RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 AARDQ4LEZ3 155 aa4.65□□□□□ -1.67
HMGB1P13-201ENST00000406019 TDRD12Q587J7 1177 aaKnown RBP4.65□□□□□ -1.67
HMGB1P13-201ENST00000406019 CASC4Q6P4E1 433 aa4.65□□□□□ -1.67
HMGB1P13-201ENST00000406019 CCNI2Q6ZMN8 369 aaPredicted RBP4.65□□□□□ -1.67
HMGB1P13-201ENST00000406019 ZNF704Q6ZNC4 412 aaPredicted RBP4.65□□□□□ -1.67
HMGB1P13-201ENST00000406019 NRARPQ7Z6K4 114 aa4.65□□□□□ -1.67
HMGB1P13-201ENST00000406019 PEX5LQ8IYB4 626 aa4.65□□□□□ -1.67
HMGB1P13-201ENST00000406019 TEX9Q8N6V9 391 aa4.65□□□□□ -1.67
HMGB1P13-201ENST00000406019 BMPERQ8N8U9 685 aa4.65□□□□□ -1.67
HMGB1P13-201ENST00000406019 OR14A16Q8NHC5 309 aa4.65□□□□□ -1.67
HMGB1P13-201ENST00000406019 VANGL1Q8TAA9 524 aaPredicted RBP4.65□□□□□ -1.67
HMGB1P13-201ENST00000406019 DAZLQ92904 295 aaKnown RBP4.65□□□□□ -1.67
HMGB1P13-201ENST00000406019 RAD9AQ99638 391 aa4.65□□□□□ -1.67
HMGB1P13-201ENST00000406019 SPXQ9BT56 116 aa4.65□□□□□ -1.67
HMGB1P13-201ENST00000406019 TRIM7Q9C029 511 aa4.65□□□□□ -1.67
HMGB1P13-201ENST00000406019 XPO4Q9C0E2 1151 aaKnown RBP4.65□□□□□ -1.67
HMGB1P13-201ENST00000406019 SERINC1Q9NRX5 453 aa4.65□□□□□ -1.67
HMGB1P13-201ENST00000406019 MIOSQ9NXC5 875 aa4.65□□□□□ -1.67
HMGB1P13-201ENST00000406019 EPS15L1Q9UBC2 864 aa4.65□□□□□ -1.67
HMGB1P13-201ENST00000406019 IL19Q9UHD0 177 aa4.65□□□□□ -1.67
HMGB1P13-201ENST00000406019 FBXL5Q9UKA1 691 aa4.65□□□□□ -1.67
HMGB1P13-201ENST00000406019 AMDHD2Q9Y303 409 aa4.65□□□□□ -1.67
HMGB1P13-201ENST00000406019 SNX9Q9Y5X1 595 aa4.65□□□□□ -1.67
HMGB1P13-201ENST00000406019 ACEP12821 1306 aa4.65□□□□□ -1.67
HMGB1P13-201ENST00000406019 TEX13DA0A0J9YY54 714 aaPredicted RBP4.64□□□□□ -1.67
HMGB1P13-201ENST00000406019 SRRM3A6NNA2 597 aaPredicted RBP4.64□□□□□ -1.67
HMGB1P13-201ENST00000406019 C15orf62A8K5M9 175 aa4.64□□□□□ -1.67
HMGB1P13-201ENST00000406019 PRR32B1ATL7 298 aa4.64□□□□□ -1.67
HMGB1P13-201ENST00000406019 CAPN9O14815 690 aa4.64□□□□□ -1.67
HMGB1P13-201ENST00000406019 PPIP5K2O43314 1243 aa4.64□□□□□ -1.67
HMGB1P13-201ENST00000406019 SERPINI2O75830 405 aa4.64□□□□□ -1.67
HMGB1P13-201ENST00000406019 BCAS2O75934 225 aaPredicted RBP4.64□□□□□ -1.67
HMGB1P13-201ENST00000406019 BMP10O95393 424 aa4.64□□□□□ -1.67
HMGB1P13-201ENST00000406019 GLUD1P00367 558 aa4.64□□□□□ -1.67
HMGB1P13-201ENST00000406019 GAP43P17677 238 aa4.64□□□□□ -1.67
HMGB1P13-201ENST00000406019 GM2AP17900 193 aa4.64□□□□□ -1.67
HMGB1P13-201ENST00000406019 SLC6A6P31641 620 aa4.64□□□□□ -1.67
HMGB1P13-201ENST00000406019 GLUD2P49448 558 aa4.64□□□□□ -1.67
HMGB1P13-201ENST00000406019 NT5C2P49902 561 aa4.64□□□□□ -1.67
HMGB1P13-201ENST00000406019 MTCP1P56278 107 aa4.64□□□□□ -1.67
HMGB1P13-201ENST00000406019 NPTX1Q15818 432 aa4.64□□□□□ -1.67
HMGB1P13-201ENST00000406019 IQCCQ4KMZ1 466 aa4.64□□□□□ -1.67
HMGB1P13-201ENST00000406019 FAM122CQ6P4D5 195 aa4.64□□□□□ -1.67
HMGB1P13-201ENST00000406019 KLC3Q6P597 504 aa4.64□□□□□ -1.67
HMGB1P13-201ENST00000406019 CYB5D1Q6P9G0 228 aa4.64□□□□□ -1.67
HMGB1P13-201ENST00000406019 CASC1Q6TDU7 716 aa4.64□□□□□ -1.67
HMGB1P13-201ENST00000406019 C18orf65Q6ZTR6 163 aa4.64□□□□□ -1.67
HMGB1P13-201ENST00000406019 TMPRSS12Q86WS5 348 aa4.64□□□□□ -1.67
HMGB1P13-201ENST00000406019 ERC1Q8IUD2 1116 aa4.64□□□□□ -1.67
HMGB1P13-201ENST00000406019 EGFL6Q8IUX8 553 aa4.64□□□□□ -1.67
HMGB1P13-201ENST00000406019 FOXP4Q8IVH2 680 aaPredicted RBP4.64□□□□□ -1.67
HMGB1P13-201ENST00000406019 FAM114A1Q8IWE2 563 aa4.64□□□□□ -1.67
HMGB1P13-201ENST00000406019 PGBD5Q8N414 524 aa4.64□□□□□ -1.67
HMGB1P13-201ENST00000406019 GBGT1Q8N5D6 347 aa4.64□□□□□ -1.67
HMGB1P13-201ENST00000406019 CPSF7Q8N684 471 aaKnown RBP4.64□□□□□ -1.67
HMGB1P13-201ENST00000406019 LPCAT1Q8NF37 534 aa4.64□□□□□ -1.67
HMGB1P13-201ENST00000406019 NUDCD2Q8WVJ2 157 aa4.64□□□□□ -1.67
HMGB1P13-201ENST00000406019 SEMA4DQ92854 862 aa4.64□□□□□ -1.67
HMGB1P13-201ENST00000406019 PHF21AQ96BD5 680 aa4.64□□□□□ -1.67
HMGB1P13-201ENST00000406019 MED30Q96HR3 178 aa4.64□□□□□ -1.67
HMGB1P13-201ENST00000406019 KLHL5Q96PQ7 755 aa4.64□□□□□ -1.67
HMGB1P13-201ENST00000406019 MYADMQ96S97 322 aa4.64□□□□□ -1.67
HMGB1P13-201ENST00000406019 LRMDAQ9H2I8 198 aa4.64□□□□□ -1.67
HMGB1P13-201ENST00000406019 SRD5A3Q9H8P0 318 aa4.64□□□□□ -1.67
HMGB1P13-201ENST00000406019 ACKR4Q9NPB9 350 aa4.64□□□□□ -1.67
HMGB1P13-201ENST00000406019 TCP11L1Q9NUJ3 509 aa4.64□□□□□ -1.67
HMGB1P13-201ENST00000406019 ANO10Q9NW15 660 aa4.64□□□□□ -1.67
HMGB1P13-201ENST00000406019 B3GAT1Q9P2W7 334 aa4.64□□□□□ -1.67
HMGB1P13-201ENST00000406019 TRPC4Q9UBN4 977 aa4.64□□□□□ -1.67
HMGB1P13-201ENST00000406019 MTUS1Q9ULD2 1270 aa4.64□□□□□ -1.67
HMGB1P13-201ENST00000406019 STX8Q9UNK0 236 aa4.64□□□□□ -1.67
HMGB1P13-201ENST00000406019 PDS5AQ29RF7 1337 aaKnown RBP4.64□□□□□ -1.67
HMGB1P13-201ENST00000406019 IGLV5-52A0A0A0MRZ9 124 aa4.63□□□□□ -1.67
HMGB1P13-201ENST00000406019 ZCWPW2A0A1B0GU75 182 aa4.63□□□□□ -1.67
HMGB1P13-201ENST00000406019 HYKKA2RU49 373 aa4.63□□□□□ -1.67
HMGB1P13-201ENST00000406019 PRR23D1E9PI22 279 aaPredicted RBP4.63□□□□□ -1.67
HMGB1P13-201ENST00000406019 ATP6AP2O75787 350 aa4.63□□□□□ -1.67
HMGB1P13-201ENST00000406019 LUC7L3O95232 432 aaKnown RBP4.63□□□□□ -1.67
HMGB1P13-201ENST00000406019 CLDN14O95500 239 aa4.63□□□□□ -1.67
HMGB1P13-201ENST00000406019 PLGP00747 810 aaPredicted RBP4.63□□□□□ -1.67
HMGB1P13-201ENST00000406019 PRR23D2P0DMB1 279 aaPredicted RBP4.63□□□□□ -1.67
HMGB1P13-201ENST00000406019 FGF3P11487 239 aaPredicted RBP4.63□□□□□ -1.67
HMGB1P13-201ENST00000406019 PCP11498 1178 aaKnown RBP4.63□□□□□ -1.67
HMGB1P13-201ENST00000406019 MYOD1P15172 320 aa4.63□□□□□ -1.67
HMGB1P13-201ENST00000406019 TYMPP19971 482 aa4.63□□□□□ -1.67
HMGB1P13-201ENST00000406019 CCND3P30281 292 aaPredicted RBP4.63□□□□□ -1.67
HMGB1P13-201ENST00000406019 HSD17B3P37058 310 aa4.63□□□□□ -1.67
HMGB1P13-201ENST00000406019 CDX1P47902 265 aaPredicted RBP4.63□□□□□ -1.67
HMGB1P13-201ENST00000406019 MMP15P51511 669 aa4.63□□□□□ -1.67
HMGB1P13-201ENST00000406019 GSDMDP57764 484 aa4.63□□□□□ -1.67
HMGB1P13-201ENST00000406019 PRKAA1Q13131 559 aa4.63□□□□□ -1.67
HMGB1P13-201ENST00000406019 ZNF234Q14588 700 aa4.63□□□□□ -1.67
HMGB1P13-201ENST00000406019 LACTB2Q53H82 288 aaPredicted RBP4.63□□□□□ -1.67
HMGB1P13-201ENST00000406019 DNAJC21Q5F1R6 531 aaKnown RBP4.63□□□□□ -1.67
HMGB1P13-201ENST00000406019 SUSD4Q5VX71 490 aa4.63□□□□□ -1.67
HMGB1P13-201ENST00000406019 TRNP1Q6NT89 227 aa4.63□□□□□ -1.67
HMGB1P13-201ENST00000406019 PODNL1Q6PEZ8 512 aa4.63□□□□□ -1.67
HMGB1P13-201ENST00000406019 CATSPER4Q7RTX7 472 aa4.63□□□□□ -1.67
HMGB1P13-201ENST00000406019 COMMD2Q86X83 199 aa4.63□□□□□ -1.67
HMGB1P13-201ENST00000406019 RNF113BQ8IZP6 322 aaKnown RBP4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms