RNA–Protein interactions for RNA: ENST00000372066.7

LDB3-204, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,598 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-204ENST00000372066 PRORSD1PA6NEY8 169 aa13.75□□□□□ -0.21
LDB3-204ENST00000372066 AQP12BA6NM10 295 aa13.75□□□□□ -0.21
LDB3-204ENST00000372066 CFAP99D6REC4 459 aa13.75□□□□□ -0.21
LDB3-204ENST00000372066 H0YJX3 145 aa13.75□□□□□ -0.21
LDB3-204ENST00000372066 K7EPI3 171 aa13.75□□□□□ -0.21
LDB3-204ENST00000372066 SLC28A1O00337 649 aa13.75□□□□□ -0.21
LDB3-204ENST00000372066 OR7A17O14581 309 aa13.75□□□□□ -0.21
LDB3-204ENST00000372066 SLC16A5O15375 505 aa13.75□□□□□ -0.21
LDB3-204ENST00000372066 KATNA1O75449 491 aa13.75□□□□□ -0.21
LDB3-204ENST00000372066 AP2A2O94973 939 aa13.75□□□□□ -0.21
LDB3-204ENST00000372066 CAPN1P07384 714 aa13.75□□□□□ -0.21
LDB3-204ENST00000372066 SRPRAP08240 638 aaKnown RBP13.75□□□□□ -0.21
LDB3-204ENST00000372066 ANXA5P08758 320 aa13.75□□□□□ -0.21
LDB3-204ENST00000372066 C1SP09871 688 aa13.75□□□□□ -0.21
LDB3-204ENST00000372066 EBLN1P0CF75 366 aa13.75□□□□□ -0.21
LDB3-204ENST00000372066 LHCGRP22888 699 aa13.75□□□□□ -0.21
LDB3-204ENST00000372066 PRDX3P30048 256 aaKnown RBP13.75□□□□□ -0.21
LDB3-204ENST00000372066 SLC7A1P30825 629 aa13.75□□□□□ -0.21
LDB3-204ENST00000372066 VIPR1P32241 457 aa13.75□□□□□ -0.21
LDB3-204ENST00000372066 TNFRSF4P43489 277 aa13.75□□□□□ -0.21
LDB3-204ENST00000372066 PTSQ03393 145 aa13.75□□□□□ -0.21
LDB3-204ENST00000372066 MED21Q13503 144 aa13.75□□□□□ -0.21
LDB3-204ENST00000372066 UAP1L1Q3KQV9 507 aa13.75□□□□□ -0.21
LDB3-204ENST00000372066 PLEKHS1Q5SXH7 462 aa13.75□□□□□ -0.21
LDB3-204ENST00000372066 LPCAT4Q643R3 524 aa13.75□□□□□ -0.21
LDB3-204ENST00000372066 NEK10Q6ZWH5 1172 aa13.75□□□□□ -0.21
LDB3-204ENST00000372066 MILR1Q7Z6M3 343 aa13.75□□□□□ -0.21
LDB3-204ENST00000372066 ADIPOR2Q86V24 386 aa13.75□□□□□ -0.21
LDB3-204ENST00000372066 DHFR2Q86XF0 187 aa13.75□□□□□ -0.21
LDB3-204ENST00000372066 AQP12AQ8IXF9 295 aa13.75□□□□□ -0.21
LDB3-204ENST00000372066 RAVER1Q8IY67 606 aaKnown RBP13.75□□□□□ -0.21
LDB3-204ENST00000372066 RNF148Q8N7C7 305 aa13.75□□□□□ -0.21
LDB3-204ENST00000372066 NAT16Q8N8M0 369 aa13.75□□□□□ -0.21
LDB3-204ENST00000372066 OR4F6Q8NGB9 312 aa13.75□□□□□ -0.21
LDB3-204ENST00000372066 OR52B6Q8NGF0 335 aa13.75□□□□□ -0.21
LDB3-204ENST00000372066 RHBDF1Q96CC6 855 aa13.75□□□□□ -0.21
LDB3-204ENST00000372066 SPACA7Q96KW9 195 aa13.75□□□□□ -0.21
LDB3-204ENST00000372066 MAGEB10Q96LZ2 347 aaPredicted RBP13.75□□□□□ -0.21
LDB3-204ENST00000372066 NTMT1Q9BV86 223 aa13.75□□□□□ -0.21
LDB3-204ENST00000372066 IPPKQ9H8X2 491 aa13.75□□□□□ -0.21
LDB3-204ENST00000372066 ZDHHC4Q9NPG8 344 aa13.75□□□□□ -0.21
LDB3-204ENST00000372066 SLC52A3Q9NQ40 469 aa13.75□□□□□ -0.21
LDB3-204ENST00000372066 MAP10Q9P2G4 905 aa13.75□□□□□ -0.21
LDB3-204ENST00000372066 PDP2Q9P2J9 529 aa13.75□□□□□ -0.21
LDB3-204ENST00000372066 B4GALT6Q9UBX8 382 aa13.75□□□□□ -0.21
LDB3-204ENST00000372066 RAB26Q9ULW5 256 aa13.75□□□□□ -0.21
LDB3-204ENST00000372066 MAP1BP46821 2468 aaKnown RBP13.75□□□□□ -0.21
LDB3-204ENST00000372066 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.74□□□□□ -0.21
LDB3-204ENST00000372066 PABPN1LA6NDY0 278 aaKnown RBP13.74□□□□□ -0.21
LDB3-204ENST00000372066 FXYD1O00168 92 aa13.74□□□□□ -0.21
LDB3-204ENST00000372066 CDX4O14627 284 aaPredicted RBP13.74□□□□□ -0.21
LDB3-204ENST00000372066 RGS14O43566 566 aa13.74□□□□□ -0.21
LDB3-204ENST00000372066 NUAK1O60285 661 aa13.74□□□□□ -0.21
LDB3-204ENST00000372066 SYNCRIPO60506 623 aaKnown RBP13.74□□□□□ -0.21
LDB3-204ENST00000372066 DNAJA2O60884 412 aa13.74□□□□□ -0.21
LDB3-204ENST00000372066 PIM1P11309 404 aaPredicted RBP13.74□□□□□ -0.21
LDB3-204ENST00000372066 P2RY2P41231 377 aa13.74□□□□□ -0.21
LDB3-204ENST00000372066 KIR2DL1P43626 348 aaPredicted RBP13.74□□□□□ -0.21
LDB3-204ENST00000372066 PRKG2Q13237 762 aa13.74□□□□□ -0.21
LDB3-204ENST00000372066 SFT2D3Q587I9 215 aa13.74□□□□□ -0.21
LDB3-204ENST00000372066 TMEM154Q6P9G4 183 aa13.74□□□□□ -0.21
LDB3-204ENST00000372066 IL27RAQ6UWB1 636 aa13.74□□□□□ -0.21
LDB3-204ENST00000372066 Q6ZVU0 165 aa13.74□□□□□ -0.21
LDB3-204ENST00000372066 ARMCX6Q7L4S7 300 aa13.74□□□□□ -0.21
LDB3-204ENST00000372066 LRRC70Q7Z2Q7 622 aa13.74□□□□□ -0.21
LDB3-204ENST00000372066 TICAM1Q8IUC6 712 aa13.74□□□□□ -0.21
LDB3-204ENST00000372066 TMEFF1Q8IYR6 380 aa13.74□□□□□ -0.21
LDB3-204ENST00000372066 CLDN19Q8N6F1 224 aa13.74□□□□□ -0.21
LDB3-204ENST00000372066 FRMD1Q8N878 549 aa13.74□□□□□ -0.21
LDB3-204ENST00000372066 FNDC5Q8NAU1 212 aa13.74□□□□□ -0.21
LDB3-204ENST00000372066 OR2A12Q8NGT7 310 aa13.74□□□□□ -0.21
LDB3-204ENST00000372066 OR2T11Q8NH01 316 aa13.74□□□□□ -0.21
LDB3-204ENST00000372066 HMGB4Q8WW32 186 aa13.74□□□□□ -0.21
LDB3-204ENST00000372066 LRRC58Q96CX6 371 aa13.74□□□□□ -0.21
LDB3-204ENST00000372066 KLHL32Q96NJ5 620 aa13.74□□□□□ -0.21
LDB3-204ENST00000372066 TMEM79Q9BSE2 394 aa13.74□□□□□ -0.21
LDB3-204ENST00000372066 ASIC5Q9NY37 505 aa13.74□□□□□ -0.21
LDB3-204ENST00000372066 DKK3Q9UBP4 350 aa13.74□□□□□ -0.21
LDB3-204ENST00000372066 ASB1Q9Y576 335 aa13.74□□□□□ -0.21
LDB3-204ENST00000372066 AP4S1Q9Y587 144 aa13.74□□□□□ -0.21
LDB3-204ENST00000372066 SPAG17Q6Q759 2223 aa13.73□□□□□ -0.21
LDB3-204ENST00000372066 TCRBV21S2A2A0A5A6 115 aa13.73□□□□□ -0.21
LDB3-204ENST00000372066 CCDC154A6NI56 674 aa13.73□□□□□ -0.21
LDB3-204ENST00000372066 TAPBPO15533 448 aa13.73□□□□□ -0.21
LDB3-204ENST00000372066 EPB42P16452 691 aa13.73□□□□□ -0.21
LDB3-204ENST00000372066 ITGB6P18564 788 aa13.73□□□□□ -0.21
LDB3-204ENST00000372066 TCN1P20061 433 aaPredicted RBP13.73□□□□□ -0.21
LDB3-204ENST00000372066 AOAHP28039 575 aa13.73□□□□□ -0.21
LDB3-204ENST00000372066 CA5AP35218 305 aa13.73□□□□□ -0.21
LDB3-204ENST00000372066 GGT5P36269 586 aa13.73□□□□□ -0.21
LDB3-204ENST00000372066 ARL1P40616 181 aaPredicted RBP13.73□□□□□ -0.21
LDB3-204ENST00000372066 HSPA7P48741 367 aa13.73□□□□□ -0.21
LDB3-204ENST00000372066 POLR2JP52435 117 aaKnown RBP13.73□□□□□ -0.21
LDB3-204ENST00000372066 DIO3P55073 304 aa13.73□□□□□ -0.21
LDB3-204ENST00000372066 AQP4P55087 323 aa13.73□□□□□ -0.21
LDB3-204ENST00000372066 EEFSECP57772 596 aaKnown RBP13.73□□□□□ -0.21
LDB3-204ENST00000372066 FOXC1Q12948 553 aa13.73□□□□□ -0.21
LDB3-204ENST00000372066 VPS26BQ4G0F5 336 aa13.73□□□□□ -0.21
LDB3-204ENST00000372066 ATP13A5Q4VNC0 1218 aa13.73□□□□□ -0.21
LDB3-204ENST00000372066 TRIM61Q5EBN2 209 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 98 ms