RNA–Protein interactions for RNA: ENST00000374685.8

RXRB-202, Transcript of retinoid X receptor beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RXRB, Length 2,846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-202ENST00000374685 GTDC1Q4AE62 458 aa17.83■□□□□ 0.45
RXRB-202ENST00000374685 TMEM53Q6P2H8 277 aa17.83■□□□□ 0.45
RXRB-202ENST00000374685 NEK5Q6P3R8 708 aa17.83■□□□□ 0.45
RXRB-202ENST00000374685 SUSD1Q6UWL2 747 aa17.83■□□□□ 0.45
RXRB-202ENST00000374685 PATL1Q86TB9 770 aaKnown RBP17.83■□□□□ 0.45
RXRB-202ENST00000374685 GPR65Q8IYL9 337 aa17.83■□□□□ 0.45
RXRB-202ENST00000374685 ARMC5Q96C12 935 aa17.83■□□□□ 0.45
RXRB-202ENST00000374685 AP2M1Q96CW1 435 aa17.83■□□□□ 0.45
RXRB-202ENST00000374685 AURKBQ96GD4 344 aaPredicted RBP17.83■□□□□ 0.45
RXRB-202ENST00000374685 EBPLQ9BY08 206 aa17.83■□□□□ 0.45
RXRB-202ENST00000374685 ZIM2Q9NZV7 527 aa17.83■□□□□ 0.45
RXRB-202ENST00000374685 AGAP14A8MT82 685 aa17.83■□□□□ 0.44
RXRB-202ENST00000374685 CBFA2T3O75081 653 aa17.83■□□□□ 0.44
RXRB-202ENST00000374685 CYP2A6P11509 494 aaPredicted RBP17.83■□□□□ 0.44
RXRB-202ENST00000374685 EPORP19235 508 aa17.83■□□□□ 0.44
RXRB-202ENST00000374685 NFKBIAP25963 317 aa17.83■□□□□ 0.44
RXRB-202ENST00000374685 GNPDA1P46926 289 aa17.83■□□□□ 0.44
RXRB-202ENST00000374685 FNDC3BQ53EP0 1204 aaKnown RBP17.83■□□□□ 0.44
RXRB-202ENST00000374685 PRRT4C9JH25 899 aa17.82■□□□□ 0.44
RXRB-202ENST00000374685 CFAP99D6REC4 459 aa17.82■□□□□ 0.44
RXRB-202ENST00000374685 SOCS2O14508 198 aa17.82■□□□□ 0.44
RXRB-202ENST00000374685 EPHA5P54756 1037 aa17.82■□□□□ 0.44
RXRB-202ENST00000374685 INPP5AQ14642 412 aa17.82■□□□□ 0.44
RXRB-202ENST00000374685 PARS2Q7L3T8 475 aaKnown RBP17.82■□□□□ 0.44
RXRB-202ENST00000374685 PPP3R2Q96LZ3 170 aa17.82■□□□□ 0.44
RXRB-202ENST00000374685 ZBTB18Q99592 522 aa17.82■□□□□ 0.44
RXRB-202ENST00000374685 PRPF18Q99633 342 aaKnown RBP17.82■□□□□ 0.44
RXRB-202ENST00000374685 ACPTQ9BZG2 426 aa17.82■□□□□ 0.44
RXRB-202ENST00000374685 Q9H521 79 aa17.82■□□□□ 0.44
RXRB-202ENST00000374685 SLC32A1Q9H598 525 aa17.82■□□□□ 0.44
RXRB-202ENST00000374685 DLGAP4Q9Y2H0 992 aa17.82■□□□□ 0.44
RXRB-202ENST00000374685 RNF103-CHMP3A0A140T963 221 aa17.82■□□□□ 0.44
RXRB-202ENST00000374685 DENRO43583 198 aaKnown RBP17.82■□□□□ 0.44
RXRB-202ENST00000374685 EFNA1P20827 205 aaPredicted RBP17.82■□□□□ 0.44
RXRB-202ENST00000374685 BDKRB1P46663 353 aa17.82■□□□□ 0.44
RXRB-202ENST00000374685 PRSS36Q5K4E3 855 aa17.82■□□□□ 0.44
RXRB-202ENST00000374685 RAVER1Q8IY67 606 aaKnown RBP17.82■□□□□ 0.44
RXRB-202ENST00000374685 MTERF1Q99551 399 aaKnown RBP17.82■□□□□ 0.44
RXRB-202ENST00000374685 VAPAQ9P0L0 249 aa17.82■□□□□ 0.44
RXRB-202ENST00000374685 THEGQ9P2T0 379 aa17.82■□□□□ 0.44
RXRB-202ENST00000374685 LZTS1Q9Y250 596 aa17.82■□□□□ 0.44
RXRB-202ENST00000374685 K7ESM1 405 aa17.81■□□□□ 0.44
RXRB-202ENST00000374685 ZNF26P17031 533 aaPredicted RBP17.81■□□□□ 0.44
RXRB-202ENST00000374685 IL10P22301 178 aa17.81■□□□□ 0.44
RXRB-202ENST00000374685 RPL10P27635 214 aaKnown RBP17.81■□□□□ 0.44
RXRB-202ENST00000374685 NAA20P61599 178 aa17.81■□□□□ 0.44
RXRB-202ENST00000374685 PGS1Q32NB8 556 aa17.81■□□□□ 0.44
RXRB-202ENST00000374685 PHACTR4Q8IZ21 702 aa17.81■□□□□ 0.44
RXRB-202ENST00000374685 CBR4Q8N4T8 237 aa17.81■□□□□ 0.44
RXRB-202ENST00000374685 CATSPER1Q8NEC5 780 aa17.81■□□□□ 0.44
RXRB-202ENST00000374685 ASB11Q8WXH4 323 aa17.81■□□□□ 0.44
RXRB-202ENST00000374685 FIG4Q92562 907 aa17.81■□□□□ 0.44
RXRB-202ENST00000374685 ZNF707Q96C28 371 aaPredicted RBP17.81■□□□□ 0.44
RXRB-202ENST00000374685 EGLN2Q96KS0 407 aa17.81■□□□□ 0.44
RXRB-202ENST00000374685 APOLD1Q96LR9 279 aa17.81■□□□□ 0.44
RXRB-202ENST00000374685 RNF145Q96MT1 663 aa17.81■□□□□ 0.44
RXRB-202ENST00000374685 IGFLR1Q9H665 355 aa17.81■□□□□ 0.44
RXRB-202ENST00000374685 HEBP1Q9NRV9 189 aa17.81■□□□□ 0.44
RXRB-202ENST00000374685 TACR1P25103 407 aa17.81■□□□□ 0.44
RXRB-202ENST00000374685 DDX6P26196 483 aaKnown RBP eCLIP17.81■□□□□ 0.44
RXRB-202ENST00000374685 PDHA2P29803 388 aa17.81■□□□□ 0.44
RXRB-202ENST00000374685 RAB15P59190 212 aa17.81■□□□□ 0.44
RXRB-202ENST00000374685 MAPKAPK3Q16644 382 aa17.81■□□□□ 0.44
RXRB-202ENST00000374685 CACHD1Q5VU97 1274 aa17.81■□□□□ 0.44
RXRB-202ENST00000374685 MCOLN3Q8TDD5 553 aa17.81■□□□□ 0.44
RXRB-202ENST00000374685 TRIM15Q9C019 465 aa17.81■□□□□ 0.44
RXRB-202ENST00000374685 RPF2Q9H7B2 306 aaKnown RBP17.81■□□□□ 0.44
RXRB-202ENST00000374685 PPIL1Q9Y3C6 166 aa17.81■□□□□ 0.44
RXRB-202ENST00000374685 PRKAB1Q9Y478 270 aa17.81■□□□□ 0.44
RXRB-202ENST00000374685 CCL27Q9Y4X3 112 aa17.81■□□□□ 0.44
RXRB-202ENST00000374685 SEC24DO94855 1032 aaPredicted RBP17.8■□□□□ 0.44
RXRB-202ENST00000374685 KRT6AP02538 564 aa17.8■□□□□ 0.44
RXRB-202ENST00000374685 KRT6BP04259 564 aa17.8■□□□□ 0.44
RXRB-202ENST00000374685 EBLN1P0CF75 366 aa17.8■□□□□ 0.44
RXRB-202ENST00000374685 MAP4P27816 1152 aaKnown RBP17.8■□□□□ 0.44
RXRB-202ENST00000374685 KRT6CP48668 564 aa17.8■□□□□ 0.44
RXRB-202ENST00000374685 ZNF805Q5CZA5 627 aa17.8■□□□□ 0.44
RXRB-202ENST00000374685 GET4Q7L5D6 327 aaPredicted RBP17.8■□□□□ 0.44
RXRB-202ENST00000374685 TICAM1Q8IUC6 712 aa17.8■□□□□ 0.44
RXRB-202ENST00000374685 RASGEF1AQ8N9B8 481 aa17.8■□□□□ 0.44
RXRB-202ENST00000374685 OR10A6Q8NH74 314 aa17.8■□□□□ 0.44
RXRB-202ENST00000374685 ACTR3BQ9P1U1 418 aa17.8■□□□□ 0.44
RXRB-202ENST00000374685 PRAMEF4O60810 478 aa17.8■□□□□ 0.44
RXRB-202ENST00000374685 HSD17B1P14061 328 aa17.8■□□□□ 0.44
RXRB-202ENST00000374685 CYP2A7P20853 494 aa17.8■□□□□ 0.44
RXRB-202ENST00000374685 PRKCQQ04759 706 aa17.8■□□□□ 0.44
RXRB-202ENST00000374685 CHIT1Q13231 466 aa17.8■□□□□ 0.44
RXRB-202ENST00000374685 PRAMEF9Q5VWM5 478 aa17.8■□□□□ 0.44
RXRB-202ENST00000374685 ADNP2Q6IQ32 1131 aa17.8■□□□□ 0.44
RXRB-202ENST00000374685 DHRS4L2Q6PKH6 230 aa17.8■□□□□ 0.44
RXRB-202ENST00000374685 OR10Q1Q8NGQ4 319 aa17.8■□□□□ 0.44
RXRB-202ENST00000374685 SLC13A3Q8WWT9 602 aa17.8■□□□□ 0.44
RXRB-202ENST00000374685 TMEM159Q96B96 161 aa17.8■□□□□ 0.44
RXRB-202ENST00000374685 VPS50Q96JG6 964 aa17.8■□□□□ 0.44
RXRB-202ENST00000374685 OR52E6Q96RD3 313 aa17.8■□□□□ 0.44
RXRB-202ENST00000374685 CGREF1Q99674 301 aa17.8■□□□□ 0.44
RXRB-202ENST00000374685 TRPV5Q9NQA5 729 aa17.8■□□□□ 0.44
RXRB-202ENST00000374685 ST14Q9Y5Y6 855 aa17.8■□□□□ 0.44
RXRB-202ENST00000374685 CLIC3O95833 236 aa17.8■□□□□ 0.44
RXRB-202ENST00000374685 BCKDHAP12694 445 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms