RNA–Protein interactions for RNA: ENST00000394456.9

GTF2F1-201, Transcript of general transcription factor IIF subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-201ENST00000394456 FOXJ1Q92949 421 aa13.16□□□□□ -0.3
GTF2F1-201ENST00000394456 ACDQ96AP0 544 aa13.16□□□□□ -0.3
GTF2F1-201ENST00000394456 PDLIM5Q96HC4 596 aaKnown RBP13.16□□□□□ -0.3
GTF2F1-201ENST00000394456 MAGEE1Q9HCI5 957 aa13.16□□□□□ -0.3
GTF2F1-201ENST00000394456 PPT2Q9UMR5 302 aa13.16□□□□□ -0.3
GTF2F1-201ENST00000394456 DGKBQ9Y6T7 804 aa13.16□□□□□ -0.3
GTF2F1-201ENST00000394456 PTGES3LE9PB15 166 aa13.16□□□□□ -0.3
GTF2F1-201ENST00000394456 PFDN6O15212 129 aa13.16□□□□□ -0.3
GTF2F1-201ENST00000394456 XPNPEP2O43895 674 aa13.16□□□□□ -0.3
GTF2F1-201ENST00000394456 HS6ST1O60243 411 aa13.16□□□□□ -0.3
GTF2F1-201ENST00000394456 SERPINA1P01009 418 aa13.16□□□□□ -0.3
GTF2F1-201ENST00000394456 CRHBPP24387 322 aa13.16□□□□□ -0.3
GTF2F1-201ENST00000394456 ACRV1P26436 265 aa13.16□□□□□ -0.3
GTF2F1-201ENST00000394456 GJA8P48165 433 aa13.16□□□□□ -0.3
GTF2F1-201ENST00000394456 CD47Q08722 323 aa13.16□□□□□ -0.3
GTF2F1-201ENST00000394456 LMAN2Q12907 356 aa13.16□□□□□ -0.3
GTF2F1-201ENST00000394456 SPIDRQ14159 915 aa13.16□□□□□ -0.3
GTF2F1-201ENST00000394456 INO80DQ53TQ3 878 aaPredicted RBP13.16□□□□□ -0.3
GTF2F1-201ENST00000394456 ZNF773Q6PK81 442 aa13.16□□□□□ -0.3
GTF2F1-201ENST00000394456 ZNF783Q6ZMS7 281 aa13.16□□□□□ -0.3
GTF2F1-201ENST00000394456 PIWIL3Q7Z3Z3 882 aaKnown RBP13.16□□□□□ -0.3
GTF2F1-201ENST00000394456 ZDHHC13Q8IUH4 622 aa13.16□□□□□ -0.3
GTF2F1-201ENST00000394456 DCAF4L2Q8NA75 395 aa13.16□□□□□ -0.3
GTF2F1-201ENST00000394456 CHDHQ8NE62 594 aaPredicted RBP13.16□□□□□ -0.3
GTF2F1-201ENST00000394456 OR13F1Q8NGS4 319 aa13.16□□□□□ -0.3
GTF2F1-201ENST00000394456 CNIH3Q8TBE1 160 aa13.16□□□□□ -0.3
GTF2F1-201ENST00000394456 FNDC8Q8TC99 324 aa13.16□□□□□ -0.3
GTF2F1-201ENST00000394456 DNAAF2Q9NVR5 837 aaKnown RBP13.16□□□□□ -0.3
GTF2F1-201ENST00000394456 CCL26Q9Y258 94 aa13.16□□□□□ -0.3
GTF2F1-201ENST00000394456 TNPO3Q9Y5L0 923 aaKnown RBP13.16□□□□□ -0.3
GTF2F1-201ENST00000394456 CHD9Q3L8U1 2897 aa13.16□□□□□ -0.3
GTF2F1-201ENST00000394456 GLYATL1P3A0A0U1RQE8 302 aa13.15□□□□□ -0.3
GTF2F1-201ENST00000394456 GNGT2O14610 69 aa13.15□□□□□ -0.3
GTF2F1-201ENST00000394456 LATS1O95835 1130 aa13.15□□□□□ -0.3
GTF2F1-201ENST00000394456 TRBC1P01850 177 aa13.15□□□□□ -0.3
GTF2F1-201ENST00000394456 LINC00271P0C7V0 271 aa13.15□□□□□ -0.3
GTF2F1-201ENST00000394456 CD9P21926 228 aa13.15□□□□□ -0.3
GTF2F1-201ENST00000394456 CCR7P32248 378 aa13.15□□□□□ -0.3
GTF2F1-201ENST00000394456 CCR2P41597 374 aa13.15□□□□□ -0.3
GTF2F1-201ENST00000394456 GNPDA1P46926 289 aa13.15□□□□□ -0.3
GTF2F1-201ENST00000394456 NUP107P57740 925 aa13.15□□□□□ -0.3
GTF2F1-201ENST00000394456 NFATC3Q12968 1075 aa13.15□□□□□ -0.3
GTF2F1-201ENST00000394456 PGS1Q32NB8 556 aa13.15□□□□□ -0.3
GTF2F1-201ENST00000394456 USP39Q53GS9 565 aaKnown RBP13.15□□□□□ -0.3
GTF2F1-201ENST00000394456 LAIR1Q6GTX8 287 aa13.15□□□□□ -0.3
GTF2F1-201ENST00000394456 EGFL6Q8IUX8 553 aa13.15□□□□□ -0.3
GTF2F1-201ENST00000394456 KREMEN2Q8NCW0 462 aa13.15□□□□□ -0.3
GTF2F1-201ENST00000394456 SKA2Q8WVK7 121 aaPredicted RBP13.15□□□□□ -0.3
GTF2F1-201ENST00000394456 ULK4Q96C45 1275 aa13.15□□□□□ -0.3
GTF2F1-201ENST00000394456 DOK1Q99704 481 aa13.15□□□□□ -0.3
GTF2F1-201ENST00000394456 EBPLQ9BY08 206 aa13.15□□□□□ -0.3
GTF2F1-201ENST00000394456 SERHLQ9NQF3 203 aa13.15□□□□□ -0.3
GTF2F1-201ENST00000394456 CXXC1Q9P0U4 656 aaPredicted RBP13.15□□□□□ -0.3
GTF2F1-201ENST00000394456 CDH7Q9ULB5 785 aa13.15□□□□□ -0.3
GTF2F1-201ENST00000394456 ERVK-11Q9UQG0 969 aa13.15□□□□□ -0.3
GTF2F1-201ENST00000394456 ELOVL7A1L3X0 281 aa13.15□□□□□ -0.3
GTF2F1-201ENST00000394456 HIDE1A8MVS5 230 aa13.15□□□□□ -0.3
GTF2F1-201ENST00000394456 RGS14O43566 566 aa13.15□□□□□ -0.3
GTF2F1-201ENST00000394456 ERVFC1P60507 584 aa13.15□□□□□ -0.3
GTF2F1-201ENST00000394456 AQP6Q13520 282 aa13.15□□□□□ -0.3
GTF2F1-201ENST00000394456 SPATS1Q496A3 300 aa13.15□□□□□ -0.3
GTF2F1-201ENST00000394456 RUNDC3AQ59EK9 446 aa13.15□□□□□ -0.3
GTF2F1-201ENST00000394456 ZNF648Q5T619 568 aaPredicted RBP13.15□□□□□ -0.3
GTF2F1-201ENST00000394456 SERPINA13PQ6UXR4 307 aa13.15□□□□□ -0.3
GTF2F1-201ENST00000394456 SNX20Q7Z614 316 aa13.15□□□□□ -0.3
GTF2F1-201ENST00000394456 BTLAQ7Z6A9 289 aa13.15□□□□□ -0.3
GTF2F1-201ENST00000394456 CMTM8Q8IZV2 173 aa13.15□□□□□ -0.3
GTF2F1-201ENST00000394456 RBFAQ8N0V3 343 aa13.15□□□□□ -0.3
GTF2F1-201ENST00000394456 SPARTQ8N0X7 666 aa13.15□□□□□ -0.3
GTF2F1-201ENST00000394456 STK40Q8N2I9 435 aa13.15□□□□□ -0.3
GTF2F1-201ENST00000394456 OR8J3Q8NGG0 315 aa13.15□□□□□ -0.3
GTF2F1-201ENST00000394456 APIPQ96GX9 242 aa13.15□□□□□ -0.3
GTF2F1-201ENST00000394456 PPP3R2Q96LZ3 170 aa13.15□□□□□ -0.3
GTF2F1-201ENST00000394456 C2orf49Q9BVC5 232 aaPredicted RBP13.15□□□□□ -0.3
GTF2F1-201ENST00000394456 OSBPL10Q9BXB5 764 aa13.15□□□□□ -0.3
GTF2F1-201ENST00000394456 SLC46A2Q9BY10 475 aa13.15□□□□□ -0.3
GTF2F1-201ENST00000394456 CLMPQ9H6B4 373 aa13.15□□□□□ -0.3
GTF2F1-201ENST00000394456 GNPTGQ9UJJ9 305 aa13.15□□□□□ -0.3
GTF2F1-201ENST00000394456 INTS6Q9UL03 887 aaKnown RBP13.15□□□□□ -0.3
GTF2F1-201ENST00000394456 EIF3LQ9Y262 564 aaKnown RBP13.15□□□□□ -0.3
GTF2F1-201ENST00000394456 PCDHB1Q9Y5F3 818 aa13.15□□□□□ -0.3
GTF2F1-201ENST00000394456 UNC80Q8N2C7 3258 aa13.14□□□□□ -0.31
GTF2F1-201ENST00000394456 BOLA2-SMG1P6H3BVE0 249 aa13.14□□□□□ -0.31
GTF2F1-201ENST00000394456 K7EPI3 171 aa13.14□□□□□ -0.31
GTF2F1-201ENST00000394456 C7P10643 843 aa13.14□□□□□ -0.31
GTF2F1-201ENST00000394456 ITPKAP23677 461 aa13.14□□□□□ -0.31
GTF2F1-201ENST00000394456 AKT1P31749 480 aa13.14□□□□□ -0.31
GTF2F1-201ENST00000394456 BMXP51813 675 aa13.14□□□□□ -0.31
GTF2F1-201ENST00000394456 PPP2R2BQ00005 443 aa13.14□□□□□ -0.31
GTF2F1-201ENST00000394456 IL1RL1Q01638 556 aa13.14□□□□□ -0.31
GTF2F1-201ENST00000394456 BCL2L1Q07817 233 aa13.14□□□□□ -0.31
GTF2F1-201ENST00000394456 HSPA14Q0VDF9 509 aa13.14□□□□□ -0.31
GTF2F1-201ENST00000394456 ATP13A5Q4VNC0 1218 aa13.14□□□□□ -0.31
GTF2F1-201ENST00000394456 CES5AQ6NT32 575 aa13.14□□□□□ -0.31
GTF2F1-201ENST00000394456 THAP5Q7Z6K1 395 aa13.14□□□□□ -0.31
GTF2F1-201ENST00000394456 CHPFQ8IZ52 775 aa13.14□□□□□ -0.31
GTF2F1-201ENST00000394456 PNPT1Q8TCS8 783 aaKnown RBP13.14□□□□□ -0.31
GTF2F1-201ENST00000394456 TCF25Q9BQ70 676 aa13.14□□□□□ -0.31
GTF2F1-201ENST00000394456 KAT8Q9H7Z6 458 aaKnown RBP13.14□□□□□ -0.31
GTF2F1-201ENST00000394456 DNMT3BQ9UBC3 853 aaKnown RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms