RNA–Protein interactions for RNA: ENST00000366666.6

CAPN9-203, Transcript of calpain 9, humanhuman

TSL 1 (best) BASIC

Gene CAPN9, Length 2,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-203ENST00000366666 PHC3Q8NDX5 983 aa11.91□□□□□ -0.5
CAPN9-203ENST00000366666 CCDC106Q9BWC9 280 aa11.91□□□□□ -0.5
CAPN9-203ENST00000366666 FAM126AQ9BYI3 521 aaPredicted RBP11.91□□□□□ -0.5
CAPN9-203ENST00000366666 VCX3BQ9H321 246 aa11.91□□□□□ -0.5
CAPN9-203ENST00000366666 VCX3AQ9NNX9 186 aa11.91□□□□□ -0.5
CAPN9-203ENST00000366666 DNAAF2Q9NVR5 837 aaKnown RBP11.91□□□□□ -0.5
CAPN9-203ENST00000366666 CD274Q9NZQ7 290 aa11.91□□□□□ -0.5
CAPN9-203ENST00000366666 KLQ9UEF7 1012 aa11.91□□□□□ -0.5
CAPN9-203ENST00000366666 PRAMEF33A0A0G2JMD5 474 aa11.91□□□□□ -0.5
CAPN9-203ENST00000366666 A0A1B0GTL3 188 aa11.91□□□□□ -0.5
CAPN9-203ENST00000366666 GPR89AB7ZAQ6 455 aa11.91□□□□□ -0.5
CAPN9-203ENST00000366666 TAPBPO15533 448 aa11.91□□□□□ -0.5
CAPN9-203ENST00000366666 FFAR2O15552 330 aa11.91□□□□□ -0.5
CAPN9-203ENST00000366666 SNNO75324 88 aaPredicted RBP11.91□□□□□ -0.5
CAPN9-203ENST00000366666 RASGRP1O95267 797 aa11.91□□□□□ -0.5
CAPN9-203ENST00000366666 ENO1P06733 434 aaKnown RBP11.91□□□□□ -0.5
CAPN9-203ENST00000366666 SERPINA6P08185 405 aa11.91□□□□□ -0.5
CAPN9-203ENST00000366666 GPR89BP0CG08 455 aa11.91□□□□□ -0.5
CAPN9-203ENST00000366666 MPC1LP0DKB6 136 aa11.91□□□□□ -0.5
CAPN9-203ENST00000366666 TPP2P29144 1249 aaPredicted RBP11.91□□□□□ -0.5
CAPN9-203ENST00000366666 GDF5P43026 501 aa11.91□□□□□ -0.5
CAPN9-203ENST00000366666 CSNK1EP49674 416 aaKnown RBP11.91□□□□□ -0.5
CAPN9-203ENST00000366666 CTBSQ01459 385 aa11.91□□□□□ -0.5
CAPN9-203ENST00000366666 SLC36A4Q6YBV0 504 aa11.91□□□□□ -0.5
CAPN9-203ENST00000366666 FRA10AC1Q70Z53 315 aa11.91□□□□□ -0.5
CAPN9-203ENST00000366666 ADAMTSL2Q86TH1 951 aa11.91□□□□□ -0.5
CAPN9-203ENST00000366666 TREML1Q86YW5 311 aa11.91□□□□□ -0.5
CAPN9-203ENST00000366666 SFTPA2Q8IWL1 248 aa11.91□□□□□ -0.5
CAPN9-203ENST00000366666 ULK2Q8IYT8 1036 aa11.91□□□□□ -0.5
CAPN9-203ENST00000366666 RGL4Q8IZJ4 473 aa11.91□□□□□ -0.5
CAPN9-203ENST00000366666 FBXL6Q8N531 539 aa11.91□□□□□ -0.5
CAPN9-203ENST00000366666 KLHDC7BQ96G42 594 aa11.91□□□□□ -0.5
CAPN9-203ENST00000366666 GBP5Q96PP8 586 aa11.91□□□□□ -0.5
CAPN9-203ENST00000366666 OR2M4Q96R27 311 aa11.91□□□□□ -0.5
CAPN9-203ENST00000366666 SORT1Q99523 831 aa11.91□□□□□ -0.5
CAPN9-203ENST00000366666 ZDHHC5Q9C0B5 715 aa11.91□□□□□ -0.5
CAPN9-203ENST00000366666 DUSP15Q9H1R2 295 aaPredicted RBP11.91□□□□□ -0.5
CAPN9-203ENST00000366666 STN1Q9H668 368 aaKnown RBP11.91□□□□□ -0.5
CAPN9-203ENST00000366666 TNFRSF12AQ9NP84 129 aa11.91□□□□□ -0.5
CAPN9-203ENST00000366666 PRDM8Q9NQV8 689 aa11.91□□□□□ -0.5
CAPN9-203ENST00000366666 TMEM74BQ9NUR3 256 aa11.91□□□□□ -0.5
CAPN9-203ENST00000366666 SCHIP1Q9P0W5 487 aaPredicted RBP11.91□□□□□ -0.5
CAPN9-203ENST00000366666 ARMCX1Q9P291 453 aa11.91□□□□□ -0.5
CAPN9-203ENST00000366666 OARD1Q9Y530 152 aa11.91□□□□□ -0.5
CAPN9-203ENST00000366666 ADAMTS9Q9P2N4 1935 aa11.9□□□□□ -0.5
CAPN9-203ENST00000366666 CCDC163A0A0D9SF12 145 aa11.9□□□□□ -0.5
CAPN9-203ENST00000366666 A0A1B0GVG6 124 aa11.9□□□□□ -0.5
CAPN9-203ENST00000366666 EIF3FO00303 357 aaPredicted RBP11.9□□□□□ -0.5
CAPN9-203ENST00000366666 KLK8O60259 260 aa11.9□□□□□ -0.5
CAPN9-203ENST00000366666 PSIP1O75475 530 aaKnown RBP11.9□□□□□ -0.5
CAPN9-203ENST00000366666 CD38P28907 300 aa11.9□□□□□ -0.5
CAPN9-203ENST00000366666 RPIAP49247 311 aa11.9□□□□□ -0.5
CAPN9-203ENST00000366666 CLCNKAP51800 687 aa11.9□□□□□ -0.5
CAPN9-203ENST00000366666 CDH13P55290 713 aa11.9□□□□□ -0.5
CAPN9-203ENST00000366666 STX3Q13277 289 aa11.9□□□□□ -0.5
CAPN9-203ENST00000366666 CLCA4Q14CN2 919 aa11.9□□□□□ -0.5
CAPN9-203ENST00000366666 UNC50Q53HI1 259 aa11.9□□□□□ -0.5
CAPN9-203ENST00000366666 ZNF678Q5SXM1 525 aa11.9□□□□□ -0.5
CAPN9-203ENST00000366666 RIPOR1Q6ZS17 1223 aa11.9□□□□□ -0.5
CAPN9-203ENST00000366666 NRROSQ86YC3 692 aa11.9□□□□□ -0.5
CAPN9-203ENST00000366666 LSMEM2Q8N112 164 aa11.9□□□□□ -0.5
CAPN9-203ENST00000366666 FBXO39Q8N4B4 442 aa11.9□□□□□ -0.5
CAPN9-203ENST00000366666 PPP1R14CQ8TAE6 165 aa11.9□□□□□ -0.5
CAPN9-203ENST00000366666 AGR3Q8TD06 166 aa11.9□□□□□ -0.5
CAPN9-203ENST00000366666 ECSITQ9BQ95 431 aa11.9□□□□□ -0.5
CAPN9-203ENST00000366666 SLC12A9Q9BXP2 914 aa11.9□□□□□ -0.5
CAPN9-203ENST00000366666 RMI1Q9H9A7 625 aa11.9□□□□□ -0.5
CAPN9-203ENST00000366666 C11orf16Q9NQ32 467 aa11.9□□□□□ -0.5
CAPN9-203ENST00000366666 NDE1Q9NXR1 346 aa11.9□□□□□ -0.5
CAPN9-203ENST00000366666 TBC1D29Q9UFV1 150 aa11.9□□□□□ -0.5
CAPN9-203ENST00000366666 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.9□□□□□ -0.5
CAPN9-203ENST00000366666 CACNA1EQ15878 2313 aa11.9□□□□□ -0.5
CAPN9-203ENST00000366666 OR52A4PA6NMU1 304 aa11.89□□□□□ -0.51
CAPN9-203ENST00000366666 SNX2O60749 519 aa11.89□□□□□ -0.51
CAPN9-203ENST00000366666 SERPINE1P05121 402 aa11.89□□□□□ -0.51
CAPN9-203ENST00000366666 LYNP07948 512 aa11.89□□□□□ -0.51
CAPN9-203ENST00000366666 GSTM1P09488 218 aa11.89□□□□□ -0.51
CAPN9-203ENST00000366666 EEF1DP29692 281 aaKnown RBP11.89□□□□□ -0.51
CAPN9-203ENST00000366666 SLC1A6P48664 564 aa11.89□□□□□ -0.51
CAPN9-203ENST00000366666 NFKB2Q00653 900 aa11.89□□□□□ -0.51
CAPN9-203ENST00000366666 GSTM4Q03013 218 aa11.89□□□□□ -0.51
CAPN9-203ENST00000366666 DMPKQ09013 629 aa11.89□□□□□ -0.51
CAPN9-203ENST00000366666 NEK10Q6ZWH5 1172 aa11.89□□□□□ -0.51
CAPN9-203ENST00000366666 KBTBD2Q8IY47 623 aa11.89□□□□□ -0.51
CAPN9-203ENST00000366666 OR5AR1Q8NGP9 310 aa11.89□□□□□ -0.51
CAPN9-203ENST00000366666 DNASE2BQ8WZ79 361 aa11.89□□□□□ -0.51
CAPN9-203ENST00000366666 RHBDF1Q96CC6 855 aa11.89□□□□□ -0.51
CAPN9-203ENST00000366666 TMEM79Q9BSE2 394 aa11.89□□□□□ -0.51
CAPN9-203ENST00000366666 PCED1AQ9H1Q7 454 aa11.89□□□□□ -0.51
CAPN9-203ENST00000366666 GSTO2Q9H4Y5 243 aa11.89□□□□□ -0.51
CAPN9-203ENST00000366666 PARVBQ9HBI1 364 aa11.89□□□□□ -0.51
CAPN9-203ENST00000366666 THAP1Q9NVV9 213 aa11.89□□□□□ -0.51
CAPN9-203ENST00000366666 MARCOQ9UEW3 520 aaPredicted RBP11.89□□□□□ -0.51
CAPN9-203ENST00000366666 DNMT3AQ9Y6K1 912 aaPredicted RBP11.89□□□□□ -0.51
CAPN9-203ENST00000366666 PCM1Q15154 2024 aa11.89□□□□□ -0.51
CAPN9-203ENST00000366666 UBFD1O14562 309 aaKnown RBP11.89□□□□□ -0.51
CAPN9-203ENST00000366666 TNFRSF10CO14798 259 aa11.89□□□□□ -0.51
CAPN9-203ENST00000366666 C1orf105O95561 183 aa11.89□□□□□ -0.51
CAPN9-203ENST00000366666 IMPDH1P20839 514 aa11.89□□□□□ -0.51
CAPN9-203ENST00000366666 KELP23276 732 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms