RNA–Protein interactions for RNA: ENST00000397200.8

CAPN3-207, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-207ENST00000397200 SYTL3Q4VX76 610 aa14.53□□□□□ -0.08
CAPN3-207ENST00000397200 CMPK2Q5EBM0 449 aa14.53□□□□□ -0.08
CAPN3-207ENST00000397200 NXNQ6DKJ4 435 aa14.53□□□□□ -0.08
CAPN3-207ENST00000397200 CHST15Q7LFX5 561 aaPredicted RBP14.53□□□□□ -0.08
CAPN3-207ENST00000397200 C11orf96Q7Z7L8 435 aa14.53□□□□□ -0.08
CAPN3-207ENST00000397200 AMZ2Q86W34 360 aa14.53□□□□□ -0.08
CAPN3-207ENST00000397200 CPNE9Q8IYJ1 553 aa14.53□□□□□ -0.08
CAPN3-207ENST00000397200 DEFB107AQ8IZN7 70 aa14.53□□□□□ -0.08
CAPN3-207ENST00000397200 CEP76Q8TAP6 659 aa14.53□□□□□ -0.08
CAPN3-207ENST00000397200 HMGCLL1Q8TB92 370 aa14.53□□□□□ -0.08
CAPN3-207ENST00000397200 STMN2Q93045 179 aa14.53□□□□□ -0.08
CAPN3-207ENST00000397200 EXT2Q93063 718 aa14.53□□□□□ -0.08
CAPN3-207ENST00000397200 C19orf60Q96EN9 201 aa14.53□□□□□ -0.08
CAPN3-207ENST00000397200 LINGO1Q96FE5 620 aa14.53□□□□□ -0.08
CAPN3-207ENST00000397200 TIMM29Q9BSF4 260 aa14.53□□□□□ -0.08
CAPN3-207ENST00000397200 TM7SF3Q9NS93 570 aa14.53□□□□□ -0.08
CAPN3-207ENST00000397200 STOML1Q9UBI4 398 aa14.53□□□□□ -0.08
CAPN3-207ENST00000397200 FAM8A1Q9UBU6 413 aa14.53□□□□□ -0.08
CAPN3-207ENST00000397200 PNMA8BQ9ULN7 279 aaPredicted RBP14.53□□□□□ -0.08
CAPN3-207ENST00000397200 DGKBQ9Y6T7 804 aa14.53□□□□□ -0.08
CAPN3-207ENST00000397200 C17orf113A0A1B0GUU1 675 aa14.52□□□□□ -0.08
CAPN3-207ENST00000397200 KLHL33A6NCF5 533 aa14.52□□□□□ -0.08
CAPN3-207ENST00000397200 MGAT4DA6NG13 374 aa14.52□□□□□ -0.08
CAPN3-207ENST00000397200 LRRC14BA6NHZ5 514 aa14.52□□□□□ -0.08
CAPN3-207ENST00000397200 H0Y3Z8 333 aa14.52□□□□□ -0.08
CAPN3-207ENST00000397200 BTN3A1O00481 513 aa14.52□□□□□ -0.08
CAPN3-207ENST00000397200 SCAMP1O15126 338 aa14.52□□□□□ -0.08
CAPN3-207ENST00000397200 EPN2O95208 641 aa14.52□□□□□ -0.08
CAPN3-207ENST00000397200 ACP5P13686 325 aa14.52□□□□□ -0.08
CAPN3-207ENST00000397200 AOAHP28039 575 aa14.52□□□□□ -0.08
CAPN3-207ENST00000397200 EEF1DP29692 281 aaKnown RBP14.52□□□□□ -0.08
CAPN3-207ENST00000397200 CCR7P32248 378 aa14.52□□□□□ -0.08
CAPN3-207ENST00000397200 PI4KAP42356 2102 aa14.52□□□□□ -0.08
CAPN3-207ENST00000397200 HK3P52790 923 aa14.52□□□□□ -0.08
CAPN3-207ENST00000397200 IRX1P78414 480 aaPredicted RBP14.52□□□□□ -0.08
CAPN3-207ENST00000397200 CLCQ05315 142 aa14.52□□□□□ -0.08
CAPN3-207ENST00000397200 TBL3Q12788 808 aaKnown RBP14.52□□□□□ -0.08
CAPN3-207ENST00000397200 ANKS6Q68DC2 871 aa14.52□□□□□ -0.08
CAPN3-207ENST00000397200 TLDC1Q6P9B6 456 aa14.52□□□□□ -0.08
CAPN3-207ENST00000397200 AAGABQ6PD74 315 aa14.52□□□□□ -0.08
CAPN3-207ENST00000397200 C16orf89Q6UX73 402 aa14.52□□□□□ -0.08
CAPN3-207ENST00000397200 PHACTR4Q8IZ21 702 aa14.52□□□□□ -0.08
CAPN3-207ENST00000397200 OXR1Q8N573 874 aa14.52□□□□□ -0.08
CAPN3-207ENST00000397200 ZBTB2Q8N680 514 aa14.52□□□□□ -0.08
CAPN3-207ENST00000397200 OR2L2Q8NH16 312 aa14.52□□□□□ -0.08
CAPN3-207ENST00000397200 HM13Q8TCT9 377 aa14.52□□□□□ -0.08
CAPN3-207ENST00000397200 EEF1AKMT1Q8WVE0 214 aa14.52□□□□□ -0.08
CAPN3-207ENST00000397200 JADE3Q92613 823 aa14.52□□□□□ -0.08
CAPN3-207ENST00000397200 LATS2Q9NRM7 1088 aa14.52□□□□□ -0.08
CAPN3-207ENST00000397200 NDE1Q9NXR1 346 aa14.52□□□□□ -0.08
CAPN3-207ENST00000397200 NUDT4Q9NZJ9 180 aa14.52□□□□□ -0.08
CAPN3-207ENST00000397200 KLHL42Q9P2K6 505 aa14.52□□□□□ -0.08
CAPN3-207ENST00000397200 DNAJC15Q9Y5T4 150 aa14.52□□□□□ -0.08
CAPN3-207ENST00000397200 AZIN1O14977 448 aa14.52□□□□□ -0.09
CAPN3-207ENST00000397200 KCNJ13O60928 360 aa14.52□□□□□ -0.09
CAPN3-207ENST00000397200 FKBP6O75344 327 aa14.52□□□□□ -0.09
CAPN3-207ENST00000397200 CFIP05156 583 aa14.52□□□□□ -0.09
CAPN3-207ENST00000397200 PTDSS1P48651 473 aaKnown RBP14.52□□□□□ -0.09
CAPN3-207ENST00000397200 CDH13P55290 713 aa14.52□□□□□ -0.09
CAPN3-207ENST00000397200 SLC34A1Q06495 639 aa14.52□□□□□ -0.09
CAPN3-207ENST00000397200 LRP8Q14114 963 aa14.52□□□□□ -0.09
CAPN3-207ENST00000397200 ZNF542PQ5EBM4 170 aa14.52□□□□□ -0.09
CAPN3-207ENST00000397200 C1orf146Q5VVC0 180 aa14.52□□□□□ -0.09
CAPN3-207ENST00000397200 CLEC6AQ6EIG7 209 aa14.52□□□□□ -0.09
CAPN3-207ENST00000397200 PGAM4Q8N0Y7 254 aa14.52□□□□□ -0.09
CAPN3-207ENST00000397200 FBXW8Q8N3Y1 598 aa14.52□□□□□ -0.09
CAPN3-207ENST00000397200 KYQ8NBH2 561 aa14.52□□□□□ -0.09
CAPN3-207ENST00000397200 ASZ1Q8WWH4 475 aa14.52□□□□□ -0.09
CAPN3-207ENST00000397200 TMEM159Q96B96 161 aa14.52□□□□□ -0.09
CAPN3-207ENST00000397200 MARK4Q96L34 752 aa14.52□□□□□ -0.09
CAPN3-207ENST00000397200 NSUN5Q96P11 429 aaKnown RBP14.52□□□□□ -0.09
CAPN3-207ENST00000397200 TACO1Q9BSH4 297 aaKnown RBP14.52□□□□□ -0.09
CAPN3-207ENST00000397200 IRF2BPLQ9H1B7 796 aa14.52□□□□□ -0.09
CAPN3-207ENST00000397200 MID1IP1Q9NPA3 183 aa14.52□□□□□ -0.09
CAPN3-207ENST00000397200 TRNAU1APQ9NX07 287 aaKnown RBP14.52□□□□□ -0.09
CAPN3-207ENST00000397200 SLC23A2Q9UGH3 650 aa14.52□□□□□ -0.09
CAPN3-207ENST00000397200 APOBEC3BQ9UH17 382 aaKnown RBP14.52□□□□□ -0.09
CAPN3-207ENST00000397200 MCM8Q9UJA3 840 aa14.52□□□□□ -0.09
CAPN3-207ENST00000397200 PCTPQ9UKL6 214 aa14.52□□□□□ -0.09
CAPN3-207ENST00000397200 ZFC3H1O60293 1989 aaKnown RBP14.51□□□□□ -0.09
CAPN3-207ENST00000397200 WDFY4Q6ZS81 3184 aa14.51□□□□□ -0.09
CAPN3-207ENST00000397200 LIN7AO14910 233 aaPredicted RBP14.51□□□□□ -0.09
CAPN3-207ENST00000397200 CSF2P04141 144 aa14.51□□□□□ -0.09
CAPN3-207ENST00000397200 CTSEP14091 401 aa14.51□□□□□ -0.09
CAPN3-207ENST00000397200 NME1P15531 152 aaKnown RBP14.51□□□□□ -0.09
CAPN3-207ENST00000397200 JUNDP17535 347 aa14.51□□□□□ -0.09
CAPN3-207ENST00000397200 TSPAN8P19075 237 aa14.51□□□□□ -0.09
CAPN3-207ENST00000397200 CTSKP43235 329 aa14.51□□□□□ -0.09
CAPN3-207ENST00000397200 MRPL19P49406 292 aaKnown RBP14.51□□□□□ -0.09
CAPN3-207ENST00000397200 ACADVLP49748 655 aa14.51□□□□□ -0.09
CAPN3-207ENST00000397200 NUDT2P50583 147 aa14.51□□□□□ -0.09
CAPN3-207ENST00000397200 HSPA14Q0VDF9 509 aa14.51□□□□□ -0.09
CAPN3-207ENST00000397200 NFE2L1Q14494 772 aa14.51□□□□□ -0.09
CAPN3-207ENST00000397200 MAPRE2Q15555 327 aa14.51□□□□□ -0.09
CAPN3-207ENST00000397200 ZRSR2Q15696 482 aaKnown RBP14.51□□□□□ -0.09
CAPN3-207ENST00000397200 PPP1R3AQ16821 1122 aa14.51□□□□□ -0.09
CAPN3-207ENST00000397200 KIF19Q2TAC6 998 aa14.51□□□□□ -0.09
CAPN3-207ENST00000397200 PLEKHS1Q5SXH7 462 aa14.51□□□□□ -0.09
CAPN3-207ENST00000397200 LAIR1Q6GTX8 287 aa14.51□□□□□ -0.09
CAPN3-207ENST00000397200 SBSNQ6UWP8 590 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms