RNA–Protein interactions for RNA: ENST00000367740.2

VAMP4-202, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VAMP4, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-202ENST00000367740 OLIG2Q13516 323 aa13.99□□□□□ -0.17
VAMP4-202ENST00000367740 BOP1Q14137 746 aaKnown RBP13.99□□□□□ -0.17
VAMP4-202ENST00000367740 DPYSL3Q14195 570 aa13.99□□□□□ -0.17
VAMP4-202ENST00000367740 ZDHHC20Q5W0Z9 365 aa13.99□□□□□ -0.17
VAMP4-202ENST00000367740 PPP1R2P3Q6NXS1 205 aa13.99□□□□□ -0.17
VAMP4-202ENST00000367740 CNSTQ6PJW8 725 aa13.99□□□□□ -0.17
VAMP4-202ENST00000367740 CLEC9AQ6UXN8 241 aa13.99□□□□□ -0.17
VAMP4-202ENST00000367740 SIAH3Q8IW03 269 aa13.99□□□□□ -0.17
VAMP4-202ENST00000367740 PRSS58Q8IYP2 241 aa13.99□□□□□ -0.17
VAMP4-202ENST00000367740 AMER2Q8N7J2 671 aa13.99□□□□□ -0.17
VAMP4-202ENST00000367740 CCNYQ8ND76 341 aa13.99□□□□□ -0.17
VAMP4-202ENST00000367740 WFDC11Q8NEX6 87 aa13.99□□□□□ -0.17
VAMP4-202ENST00000367740 NUDT8Q8WV74 236 aa13.99□□□□□ -0.17
VAMP4-202ENST00000367740 C18orf12Q96KH6 178 aa13.99□□□□□ -0.17
VAMP4-202ENST00000367740 SRPK1Q96SB4 655 aaKnown RBP13.99□□□□□ -0.17
VAMP4-202ENST00000367740 TRIM51Q9BSJ1 452 aa13.99□□□□□ -0.17
VAMP4-202ENST00000367740 MVB12BQ9H7P6 319 aa13.99□□□□□ -0.17
VAMP4-202ENST00000367740 CUTCQ9NTM9 273 aa13.99□□□□□ -0.17
VAMP4-202ENST00000367740 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.99□□□□□ -0.17
VAMP4-202ENST00000367740 NPIPA1Q9UND3 350 aa13.99□□□□□ -0.17
VAMP4-202ENST00000367740 PLEKHA6Q9Y2H5 1048 aa13.99□□□□□ -0.17
VAMP4-202ENST00000367740 A0A1W2PQ72 361 aa13.98□□□□□ -0.17
VAMP4-202ENST00000367740 FAM90A27PA6NNH2 459 aa13.98□□□□□ -0.17
VAMP4-202ENST00000367740 PROM1O43490 865 aa13.98□□□□□ -0.17
VAMP4-202ENST00000367740 TOXO94900 526 aa13.98□□□□□ -0.17
VAMP4-202ENST00000367740 MLYCDO95822 493 aa13.98□□□□□ -0.17
VAMP4-202ENST00000367740 TSPAN12O95859 305 aa13.98□□□□□ -0.17
VAMP4-202ENST00000367740 HEXAP06865 529 aa13.98□□□□□ -0.17
VAMP4-202ENST00000367740 CHRM5P08912 532 aaPredicted RBP13.98□□□□□ -0.17
VAMP4-202ENST00000367740 ITGAMP11215 1152 aa13.98□□□□□ -0.17
VAMP4-202ENST00000367740 MCM3P25205 808 aa13.98□□□□□ -0.17
VAMP4-202ENST00000367740 RAB28P51157 221 aa13.98□□□□□ -0.17
VAMP4-202ENST00000367740 ARSEP51690 589 aa13.98□□□□□ -0.17
VAMP4-202ENST00000367740 ALDH6A1Q02252 535 aaKnown RBP13.98□□□□□ -0.17
VAMP4-202ENST00000367740 SLC14A2Q15849 920 aa13.98□□□□□ -0.17
VAMP4-202ENST00000367740 TFDP3Q5H9I0 405 aa13.98□□□□□ -0.17
VAMP4-202ENST00000367740 UNC5AQ6ZN44 842 aa13.98□□□□□ -0.17
VAMP4-202ENST00000367740 RIPOR1Q6ZS17 1223 aa13.98□□□□□ -0.17
VAMP4-202ENST00000367740 NEK10Q6ZWH5 1172 aa13.98□□□□□ -0.17
VAMP4-202ENST00000367740 MARVELD2Q8N4S9 558 aa13.98□□□□□ -0.17
VAMP4-202ENST00000367740 SPATA22Q8NHS9 363 aa13.98□□□□□ -0.17
VAMP4-202ENST00000367740 STT3BQ8TCJ2 826 aa13.98□□□□□ -0.17
VAMP4-202ENST00000367740 DENND1AQ8TEH3 1009 aa13.98□□□□□ -0.17
VAMP4-202ENST00000367740 FRMD6Q96NE9 622 aa13.98□□□□□ -0.17
VAMP4-202ENST00000367740 UCK2Q9BZX2 261 aa13.98□□□□□ -0.17
VAMP4-202ENST00000367740 C3orf18Q9UK00 162 aa13.98□□□□□ -0.17
VAMP4-202ENST00000367740 SCINQ9Y6U3 715 aa13.98□□□□□ -0.17
VAMP4-202ENST00000367740 MAU2Q9Y6X3 613 aa13.98□□□□□ -0.17
VAMP4-202ENST00000367740 IGHV1-45A0A0A0MS14 117 aa13.97□□□□□ -0.17
VAMP4-202ENST00000367740 ASPDHA6ND91 283 aa13.97□□□□□ -0.17
VAMP4-202ENST00000367740 IFRD1O00458 451 aaPredicted RBP13.97□□□□□ -0.17
VAMP4-202ENST00000367740 BUD23O43709 281 aaKnown RBP13.97□□□□□ -0.17
VAMP4-202ENST00000367740 GADD45BO75293 160 aaPredicted RBP13.97□□□□□ -0.17
VAMP4-202ENST00000367740 WFS1O76024 890 aa13.97□□□□□ -0.17
VAMP4-202ENST00000367740 C8BP07358 591 aa13.97□□□□□ -0.17
VAMP4-202ENST00000367740 INHBBP09529 407 aa13.97□□□□□ -0.17
VAMP4-202ENST00000367740 ZGLP1P0C6A0 271 aa13.97□□□□□ -0.17
VAMP4-202ENST00000367740 MYBL2P10244 700 aa13.97□□□□□ -0.17
VAMP4-202ENST00000367740 MX2P20592 715 aa13.97□□□□□ -0.17
VAMP4-202ENST00000367740 PDHA2P29803 388 aa13.97□□□□□ -0.17
VAMP4-202ENST00000367740 PEBP1P30086 187 aaKnown RBP13.97□□□□□ -0.17
VAMP4-202ENST00000367740 ADSLP30566 484 aaPredicted RBP13.97□□□□□ -0.17
VAMP4-202ENST00000367740 PRLHRP49683 370 aa13.97□□□□□ -0.17
VAMP4-202ENST00000367740 EEF1A2Q05639 463 aaKnown RBP13.97□□□□□ -0.17
VAMP4-202ENST00000367740 PPIDQ08752 370 aaKnown RBP13.97□□□□□ -0.17
VAMP4-202ENST00000367740 DPCR1Q3MIW9 517 aa13.97□□□□□ -0.17
VAMP4-202ENST00000367740 ZNF658BQ4V348 819 aaPredicted RBP13.97□□□□□ -0.17
VAMP4-202ENST00000367740 ABHD17BQ5VST6 288 aa13.97□□□□□ -0.17
VAMP4-202ENST00000367740 FGD2Q7Z6J4 655 aa13.97□□□□□ -0.17
VAMP4-202ENST00000367740 TAB3Q8N5C8 712 aaPredicted RBP13.97□□□□□ -0.17
VAMP4-202ENST00000367740 LRRN4CLQ8ND94 238 aa13.97□□□□□ -0.17
VAMP4-202ENST00000367740 HES7Q9BYE0 225 aa13.97□□□□□ -0.17
VAMP4-202ENST00000367740 SLC25A51Q9H1U9 297 aa13.97□□□□□ -0.17
VAMP4-202ENST00000367740 TRABDQ9H4I3 376 aa13.97□□□□□ -0.17
VAMP4-202ENST00000367740 COG4Q9H9E3 785 aa13.97□□□□□ -0.17
VAMP4-202ENST00000367740 ASB1Q9Y576 335 aa13.97□□□□□ -0.17
VAMP4-202ENST00000367740 PRRG2O14669 202 aa13.96□□□□□ -0.17
VAMP4-202ENST00000367740 ASNA1O43681 348 aa13.96□□□□□ -0.17
VAMP4-202ENST00000367740 CTAG2O75638 210 aa13.96□□□□□ -0.17
VAMP4-202ENST00000367740 MAGP20916 626 aa13.96□□□□□ -0.17
VAMP4-202ENST00000367740 DNASE1P24855 282 aa13.96□□□□□ -0.17
VAMP4-202ENST00000367740 SHMT2P34897 504 aa13.96□□□□□ -0.17
VAMP4-202ENST00000367740 CD151P48509 253 aa13.96□□□□□ -0.17
VAMP4-202ENST00000367740 ZNF33BQ06732 778 aa13.96□□□□□ -0.17
VAMP4-202ENST00000367740 ARHGEF18Q6ZSZ5 1173 aa13.96□□□□□ -0.17
VAMP4-202ENST00000367740 CEP128Q6ZU80 1094 aa13.96□□□□□ -0.17
VAMP4-202ENST00000367740 MCATQ8IVS2 390 aaKnown RBP13.96□□□□□ -0.17
VAMP4-202ENST00000367740 EID3Q8N140 333 aa13.96□□□□□ -0.17
VAMP4-202ENST00000367740 GHDCQ8N2G8 530 aa13.96□□□□□ -0.17
VAMP4-202ENST00000367740 PQLC3Q8N755 202 aa13.96□□□□□ -0.17
VAMP4-202ENST00000367740 NEK11Q8NG66 645 aa13.96□□□□□ -0.17
VAMP4-202ENST00000367740 LILRB4Q8NHJ6 448 aa13.96□□□□□ -0.17
VAMP4-202ENST00000367740 ASB5Q8WWX0 329 aa13.96□□□□□ -0.17
VAMP4-202ENST00000367740 MIEF2Q96C03 454 aa13.96□□□□□ -0.17
VAMP4-202ENST00000367740 POLDIP3Q9BY77 421 aaKnown RBP13.96□□□□□ -0.17
VAMP4-202ENST00000367740 RIC8BQ9NVN3 520 aa13.96□□□□□ -0.17
VAMP4-202ENST00000367740 MYO1AQ9UBC5 1043 aa13.96□□□□□ -0.17
VAMP4-202ENST00000367740 KLHL20Q9Y2M5 609 aa13.96□□□□□ -0.17
VAMP4-202ENST00000367740 ZANQ9Y493 2812 aa13.96□□□□□ -0.18
VAMP4-202ENST00000367740 TTI1O43156 1089 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms