RNA–Protein interactions for RNA: ENST00000380180.7

PDLIM5-205, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-205ENST00000380180 ELOVL6Q9H5J4 265 aa19.3■□□□□ 0.68
PDLIM5-205ENST00000380180 TMEM45AQ9NWC5 275 aa19.3■□□□□ 0.68
PDLIM5-205ENST00000380180 FBXL12Q9NXK8 326 aa19.3■□□□□ 0.68
PDLIM5-205ENST00000380180 ZFR2Q9UPR6 939 aaKnown RBP19.3■□□□□ 0.68
PDLIM5-205ENST00000380180 ASPDHA6ND91 283 aa19.3■□□□□ 0.68
PDLIM5-205ENST00000380180 PRORSD1PA6NEY8 169 aa19.3■□□□□ 0.68
PDLIM5-205ENST00000380180 ANKRD28O15084 1053 aa19.3■□□□□ 0.68
PDLIM5-205ENST00000380180 ADAM23O75077 832 aa19.3■□□□□ 0.68
PDLIM5-205ENST00000380180 PAK4O96013 591 aaPredicted RBP19.3■□□□□ 0.68
PDLIM5-205ENST00000380180 PLOD1Q02809 727 aaPredicted RBP19.3■□□□□ 0.68
PDLIM5-205ENST00000380180 PRKG2Q13237 762 aa19.3■□□□□ 0.68
PDLIM5-205ENST00000380180 INPP5AQ14642 412 aa19.3■□□□□ 0.68
PDLIM5-205ENST00000380180 SMU1Q2TAY7 513 aa19.3■□□□□ 0.68
PDLIM5-205ENST00000380180 HM13Q8TCT9 377 aa19.3■□□□□ 0.68
PDLIM5-205ENST00000380180 GANCQ8TET4 914 aa19.3■□□□□ 0.68
PDLIM5-205ENST00000380180 HOPXQ9BPY8 73 aaPredicted RBP19.3■□□□□ 0.68
PDLIM5-205ENST00000380180 LRTM1Q9HBL6 345 aa19.3■□□□□ 0.68
PDLIM5-205ENST00000380180 MRPL40Q9NQ50 206 aaKnown RBP19.3■□□□□ 0.68
PDLIM5-205ENST00000380180 CD300AQ9UGN4 299 aa19.3■□□□□ 0.68
PDLIM5-205ENST00000380180 ACOT8O14734 319 aa19.29■□□□□ 0.68
PDLIM5-205ENST00000380180 SLC7A2P52569 658 aa19.29■□□□□ 0.68
PDLIM5-205ENST00000380180 ATXN3P54252 364 aaPredicted RBP19.29■□□□□ 0.68
PDLIM5-205ENST00000380180 MAD2L1Q13257 205 aaPredicted RBP19.29■□□□□ 0.68
PDLIM5-205ENST00000380180 FGL2Q14314 439 aa19.29■□□□□ 0.68
PDLIM5-205ENST00000380180 STARD3Q14849 445 aa19.29■□□□□ 0.68
PDLIM5-205ENST00000380180 COL19A1Q14993 1142 aa19.29■□□□□ 0.68
PDLIM5-205ENST00000380180 TLR1Q15399 786 aa19.29■□□□□ 0.68
PDLIM5-205ENST00000380180 FAM83HQ6ZRV2 1179 aaPredicted RBP19.29■□□□□ 0.68
PDLIM5-205ENST00000380180 MINDY1Q8N5J2 469 aa19.29■□□□□ 0.68
PDLIM5-205ENST00000380180 FBXO15Q8NCQ5 510 aaPredicted RBP19.29■□□□□ 0.68
PDLIM5-205ENST00000380180 OR56A3Q8NH54 315 aa19.29■□□□□ 0.68
PDLIM5-205ENST00000380180 KLK6Q92876 244 aa19.29■□□□□ 0.68
PDLIM5-205ENST00000380180 OR4K3Q96R72 315 aa19.29■□□□□ 0.68
PDLIM5-205ENST00000380180 GID8Q9NWU2 228 aa19.29■□□□□ 0.68
PDLIM5-205ENST00000380180 EIF3LQ9Y262 564 aaKnown RBP19.29■□□□□ 0.68
PDLIM5-205ENST00000380180 PRR23AA6NEV1 266 aa19.29■□□□□ 0.68
PDLIM5-205ENST00000380180 FXYD1O00168 92 aa19.29■□□□□ 0.68
PDLIM5-205ENST00000380180 EEDO75530 441 aaKnown RBP19.29■□□□□ 0.68
PDLIM5-205ENST00000380180 BCAS2O75934 225 aaPredicted RBP19.29■□□□□ 0.68
PDLIM5-205ENST00000380180 RSL1D1O76021 490 aaKnown RBP19.29■□□□□ 0.68
PDLIM5-205ENST00000380180 KLF8O95600 359 aaPredicted RBP19.29■□□□□ 0.68
PDLIM5-205ENST00000380180 VHLP40337 213 aa19.29■□□□□ 0.68
PDLIM5-205ENST00000380180 IRF8Q02556 426 aa19.29■□□□□ 0.68
PDLIM5-205ENST00000380180 ADGRE1Q14246 886 aa19.29■□□□□ 0.68
PDLIM5-205ENST00000380180 TRIM25Q14258 630 aaKnown RBP19.29■□□□□ 0.68
PDLIM5-205ENST00000380180 PAGE3Q5JUK9 113 aa19.29■□□□□ 0.68
PDLIM5-205ENST00000380180 LIPJQ5W064 366 aa19.29■□□□□ 0.68
PDLIM5-205ENST00000380180 ZFAND4Q86XD8 727 aa19.29■□□□□ 0.68
PDLIM5-205ENST00000380180 KLHDC8AQ8IYD2 350 aa19.29■□□□□ 0.68
PDLIM5-205ENST00000380180 OR14C36Q8NHC7 312 aa19.29■□□□□ 0.68
PDLIM5-205ENST00000380180 NUDT8Q8WV74 236 aa19.29■□□□□ 0.68
PDLIM5-205ENST00000380180 LRRC58Q96CX6 371 aa19.29■□□□□ 0.68
PDLIM5-205ENST00000380180 ASB9Q96DX5 294 aa19.29■□□□□ 0.68
PDLIM5-205ENST00000380180 DPEP2Q9H4A9 486 aa19.29■□□□□ 0.68
PDLIM5-205ENST00000380180 C1orf109Q9NX04 203 aa19.29■□□□□ 0.68
PDLIM5-205ENST00000380180 SUCOQ9UBS9 1254 aaKnown RBP19.29■□□□□ 0.68
PDLIM5-205ENST00000380180 TNRC18O15417 2968 aaPredicted RBP19.28■□□□□ 0.68
PDLIM5-205ENST00000380180 A0A1W2PQF6 199 aa19.28■□□□□ 0.68
PDLIM5-205ENST00000380180 H3BQ06 376 aaPredicted RBP19.28■□□□□ 0.68
PDLIM5-205ENST00000380180 MAP3K7O43318 606 aa19.28■□□□□ 0.68
PDLIM5-205ENST00000380180 JUPP14923 745 aa19.28■□□□□ 0.68
PDLIM5-205ENST00000380180 COL9A1P20849 921 aa19.28■□□□□ 0.68
PDLIM5-205ENST00000380180 ACADLP28330 430 aa19.28■□□□□ 0.68
PDLIM5-205ENST00000380180 CCR3P51677 355 aa19.28■□□□□ 0.68
PDLIM5-205ENST00000380180 CAPRIN1Q14444 709 aaKnown RBP19.28■□□□□ 0.68
PDLIM5-205ENST00000380180 TIGD2Q4W5G0 525 aa19.28■□□□□ 0.68
PDLIM5-205ENST00000380180 XKR6Q5GH73 641 aa19.28■□□□□ 0.68
PDLIM5-205ENST00000380180 SAMD4BQ5PRF9 694 aaKnown RBP19.28■□□□□ 0.68
PDLIM5-205ENST00000380180 RNF111Q6ZNA4 994 aa19.28■□□□□ 0.68
PDLIM5-205ENST00000380180 BHLHE22Q8NFJ8 381 aaPredicted RBP19.28■□□□□ 0.68
PDLIM5-205ENST00000380180 MAGEB10Q96LZ2 347 aaPredicted RBP19.28■□□□□ 0.68
PDLIM5-205ENST00000380180 TEX101Q9BY14 249 aa19.28■□□□□ 0.68
PDLIM5-205ENST00000380180 PCDHAC1Q9H158 963 aa19.28■□□□□ 0.68
PDLIM5-205ENST00000380180 SLC23A2Q9UGH3 650 aa19.28■□□□□ 0.68
PDLIM5-205ENST00000380180 BCAP29Q9UHQ4 241 aa19.28■□□□□ 0.68
PDLIM5-205ENST00000380180 CD207Q9UJ71 328 aa19.28■□□□□ 0.68
PDLIM5-205ENST00000380180 LEF1Q9UJU2 399 aaPredicted RBP19.28■□□□□ 0.68
PDLIM5-205ENST00000380180 OR1A2Q9Y585 309 aa19.28■□□□□ 0.68
PDLIM5-205ENST00000380180 PIAS3Q9Y6X2 628 aa19.28■□□□□ 0.68
PDLIM5-205ENST00000380180 E7EQ34 232 aa19.27■□□□□ 0.68
PDLIM5-205ENST00000380180 CLGNO14967 610 aa19.27■□□□□ 0.68
PDLIM5-205ENST00000380180 UGDHO60701 494 aa19.27■□□□□ 0.68
PDLIM5-205ENST00000380180 DNTTP04053 509 aa19.27■□□□□ 0.68
PDLIM5-205ENST00000380180 HOXB2P14652 356 aa19.27■□□□□ 0.68
PDLIM5-205ENST00000380180 CD22P20273 847 aa19.27■□□□□ 0.68
PDLIM5-205ENST00000380180 IGFBP4P22692 258 aa19.27■□□□□ 0.68
PDLIM5-205ENST00000380180 RPS21P63220 83 aaKnown RBP19.27■□□□□ 0.68
PDLIM5-205ENST00000380180 YBX1P67809 324 aaKnown RBP19.27■□□□□ 0.68
PDLIM5-205ENST00000380180 PTGR1Q14914 329 aa19.27■□□□□ 0.68
PDLIM5-205ENST00000380180 KIAA0040Q15053 153 aa19.27■□□□□ 0.68
PDLIM5-205ENST00000380180 IRF4Q15306 451 aa19.27■□□□□ 0.68
PDLIM5-205ENST00000380180 FRG2Q64ET8 278 aa19.27■□□□□ 0.68
PDLIM5-205ENST00000380180 LRRTM4Q86VH4 590 aa19.27■□□□□ 0.68
PDLIM5-205ENST00000380180 AMZ2Q86W34 360 aa19.27■□□□□ 0.68
PDLIM5-205ENST00000380180 SPDYE1Q8NFV5 336 aaPredicted RBP19.27■□□□□ 0.68
PDLIM5-205ENST00000380180 ZNF480Q8WV37 535 aa19.27■□□□□ 0.68
PDLIM5-205ENST00000380180 FRG2BQ96QU4 278 aa19.27■□□□□ 0.68
PDLIM5-205ENST00000380180 LRRC42Q9Y546 428 aa19.27■□□□□ 0.68
PDLIM5-205ENST00000380180 PLRG1O43660 514 aaKnown RBP19.27■□□□□ 0.67
PDLIM5-205ENST00000380180 JAK1P23458 1154 aa19.27■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms