RNA–Protein interactions for RNA: ENST00000368690.7

CHTOP-203, Transcript of chromatin target of PRMT1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CHTOP, Length 2,165 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-203ENST00000368690 CTSKP43235 329 aa17.03■□□□□ 0.32
CHTOP-203ENST00000368690 DAPP51397 102 aa17.03■□□□□ 0.32
CHTOP-203ENST00000368690 HK3P52790 923 aa17.03■□□□□ 0.32
CHTOP-203ENST00000368690 DMPKQ09013 629 aa17.03■□□□□ 0.32
CHTOP-203ENST00000368690 TBCEQ15813 527 aaPredicted RBP17.03■□□□□ 0.32
CHTOP-203ENST00000368690 AFTPHQ6ULP2 937 aa17.03■□□□□ 0.32
CHTOP-203ENST00000368690 GDPD3Q7L5L3 318 aa17.03■□□□□ 0.32
CHTOP-203ENST00000368690 FAM83FQ8NEG4 500 aaPredicted RBP17.03■□□□□ 0.32
CHTOP-203ENST00000368690 OR13C4Q8NGS5 318 aa17.03■□□□□ 0.32
CHTOP-203ENST00000368690 BLOC1S5Q8TDH9 187 aa17.03■□□□□ 0.32
CHTOP-203ENST00000368690 RASSF5Q8WWW0 418 aa17.03■□□□□ 0.32
CHTOP-203ENST00000368690 NCLNQ969V3 563 aa17.03■□□□□ 0.32
CHTOP-203ENST00000368690 CEP295NLQ96MC4 621 aa17.03■□□□□ 0.32
CHTOP-203ENST00000368690 KLHL5Q96PQ7 755 aa17.03■□□□□ 0.32
CHTOP-203ENST00000368690 RNF208Q9H0X6 261 aa17.03■□□□□ 0.32
CHTOP-203ENST00000368690 PRDM5Q9NQX1 630 aaPredicted RBP17.03■□□□□ 0.32
CHTOP-203ENST00000368690 NLE1Q9NVX2 485 aaPredicted RBP17.03■□□□□ 0.32
CHTOP-203ENST00000368690 TMEM248Q9NWD8 314 aa17.03■□□□□ 0.32
CHTOP-203ENST00000368690 CD274Q9NZQ7 290 aa17.03■□□□□ 0.32
CHTOP-203ENST00000368690 PNMA8BQ9ULN7 279 aaPredicted RBP17.03■□□□□ 0.32
CHTOP-203ENST00000368690 FAM50BQ9Y247 325 aa17.03■□□□□ 0.32
CHTOP-203ENST00000368690 RNF6Q9Y252 685 aa17.03■□□□□ 0.32
CHTOP-203ENST00000368690 TNPO3Q9Y5L0 923 aaKnown RBP17.03■□□□□ 0.32
CHTOP-203ENST00000368690 UBA6A0AVT1 1052 aaPredicted RBP17.02■□□□□ 0.32
CHTOP-203ENST00000368690 NCF1BA6NI72 391 aaPredicted RBP17.02■□□□□ 0.32
CHTOP-203ENST00000368690 NCF1CA8MVU1 366 aaPredicted RBP17.02■□□□□ 0.32
CHTOP-203ENST00000368690 MUSKO15146 869 aa17.02■□□□□ 0.32
CHTOP-203ENST00000368690 VPS26AO75436 327 aa17.02■□□□□ 0.32
CHTOP-203ENST00000368690 NCF1P14598 390 aaPredicted RBP17.02■□□□□ 0.32
CHTOP-203ENST00000368690 FMO4P31512 558 aa17.02■□□□□ 0.32
CHTOP-203ENST00000368690 KRT20P35900 424 aa17.02■□□□□ 0.32
CHTOP-203ENST00000368690 GGT5P36269 586 aa17.02■□□□□ 0.32
CHTOP-203ENST00000368690 FPGSQ05932 587 aa17.02■□□□□ 0.32
CHTOP-203ENST00000368690 PPP1R8Q12972 351 aaKnown RBP17.02■□□□□ 0.32
CHTOP-203ENST00000368690 SIM2Q14190 667 aaPredicted RBP17.02■□□□□ 0.32
CHTOP-203ENST00000368690 CARTPTQ16568 116 aa17.02■□□□□ 0.32
CHTOP-203ENST00000368690 RFTN2Q52LD8 501 aaPredicted RBP17.02■□□□□ 0.32
CHTOP-203ENST00000368690 GALNT5Q7Z7M9 940 aa17.02■□□□□ 0.32
CHTOP-203ENST00000368690 ZDHHC21Q8IVQ6 265 aa17.02■□□□□ 0.32
CHTOP-203ENST00000368690 ZNF683Q8IZ20 524 aa17.02■□□□□ 0.32
CHTOP-203ENST00000368690 PGBD5Q8N414 524 aa17.02■□□□□ 0.32
CHTOP-203ENST00000368690 TTC29Q8NA56 475 aaPredicted RBP17.02■□□□□ 0.32
CHTOP-203ENST00000368690 OR52B6Q8NGF0 335 aa17.02■□□□□ 0.32
CHTOP-203ENST00000368690 TSEN34Q9BSV6 310 aaKnown RBP17.02■□□□□ 0.32
CHTOP-203ENST00000368690 ZBTB20Q9HC78 741 aaPredicted RBP17.02■□□□□ 0.32
CHTOP-203ENST00000368690 VNN3Q9NY84 501 aa17.02■□□□□ 0.32
CHTOP-203ENST00000368690 GRIP1Q9Y3R0 1128 aa17.02■□□□□ 0.32
CHTOP-203ENST00000368690 CCL27Q9Y4X3 112 aa17.02■□□□□ 0.32
CHTOP-203ENST00000368690 N6AMT1Q9Y5N5 214 aa17.02■□□□□ 0.32
CHTOP-203ENST00000368690 U3KQV3 271 aa17.02■□□□□ 0.32
CHTOP-203ENST00000368690 LOC110117498-PIK3R3F6TDL0 507 aa17.02■□□□□ 0.31
CHTOP-203ENST00000368690 ERN1O75460 977 aaKnown RBP17.02■□□□□ 0.31
CHTOP-203ENST00000368690 LCKP06239 509 aa17.02■□□□□ 0.31
CHTOP-203ENST00000368690 FPR1P21462 350 aa17.02■□□□□ 0.31
CHTOP-203ENST00000368690 DNAJA1P31689 397 aaKnown RBP17.02■□□□□ 0.31
CHTOP-203ENST00000368690 PBX3P40426 434 aa17.02■□□□□ 0.31
CHTOP-203ENST00000368690 HTR6P50406 440 aa17.02■□□□□ 0.31
CHTOP-203ENST00000368690 CHRNEQ04844 493 aa17.02■□□□□ 0.31
CHTOP-203ENST00000368690 MLIPQ5VWP3 458 aa17.02■□□□□ 0.31
CHTOP-203ENST00000368690 KIAA1614Q5VZ46 1190 aa17.02■□□□□ 0.31
CHTOP-203ENST00000368690 OR2T5Q6IEZ7 315 aa17.02■□□□□ 0.31
CHTOP-203ENST00000368690 ASCC1Q8N9N2 400 aaKnown RBP17.02■□□□□ 0.31
CHTOP-203ENST00000368690 SIMC1Q8NDZ2 872 aa17.02■□□□□ 0.31
CHTOP-203ENST00000368690 OR2T29Q8NH02 315 aa17.02■□□□□ 0.31
CHTOP-203ENST00000368690 NETO1Q8TDF5 533 aa17.02■□□□□ 0.31
CHTOP-203ENST00000368690 PIK3R3Q92569 461 aa17.02■□□□□ 0.31
CHTOP-203ENST00000368690 PYCR2Q96C36 320 aa17.02■□□□□ 0.31
CHTOP-203ENST00000368690 CPPED1Q9BRF8 314 aaPredicted RBP17.02■□□□□ 0.31
CHTOP-203ENST00000368690 CDADC1Q9BWV3 514 aa17.02■□□□□ 0.31
CHTOP-203ENST00000368690 C6orf62Q9GZU0 229 aaPredicted RBP17.02■□□□□ 0.31
CHTOP-203ENST00000368690 DKK3Q9UBP4 350 aa17.02■□□□□ 0.31
CHTOP-203ENST00000368690 SAMD4AQ9UPU9 718 aaKnown RBP17.02■□□□□ 0.31
CHTOP-203ENST00000368690 ZW10O43264 779 aa17.01■□□□□ 0.31
CHTOP-203ENST00000368690 GUCY1B2O75343 617 aa17.01■□□□□ 0.31
CHTOP-203ENST00000368690 NDUFS3O75489 264 aa17.01■□□□□ 0.31
CHTOP-203ENST00000368690 RPLP2P05387 115 aaKnown RBP17.01■□□□□ 0.31
CHTOP-203ENST00000368690 PGRP06401 933 aa17.01■□□□□ 0.31
CHTOP-203ENST00000368690 HAPLN1P10915 354 aaPredicted RBP17.01■□□□□ 0.31
CHTOP-203ENST00000368690 IGFBP6P24592 240 aaPredicted RBP17.01■□□□□ 0.31
CHTOP-203ENST00000368690 CD52P31358 61 aa17.01■□□□□ 0.31
CHTOP-203ENST00000368690 LIPAP38571 399 aa17.01■□□□□ 0.31
CHTOP-203ENST00000368690 IL2P60568 153 aa17.01■□□□□ 0.31
CHTOP-203ENST00000368690 IL10RBQ08334 325 aa17.01■□□□□ 0.31
CHTOP-203ENST00000368690 ELP6Q0PNE2 266 aa17.01■□□□□ 0.31
CHTOP-203ENST00000368690 FAM174BQ3ZCQ3 159 aa17.01■□□□□ 0.31
CHTOP-203ENST00000368690 FBXO43Q4G163 708 aa17.01■□□□□ 0.31
CHTOP-203ENST00000368690 LRIF1Q5T3J3 769 aa17.01■□□□□ 0.31
CHTOP-203ENST00000368690 ITCHQ96J02 903 aa17.01■□□□□ 0.31
CHTOP-203ENST00000368690 TBCDQ9BTW9 1192 aa17.01■□□□□ 0.31
CHTOP-203ENST00000368690 CCDC32Q9BV29 185 aa17.01■□□□□ 0.31
CHTOP-203ENST00000368690 CLMPQ9H6B4 373 aa17.01■□□□□ 0.31
CHTOP-203ENST00000368690 MARCH7Q9H992 704 aa17.01■□□□□ 0.31
CHTOP-203ENST00000368690 IL1RAPQ9NPH3 570 aa17.01■□□□□ 0.31
CHTOP-203ENST00000368690 PLCXD1Q9NUJ7 323 aa17.01■□□□□ 0.31
CHTOP-203ENST00000368690 WBP1LQ9NX94 342 aa17.01■□□□□ 0.31
CHTOP-203ENST00000368690 ASB1Q9Y576 335 aa17.01■□□□□ 0.31
CHTOP-203ENST00000368690 PCDHGB6Q9Y5F9 930 aa17.01■□□□□ 0.31
CHTOP-203ENST00000368690 DSCR3O14972 297 aa17.01■□□□□ 0.31
CHTOP-203ENST00000368690 GPR182O15218 404 aa17.01■□□□□ 0.31
CHTOP-203ENST00000368690 KMOO15229 486 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms