 TNFSF14O43557 240 aa12.62□□□□□ -0.39
LIMS2-203ENST00000409254 TOP3BO95985 862 aaKnown RBP12.62□□□□□ -0.39
LIMS2-203ENST00000409254 GFAPP14136 432 aa12.62□□□□□ -0.39
LIMS2-203ENST00000409254 CPA3P15088 417 aa12.62□□□□□ -0.39
LIMS2-203ENST00000409254 RPA3P35244 121 aaPredicted RBP12.62□□□□□ -0.39
LIMS2-203ENST00000409254 HERVK_113P63132 956 aa12.62□□□□□ -0.39
LIMS2-203ENST00000409254 TAP2Q03519 686 aa12.62□□□□□ -0.39
LIMS2-203ENST00000409254 LIPMQ5VYY2 423 aa12.62□□□□□ -0.39
LIMS2-203ENST00000409254 CAPN13Q6MZZ7 669 aaPredicted RBP12.62□□□□□ -0.39
LIMS2-203ENST00000409254 WDR74Q6RFH5 385 aaPredicted RBP12.62□□□□□ -0.39
LIMS2-203ENST00000409254 AGTRAPQ6RW13 159 aa12.62□□□□□ -0.39
LIMS2-203ENST00000409254 SPRED1Q7Z699 444 aa12.62□□□□□ -0.39
LIMS2-203ENST00000409254 SYTL1Q8IYJ3 562 aa12.62□□□□□ -0.39
LIMS2-203ENST00000409254 SPATA6LQ8N4H0 392 aa12.62□□□□□ -0.39
LIMS2-203ENST00000409254 SETD7Q8WTS6 366 aaKnown RBP12.62□□□□□ -0.39
LIMS2-203ENST00000409254 ZNF480Q8WV37 535 aa12.62□□□□□ -0.39
LIMS2-203ENST00000409254 CNDP2Q96KP4 475 aaKnown RBP12.62□□□□□ -0.39
LIMS2-203ENST00000409254 MAGEB10Q96LZ2 347 aaPredicted RBP12.62□□□□□ -0.39
LIMS2-203ENST00000409254 FAM111AQ96PZ2 611 aa12.62□□□□□ -0.39
LIMS2-203ENST00000409254 PKP4Q99569 1192 aa12.62□□□□□ -0.39
LIMS2-203ENST00000409254 MIPEPQ99797 713 aa12.62□□□□□ -0.39
LIMS2-203ENST00000409254 EGFL8Q99944 293 aa12.62□□□□□ -0.39
LIMS2-203ENST00000409254 ERVK-6Q9BXR3 956 aa12.62□□□□□ -0.39
LIMS2-203ENST00000409254 CHRNA10Q9GZZ6 450 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms