RNA–Protein interactions for RNA: ENST00000403408.2

SPTLC1P3-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 3, humanhuman

BASIC

Gene SPTLC1P3, Length 259 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P3-201ENST00000403408 RPTNQ6XPR3 784 aa11.38□□□□□ -0.59
SPTLC1P3-201ENST00000403408 LAPTM4BQ86VI4 370 aa11.38□□□□□ -0.59
SPTLC1P3-201ENST00000403408 VSIG1Q86XK7 387 aa11.38□□□□□ -0.59
SPTLC1P3-201ENST00000403408 PIANPQ8IYJ0 282 aa11.38□□□□□ -0.59
SPTLC1P3-201ENST00000403408 PRSS58Q8IYP2 241 aa11.38□□□□□ -0.59
SPTLC1P3-201ENST00000403408 SIRT6Q8N6T7 355 aa11.38□□□□□ -0.59
SPTLC1P3-201ENST00000403408 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.38□□□□□ -0.59
SPTLC1P3-201ENST00000403408 HAS2Q92819 552 aa11.38□□□□□ -0.59
SPTLC1P3-201ENST00000403408 ZNF285Q96NJ3 590 aa11.38□□□□□ -0.59
SPTLC1P3-201ENST00000403408 COPS8Q99627 209 aa11.38□□□□□ -0.59
SPTLC1P3-201ENST00000403408 TMEM121Q9BTD3 319 aa11.38□□□□□ -0.59
SPTLC1P3-201ENST00000403408 ABI3Q9P2A4 366 aa11.38□□□□□ -0.59
SPTLC1P3-201ENST00000403408 PTGFRNQ9P2B2 879 aa11.38□□□□□ -0.59
SPTLC1P3-201ENST00000403408 STOX2Q9P2F5 926 aaPredicted RBP11.38□□□□□ -0.59
SPTLC1P3-201ENST00000403408 SUCOQ9UBS9 1254 aaKnown RBP11.38□□□□□ -0.59
SPTLC1P3-201ENST00000403408 CRLS1Q9UJA2 301 aa11.38□□□□□ -0.59
SPTLC1P3-201ENST00000403408 TINAGQ9UJW2 476 aa11.38□□□□□ -0.59
SPTLC1P3-201ENST00000403408 MAU2Q9Y6X3 613 aa11.38□□□□□ -0.59
SPTLC1P3-201ENST00000403408 DSCR3O14972 297 aa11.37□□□□□ -0.59
SPTLC1P3-201ENST00000403408 HPP00738 406 aa11.37□□□□□ -0.59
SPTLC1P3-201ENST00000403408 KRT1P04264 644 aa11.37□□□□□ -0.59
SPTLC1P3-201ENST00000403408 PRR35P0CG20 571 aa11.37□□□□□ -0.59
SPTLC1P3-201ENST00000403408 COX6A1P12074 109 aa11.37□□□□□ -0.59
SPTLC1P3-201ENST00000403408 SSTR2P30874 369 aa11.37□□□□□ -0.59
SPTLC1P3-201ENST00000403408 CDKN2BP42772 138 aa11.37□□□□□ -0.59
SPTLC1P3-201ENST00000403408 ARG2P78540 354 aa11.37□□□□□ -0.59
SPTLC1P3-201ENST00000403408 KLC1Q07866 573 aa11.37□□□□□ -0.59
SPTLC1P3-201ENST00000403408 MPP3Q13368 585 aa11.37□□□□□ -0.59
SPTLC1P3-201ENST00000403408 GRB7Q14451 532 aa11.37□□□□□ -0.59
SPTLC1P3-201ENST00000403408 BRD3Q15059 726 aa11.37□□□□□ -0.59
SPTLC1P3-201ENST00000403408 LCE2DQ5TA82 110 aaPredicted RBP11.37□□□□□ -0.59
SPTLC1P3-201ENST00000403408 SASS6Q6UVJ0 657 aa11.37□□□□□ -0.59
SPTLC1P3-201ENST00000403408 ARHGEF18Q6ZSZ5 1173 aa11.37□□□□□ -0.59
SPTLC1P3-201ENST00000403408 PID1Q7Z2X4 250 aa11.37□□□□□ -0.59
SPTLC1P3-201ENST00000403408 SERPINA9Q86WD7 417 aa11.37□□□□□ -0.59
SPTLC1P3-201ENST00000403408 SHISA5Q8N114 240 aa11.37□□□□□ -0.59
SPTLC1P3-201ENST00000403408 C2orf73Q8N5S3 287 aaPredicted RBP11.37□□□□□ -0.59
SPTLC1P3-201ENST00000403408 TFB1MQ8WVM0 346 aaKnown RBP11.37□□□□□ -0.59
SPTLC1P3-201ENST00000403408 SYN2Q92777 582 aaPredicted RBP11.37□□□□□ -0.59
SPTLC1P3-201ENST00000403408 DCUN1D1Q96GG9 259 aa11.37□□□□□ -0.59
SPTLC1P3-201ENST00000403408 SYNPO2LQ9H987 977 aa11.37□□□□□ -0.59
SPTLC1P3-201ENST00000403408 ENAMQ9NRM1 1142 aa11.37□□□□□ -0.59
SPTLC1P3-201ENST00000403408 SEMA3GQ9NS98 782 aa11.37□□□□□ -0.59
SPTLC1P3-201ENST00000403408 CUTCQ9NTM9 273 aa11.37□□□□□ -0.59
SPTLC1P3-201ENST00000403408 IRAK4Q9NWZ3 460 aa11.37□□□□□ -0.59
SPTLC1P3-201ENST00000403408 ZDHHC3Q9NYG2 299 aa11.37□□□□□ -0.59
SPTLC1P3-201ENST00000403408 CHMP5Q9NZZ3 219 aa11.37□□□□□ -0.59
SPTLC1P3-201ENST00000403408 KLHL8Q9P2G9 620 aaPredicted RBP11.37□□□□□ -0.59
SPTLC1P3-201ENST00000403408 UVRAGQ9P2Y5 699 aa11.37□□□□□ -0.59
SPTLC1P3-201ENST00000403408 SEC14L3Q9UDX4 400 aa11.37□□□□□ -0.59
SPTLC1P3-201ENST00000403408 CIDEBQ9UHD4 219 aa11.37□□□□□ -0.59
SPTLC1P3-201ENST00000403408 TDRKHQ9Y2W6 561 aaKnown RBP11.37□□□□□ -0.59
SPTLC1P3-201ENST00000403408 NEU2Q9Y3R4 380 aa11.37□□□□□ -0.59
SPTLC1P3-201ENST00000403408 TRAV17A0A0B4J275 112 aa11.36□□□□□ -0.59
SPTLC1P3-201ENST00000403408 ISM1B1AKI9 464 aa11.36□□□□□ -0.59
SPTLC1P3-201ENST00000403408 CTSVO60911 334 aa11.36□□□□□ -0.59
SPTLC1P3-201ENST00000403408 WDPCPO95876 746 aa11.36□□□□□ -0.59
SPTLC1P3-201ENST00000403408 SHMT2P34897 504 aa11.36□□□□□ -0.59
SPTLC1P3-201ENST00000403408 ST13P50502 369 aaKnown RBP11.36□□□□□ -0.59
SPTLC1P3-201ENST00000403408 TLE4Q04727 773 aa11.36□□□□□ -0.59
SPTLC1P3-201ENST00000403408 TYRO3Q06418 890 aa11.36□□□□□ -0.59
SPTLC1P3-201ENST00000403408 RPA4Q13156 261 aa11.36□□□□□ -0.59
SPTLC1P3-201ENST00000403408 DBN1Q16643 649 aa11.36□□□□□ -0.59
SPTLC1P3-201ENST00000403408 ASTE1Q2TB18 679 aaPredicted RBP11.36□□□□□ -0.59
SPTLC1P3-201ENST00000403408 XKRXQ6PP77 449 aa11.36□□□□□ -0.59
SPTLC1P3-201ENST00000403408 SNX20Q7Z614 316 aa11.36□□□□□ -0.59
SPTLC1P3-201ENST00000403408 HOOK3Q86VS8 718 aa11.36□□□□□ -0.59
SPTLC1P3-201ENST00000403408 MMP21Q8N119 569 aa11.36□□□□□ -0.59
SPTLC1P3-201ENST00000403408 STT3BQ8TCJ2 826 aa11.36□□□□□ -0.59
SPTLC1P3-201ENST00000403408 CPLX3Q8WVH0 158 aa11.36□□□□□ -0.59
SPTLC1P3-201ENST00000403408 HAUS1Q96CS2 278 aa11.36□□□□□ -0.59
SPTLC1P3-201ENST00000403408 MTFMTQ96DP5 389 aaKnown RBP11.36□□□□□ -0.59
SPTLC1P3-201ENST00000403408 C14orf79Q96F83 325 aa11.36□□□□□ -0.59
SPTLC1P3-201ENST00000403408 DNAJC1Q96KC8 554 aaKnown RBP11.36□□□□□ -0.59
SPTLC1P3-201ENST00000403408 IL17FQ96PD4 163 aa11.36□□□□□ -0.59
SPTLC1P3-201ENST00000403408 TREX2Q9BQ50 279 aaPredicted RBP11.36□□□□□ -0.59
SPTLC1P3-201ENST00000403408 CRB3Q9BUF7 120 aa11.36□□□□□ -0.59
SPTLC1P3-201ENST00000403408 MAK16Q9BXY0 300 aaKnown RBP11.36□□□□□ -0.59
SPTLC1P3-201ENST00000403408 MRM3Q9HC36 420 aaKnown RBP11.36□□□□□ -0.59
SPTLC1P3-201ENST00000403408 OR6C2Q9NZP2 312 aa11.36□□□□□ -0.59
SPTLC1P3-201ENST00000403408 ASF1AQ9Y294 204 aa11.36□□□□□ -0.59
SPTLC1P3-201ENST00000403408 MRPS2Q9Y399 296 aaKnown RBP11.36□□□□□ -0.59
SPTLC1P3-201ENST00000403408 BZW2Q9Y6E2 419 aaKnown RBP11.36□□□□□ -0.59
SPTLC1P3-201ENST00000403408 DNAJC13O75165 2243 aa11.36□□□□□ -0.59
SPTLC1P3-201ENST00000403408 HEATR5BQ9P2D3 2071 aa11.36□□□□□ -0.59
SPTLC1P3-201ENST00000403408 SLC5A10A0PJK1 596 aa11.35□□□□□ -0.59
SPTLC1P3-201ENST00000403408 FITM1A5D6W6 292 aa11.35□□□□□ -0.59
SPTLC1P3-201ENST00000403408 C5orf60A6NFR6 353 aa11.35□□□□□ -0.59
SPTLC1P3-201ENST00000403408 FFAR3O14843 346 aa11.35□□□□□ -0.59
SPTLC1P3-201ENST00000403408 GPR42O15529 346 aa11.35□□□□□ -0.59
SPTLC1P3-201ENST00000403408 CST8O60676 142 aa11.35□□□□□ -0.59
SPTLC1P3-201ENST00000403408 SLC19A2O60779 497 aa11.35□□□□□ -0.59
SPTLC1P3-201ENST00000403408 ZGLP1P0C6A0 271 aa11.35□□□□□ -0.59
SPTLC1P3-201ENST00000403408 ITGAMP11215 1152 aa11.35□□□□□ -0.59
SPTLC1P3-201ENST00000403408 ZFXP17010 805 aaPredicted RBP11.35□□□□□ -0.59
SPTLC1P3-201ENST00000403408 ACRV1P26436 265 aa11.35□□□□□ -0.59
SPTLC1P3-201ENST00000403408 PKLRP30613 574 aa11.35□□□□□ -0.59
SPTLC1P3-201ENST00000403408 MC4RP32245 332 aa11.35□□□□□ -0.59
SPTLC1P3-201ENST00000403408 SNRPNP63162 240 aaKnown RBP11.35□□□□□ -0.59
SPTLC1P3-201ENST00000403408 INAQ16352 499 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms