RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 SLC24A4Q8NFF2 622 aa3.62□□□□□ -1.83
HMGB1P17-201ENST00000403495 GRHL3Q8TE85 626 aa3.62□□□□□ -1.83
HMGB1P17-201ENST00000403495 CD101Q93033 1021 aa3.62□□□□□ -1.83
HMGB1P17-201ENST00000403495 FAM162AQ96A26 154 aa3.62□□□□□ -1.83
HMGB1P17-201ENST00000403495 DHX58Q96C10 678 aa3.62□□□□□ -1.83
HMGB1P17-201ENST00000403495 FAM20AQ96MK3 541 aa3.62□□□□□ -1.83
HMGB1P17-201ENST00000403495 PKP4Q99569 1192 aa3.62□□□□□ -1.83
HMGB1P17-201ENST00000403495 RTP3Q9BQQ7 232 aa3.62□□□□□ -1.83
HMGB1P17-201ENST00000403495 MMADHCQ9H3L0 296 aaPredicted RBP3.62□□□□□ -1.83
HMGB1P17-201ENST00000403495 COPS7BQ9H9Q2 264 aaPredicted RBP3.62□□□□□ -1.83
HMGB1P17-201ENST00000403495 CD93Q9NPY3 652 aa3.62□□□□□ -1.83
HMGB1P17-201ENST00000403495 DONSONQ9NYP3 566 aa3.62□□□□□ -1.83
HMGB1P17-201ENST00000403495 SEPT10Q9P0V9 454 aa3.62□□□□□ -1.83
HMGB1P17-201ENST00000403495 ARMCX3Q9UH62 379 aaPredicted RBP3.62□□□□□ -1.83
HMGB1P17-201ENST00000403495 HEG1Q9ULI3 1381 aa3.62□□□□□ -1.83
HMGB1P17-201ENST00000403495 A0A1W2PPI3 338 aa3.61□□□□□ -1.83
HMGB1P17-201ENST00000403495 DUXAA6NLW8 204 aa3.61□□□□□ -1.83
HMGB1P17-201ENST00000403495 PLOD2O00469 737 aa3.61□□□□□ -1.83
HMGB1P17-201ENST00000403495 SELENOFO60613 162 aa3.61□□□□□ -1.83
HMGB1P17-201ENST00000403495 PRAF2O60831 178 aa3.61□□□□□ -1.83
HMGB1P17-201ENST00000403495 NME6O75414 186 aaPredicted RBP3.61□□□□□ -1.83
HMGB1P17-201ENST00000403495 MOCS3O95396 460 aa3.61□□□□□ -1.83
HMGB1P17-201ENST00000403495 CETPP11597 493 aa3.61□□□□□ -1.83
HMGB1P17-201ENST00000403495 MTCP1P56278 107 aa3.61□□□□□ -1.83
HMGB1P17-201ENST00000403495 PPP2R5CQ13362 524 aa3.61□□□□□ -1.83
HMGB1P17-201ENST00000403495 KIR2DS3Q14952 304 aa3.61□□□□□ -1.83
HMGB1P17-201ENST00000403495 NONOQ15233 471 aaKnown RBP eCLIP3.61□□□□□ -1.83
HMGB1P17-201ENST00000403495 TAZQ16635 292 aa3.61□□□□□ -1.83
HMGB1P17-201ENST00000403495 ZNF674Q2M3X9 581 aa3.61□□□□□ -1.83
HMGB1P17-201ENST00000403495 ITPRIPL2Q3MIP1 535 aa3.61□□□□□ -1.83
HMGB1P17-201ENST00000403495 XKR3Q5GH77 459 aa3.61□□□□□ -1.83
HMGB1P17-201ENST00000403495 LRRC73Q5JTD7 316 aa3.61□□□□□ -1.83
HMGB1P17-201ENST00000403495 SHEQ5VZ18 495 aa3.61□□□□□ -1.83
HMGB1P17-201ENST00000403495 C11orf63Q6NUN7 778 aa3.61□□□□□ -1.83
HMGB1P17-201ENST00000403495 HOOK3Q86VS8 718 aa3.61□□□□□ -1.83
HMGB1P17-201ENST00000403495 ZDHHC17Q8IUH5 632 aa3.61□□□□□ -1.83
HMGB1P17-201ENST00000403495 GPALPP1Q8IXQ4 340 aa3.61□□□□□ -1.83
HMGB1P17-201ENST00000403495 MAML2Q8IZL2 1156 aaPredicted RBP3.61□□□□□ -1.83
HMGB1P17-201ENST00000403495 MAB21L3Q8N8X9 362 aa3.61□□□□□ -1.83
HMGB1P17-201ENST00000403495 NHLRC2Q8NBF2 726 aa3.61□□□□□ -1.83
HMGB1P17-201ENST00000403495 OR2T12Q8NG77 320 aa3.61□□□□□ -1.83
HMGB1P17-201ENST00000403495 PROX1Q92786 737 aa3.61□□□□□ -1.83
HMGB1P17-201ENST00000403495 ZNF354BQ96LW1 612 aa3.61□□□□□ -1.83
HMGB1P17-201ENST00000403495 INPP5KQ9BT40 448 aa3.61□□□□□ -1.83
HMGB1P17-201ENST00000403495 TFB2MQ9H5Q4 396 aaKnown RBP3.61□□□□□ -1.83
HMGB1P17-201ENST00000403495 MINDY3Q9H8M7 445 aa3.61□□□□□ -1.83
HMGB1P17-201ENST00000403495 TCF7L2Q9NQB0 619 aa3.61□□□□□ -1.83
HMGB1P17-201ENST00000403495 FRMD4AQ9P2Q2 1039 aaPredicted RBP3.61□□□□□ -1.83
HMGB1P17-201ENST00000403495 CACNG4Q9UBN1 327 aa3.61□□□□□ -1.83
HMGB1P17-201ENST00000403495 SNX7Q9UNH6 387 aa3.61□□□□□ -1.83
HMGB1P17-201ENST00000403495 NME7Q9Y5B8 376 aa3.61□□□□□ -1.83
HMGB1P17-201ENST00000403495 A0A087WV48 116 aa3.6□□□□□ -1.83
HMGB1P17-201ENST00000403495 PPIP5K2O43314 1243 aa3.6□□□□□ -1.83
HMGB1P17-201ENST00000403495 ATP6AP2O75787 350 aa3.6□□□□□ -1.83
HMGB1P17-201ENST00000403495 DDHD2O94830 711 aa3.6□□□□□ -1.83
HMGB1P17-201ENST00000403495 VIMP08670 466 aaKnown RBP3.6□□□□□ -1.83
HMGB1P17-201ENST00000403495 FGF3P11487 239 aaPredicted RBP3.6□□□□□ -1.83
HMGB1P17-201ENST00000403495 ZNF23P17027 643 aa3.6□□□□□ -1.83
HMGB1P17-201ENST00000403495 TCEA1P23193 301 aaKnown RBP3.6□□□□□ -1.83
HMGB1P17-201ENST00000403495 MARK3P27448 753 aa3.6□□□□□ -1.83
HMGB1P17-201ENST00000403495 ALDH1B1P30837 517 aa3.6□□□□□ -1.83
HMGB1P17-201ENST00000403495 PITX1P78337 314 aaPredicted RBP3.6□□□□□ -1.83
HMGB1P17-201ENST00000403495 RASGEF1BQ0VAM2 473 aa3.6□□□□□ -1.83
HMGB1P17-201ENST00000403495 TAF10Q12962 218 aa3.6□□□□□ -1.83
HMGB1P17-201ENST00000403495 TNK1Q13470 666 aa3.6□□□□□ -1.83
HMGB1P17-201ENST00000403495 SQLEQ14534 574 aa3.6□□□□□ -1.83
HMGB1P17-201ENST00000403495 SFMBT2Q5VUG0 894 aa3.6□□□□□ -1.83
HMGB1P17-201ENST00000403495 CYB5D1Q6P9G0 228 aa3.6□□□□□ -1.83
HMGB1P17-201ENST00000403495 SPSB3Q6PJ21 355 aa3.6□□□□□ -1.83
HMGB1P17-201ENST00000403495 ENPP7Q6UWV6 458 aa3.6□□□□□ -1.83
HMGB1P17-201ENST00000403495 LINGO4Q6UY18 593 aa3.6□□□□□ -1.83
HMGB1P17-201ENST00000403495 FOXL2NBQ6ZUU3 175 aa3.6□□□□□ -1.83
HMGB1P17-201ENST00000403495 C9orf139Q6ZV77 190 aa3.6□□□□□ -1.83
HMGB1P17-201ENST00000403495 PLD3Q8IV08 490 aa3.6□□□□□ -1.83
HMGB1P17-201ENST00000403495 DCP1BQ8IZD4 617 aaKnown RBP3.6□□□□□ -1.83
HMGB1P17-201ENST00000403495 SYCP3Q8IZU3 236 aa3.6□□□□□ -1.83
HMGB1P17-201ENST00000403495 EID3Q8N140 333 aa3.6□□□□□ -1.83
HMGB1P17-201ENST00000403495 NAGSQ8N159 534 aa3.6□□□□□ -1.83
HMGB1P17-201ENST00000403495 NUP93Q8N1F7 819 aa3.6□□□□□ -1.83
HMGB1P17-201ENST00000403495 ZNF383Q8NA42 475 aa3.6□□□□□ -1.83
HMGB1P17-201ENST00000403495 FIBINQ8TAL6 211 aa3.6□□□□□ -1.83
HMGB1P17-201ENST00000403495 CCDC107Q8WV48 283 aa3.6□□□□□ -1.83
HMGB1P17-201ENST00000403495 SLC47A1Q96FL8 570 aa3.6□□□□□ -1.83
HMGB1P17-201ENST00000403495 ST6GAL2Q96JF0 529 aa3.6□□□□□ -1.83
HMGB1P17-201ENST00000403495 FAM71F1Q96KD3 344 aaPredicted RBP3.6□□□□□ -1.83
HMGB1P17-201ENST00000403495 MARK4Q96L34 752 aa3.6□□□□□ -1.83
HMGB1P17-201ENST00000403495 SGK494Q96LW2 274 aa3.6□□□□□ -1.83
HMGB1P17-201ENST00000403495 DUX5Q96PT3 197 aa3.6□□□□□ -1.83
HMGB1P17-201ENST00000403495 EGFL8Q99944 293 aa3.6□□□□□ -1.83
HMGB1P17-201ENST00000403495 URM1Q9BTM9 101 aaKnown RBP3.6□□□□□ -1.83
HMGB1P17-201ENST00000403495 LRRC1Q9BTT6 524 aa3.6□□□□□ -1.83
HMGB1P17-201ENST00000403495 PRRG4Q9BZD6 226 aa3.6□□□□□ -1.83
HMGB1P17-201ENST00000403495 RSPH9Q9H1X1 276 aaPredicted RBP3.6□□□□□ -1.83
HMGB1P17-201ENST00000403495 Q9H8V8 135 aa3.6□□□□□ -1.83
HMGB1P17-201ENST00000403495 PHPT1Q9NRX4 125 aaPredicted RBP3.6□□□□□ -1.83
HMGB1P17-201ENST00000403495 ZNF701Q9NV72 531 aaPredicted RBP3.6□□□□□ -1.83
HMGB1P17-201ENST00000403495 SLC7A7Q9UM01 511 aa3.6□□□□□ -1.83
HMGB1P17-201ENST00000403495 IGKV2D-30A0A075B6S6 120 aa3.59□□□□□ -1.83
HMGB1P17-201ENST00000403495 A0A1W2PPW3 197 aa3.59□□□□□ -1.83
HMGB1P17-201ENST00000403495 A0A1W2PS18 150 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms