RNA–Protein interactions for RNA: ENST00000409020.5

NIF3L1-202, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-202ENST00000409020 NOTOA8MTQ0 251 aa9.45□□□□□ -0.9
NIF3L1-202ENST00000409020 GPR89AB7ZAQ6 455 aa9.45□□□□□ -0.9
NIF3L1-202ENST00000409020 KIR2DS3K7RE56 304 aa9.45□□□□□ -0.9
NIF3L1-202ENST00000409020 PDE5AO76074 875 aa9.45□□□□□ -0.9
NIF3L1-202ENST00000409020 TJP3O95049 919 aa9.45□□□□□ -0.9
NIF3L1-202ENST00000409020 GPR89BP0CG08 455 aa9.45□□□□□ -0.9
NIF3L1-202ENST00000409020 NR1D1P20393 614 aa9.45□□□□□ -0.9
NIF3L1-202ENST00000409020 PBLDP30039 288 aaPredicted RBP9.45□□□□□ -0.9
NIF3L1-202ENST00000409020 LEPRP48357 1165 aaKnown RBP9.45□□□□□ -0.9
NIF3L1-202ENST00000409020 CDKN1CP49918 316 aaPredicted RBP9.45□□□□□ -0.9
NIF3L1-202ENST00000409020 CLCNKAP51800 687 aa9.45□□□□□ -0.9
NIF3L1-202ENST00000409020 XIAPP98170 497 aa9.45□□□□□ -0.9
NIF3L1-202ENST00000409020 RELAQ04206 551 aa9.45□□□□□ -0.9
NIF3L1-202ENST00000409020 CKAP4Q07065 602 aaKnown RBP9.45□□□□□ -0.9
NIF3L1-202ENST00000409020 GPR18Q14330 331 aa9.45□□□□□ -0.9
NIF3L1-202ENST00000409020 NFE2L1Q14494 772 aa9.45□□□□□ -0.9
NIF3L1-202ENST00000409020 KIR2DS5Q14953 304 aa9.45□□□□□ -0.9
NIF3L1-202ENST00000409020 LONRF1Q17RB8 773 aa9.45□□□□□ -0.9
NIF3L1-202ENST00000409020 EMBQ6PCB8 327 aa9.45□□□□□ -0.9
NIF3L1-202ENST00000409020 WDR74Q6RFH5 385 aaPredicted RBP9.45□□□□□ -0.9
NIF3L1-202ENST00000409020 PRUNE1Q86TP1 453 aa9.45□□□□□ -0.9
NIF3L1-202ENST00000409020 ZNF843Q8N446 348 aa9.45□□□□□ -0.9
NIF3L1-202ENST00000409020 LILRA3Q8N6C8 439 aaPredicted RBP9.45□□□□□ -0.9
NIF3L1-202ENST00000409020 LSMEM1Q8N8F7 131 aa9.45□□□□□ -0.9
NIF3L1-202ENST00000409020 ANKS4BQ8N8V4 417 aa9.45□□□□□ -0.9
NIF3L1-202ENST00000409020 AGBL5Q8NDL9 886 aa9.45□□□□□ -0.9
NIF3L1-202ENST00000409020 DDHD1Q8NEL9 900 aa9.45□□□□□ -0.9
NIF3L1-202ENST00000409020 ATG4AQ8WYN0 398 aa9.45□□□□□ -0.9
NIF3L1-202ENST00000409020 PEX13Q92968 403 aa9.45□□□□□ -0.9
NIF3L1-202ENST00000409020 SGF29Q96ES7 293 aa9.45□□□□□ -0.9
NIF3L1-202ENST00000409020 HAUS8Q9BT25 410 aa9.45□□□□□ -0.9
NIF3L1-202ENST00000409020 FAM8A1Q9UBU6 413 aa9.45□□□□□ -0.9
NIF3L1-202ENST00000409020 TBK1Q9UHD2 729 aa9.45□□□□□ -0.9
NIF3L1-202ENST00000409020 LNPEPQ9UIQ6 1025 aa9.45□□□□□ -0.9
NIF3L1-202ENST00000409020 AMFRQ9UKV5 643 aa9.45□□□□□ -0.9
NIF3L1-202ENST00000409020 CFAP20Q9Y6A4 193 aaKnown RBP9.45□□□□□ -0.9
NIF3L1-202ENST00000409020 SMIM31A0A1B0GVY4 71 aa9.44□□□□□ -0.9
NIF3L1-202ENST00000409020 E9PBE3 544 aa9.44□□□□□ -0.9
NIF3L1-202ENST00000409020 ERVH48-1M5A8F1 160 aa9.44□□□□□ -0.9
NIF3L1-202ENST00000409020 STX7O15400 261 aaKnown RBP9.44□□□□□ -0.9
NIF3L1-202ENST00000409020 POP7O75817 140 aaKnown RBP9.44□□□□□ -0.9
NIF3L1-202ENST00000409020 ANXA9O76027 345 aa9.44□□□□□ -0.9
NIF3L1-202ENST00000409020 TPH1P17752 444 aa9.44□□□□□ -0.9
NIF3L1-202ENST00000409020 XRCC1P18887 633 aaPredicted RBP9.44□□□□□ -0.9
NIF3L1-202ENST00000409020 CD53P19397 219 aa9.44□□□□□ -0.9
NIF3L1-202ENST00000409020 M6PRP20645 277 aa9.44□□□□□ -0.9
NIF3L1-202ENST00000409020 IL32P24001 234 aa9.44□□□□□ -0.9
NIF3L1-202ENST00000409020 PSMA3P25788 255 aa9.44□□□□□ -0.9
NIF3L1-202ENST00000409020 ZNF140P52738 457 aaPredicted RBP9.44□□□□□ -0.9
NIF3L1-202ENST00000409020 GEMP55040 296 aa9.44□□□□□ -0.9
NIF3L1-202ENST00000409020 TRA2AQ13595 282 aaKnown RBP eCLIP9.44□□□□□ -0.9
NIF3L1-202ENST00000409020 TTMPQ5BVD1 217 aa9.44□□□□□ -0.9
NIF3L1-202ENST00000409020 FNBP1LQ5T0N5 605 aa9.44□□□□□ -0.9
NIF3L1-202ENST00000409020 ITPRIPL1Q6GPH6 555 aa9.44□□□□□ -0.9
NIF3L1-202ENST00000409020 TMEM220Q6QAJ8 160 aa9.44□□□□□ -0.9
NIF3L1-202ENST00000409020 ABRAXAS1Q6UWZ7 409 aa9.44□□□□□ -0.9
NIF3L1-202ENST00000409020 TMEM26Q6ZUK4 368 aa9.44□□□□□ -0.9
NIF3L1-202ENST00000409020 SLC51BQ86UW2 128 aa9.44□□□□□ -0.9
NIF3L1-202ENST00000409020 CAND1Q86VP6 1230 aaKnown RBP9.44□□□□□ -0.9
NIF3L1-202ENST00000409020 TMEM151BQ8IW70 566 aa9.44□□□□□ -0.9
NIF3L1-202ENST00000409020 ZNF398Q8TD17 642 aa9.44□□□□□ -0.9
NIF3L1-202ENST00000409020 DNAJC9Q8WXX5 260 aa9.44□□□□□ -0.9
NIF3L1-202ENST00000409020 HES6Q96HZ4 224 aa9.44□□□□□ -0.9
NIF3L1-202ENST00000409020 TGM7Q96PF1 710 aa9.44□□□□□ -0.9
NIF3L1-202ENST00000409020 TAAR9Q96RI9 348 aa9.44□□□□□ -0.9
NIF3L1-202ENST00000409020 NRTNQ99748 197 aa9.44□□□□□ -0.9
NIF3L1-202ENST00000409020 TBL1YQ9BQ87 522 aa9.44□□□□□ -0.9
NIF3L1-202ENST00000409020 TMEM121Q9BTD3 319 aa9.44□□□□□ -0.9
NIF3L1-202ENST00000409020 SLC39A1Q9NY26 324 aa9.44□□□□□ -0.9
NIF3L1-202ENST00000409020 HACD3Q9P035 362 aa9.44□□□□□ -0.9
NIF3L1-202ENST00000409020 PKP3Q9Y446 797 aa9.44□□□□□ -0.9
NIF3L1-202ENST00000409020 CCDC78A2IDD5 438 aa9.43□□□□□ -0.9
NIF3L1-202ENST00000409020 LILRA5A6NI73 299 aa9.43□□□□□ -0.9
NIF3L1-202ENST00000409020 EIF4E1BA6NMX2 242 aaKnown RBP9.43□□□□□ -0.9
NIF3L1-202ENST00000409020 TMEM114B3SHH9 223 aa9.43□□□□□ -0.9
NIF3L1-202ENST00000409020 STMND1H3BQB6 276 aa9.43□□□□□ -0.9
NIF3L1-202ENST00000409020 CDK2AP1O14519 115 aa9.43□□□□□ -0.9
NIF3L1-202ENST00000409020 CAPN5O15484 640 aaPredicted RBP9.43□□□□□ -0.9
NIF3L1-202ENST00000409020 ZW10O43264 779 aa9.43□□□□□ -0.9
NIF3L1-202ENST00000409020 LDB2O43679 373 aa9.43□□□□□ -0.9
NIF3L1-202ENST00000409020 SRP72O76094 671 aaKnown RBP9.43□□□□□ -0.9
NIF3L1-202ENST00000409020 UBXN7O94888 489 aa9.43□□□□□ -0.9
NIF3L1-202ENST00000409020 FKBP9O95302 570 aa9.43□□□□□ -0.9
NIF3L1-202ENST00000409020 VIPP01282 170 aa9.43□□□□□ -0.9
NIF3L1-202ENST00000409020 LPOP22079 712 aaPredicted RBP9.43□□□□□ -0.9
NIF3L1-202ENST00000409020 TNFRSF8P28908 595 aa9.43□□□□□ -0.9
NIF3L1-202ENST00000409020 AKT1P31749 480 aa9.43□□□□□ -0.9
NIF3L1-202ENST00000409020 SEPHS1P49903 392 aa9.43□□□□□ -0.9
NIF3L1-202ENST00000409020 BLVRAP53004 296 aa9.43□□□□□ -0.9
NIF3L1-202ENST00000409020 EPHA4P54764 986 aa9.43□□□□□ -0.9
NIF3L1-202ENST00000409020 SH3BP2P78314 561 aa9.43□□□□□ -0.9
NIF3L1-202ENST00000409020 GTF2H3Q13889 308 aa9.43□□□□□ -0.9
NIF3L1-202ENST00000409020 TAF1AQ15573 450 aaPredicted RBP9.43□□□□□ -0.9
NIF3L1-202ENST00000409020 RPE65Q16518 533 aa9.43□□□□□ -0.9
NIF3L1-202ENST00000409020 SPRED3Q2MJR0 410 aa9.43□□□□□ -0.9
NIF3L1-202ENST00000409020 LIN52Q52LA3 116 aa9.43□□□□□ -0.9
NIF3L1-202ENST00000409020 TAF1BQ53T94 588 aaPredicted RBP9.43□□□□□ -0.9
NIF3L1-202ENST00000409020 MANEAQ5SRI9 462 aa9.43□□□□□ -0.9
NIF3L1-202ENST00000409020 LDLRAP1Q5SW96 308 aa9.43□□□□□ -0.9
NIF3L1-202ENST00000409020 KCTD11Q693B1 232 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms