RNA–Protein interactions for RNA: ENST00000361198.9

LDB1-201, Transcript of LIM domain binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDB1, Length 2,285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-201ENST00000361198 P2RY13Q9BPV8 354 aa22.05■■□□□ 1.12
LDB1-201ENST00000361198 USP22Q9UPT9 525 aa22.05■■□□□ 1.12
LDB1-201ENST00000361198 OR2AG2A6NM03 316 aa22.04■■□□□ 1.12
LDB1-201ENST00000361198 HIST1H2AGP0C0S8 130 aaPredicted RBP22.04■■□□□ 1.12
LDB1-201ENST00000361198 HIST1H2ADP20671 130 aa22.04■■□□□ 1.12
LDB1-201ENST00000361198 GNPDA1P46926 289 aa22.04■■□□□ 1.12
LDB1-201ENST00000361198 KIAA0040Q15053 153 aa22.04■■□□□ 1.12
LDB1-201ENST00000361198 SLC44A4Q53GD3 710 aa22.04■■□□□ 1.12
LDB1-201ENST00000361198 ZNF805Q5CZA5 627 aa22.04■■□□□ 1.12
LDB1-201ENST00000361198 HID1Q8IV36 788 aa22.04■■□□□ 1.12
LDB1-201ENST00000361198 PHOSPHO2Q8TCD6 241 aa22.04■■□□□ 1.12
LDB1-201ENST00000361198 ELMO1Q92556 727 aa22.04■■□□□ 1.12
LDB1-201ENST00000361198 HIST1H2AHQ96KK5 128 aa22.04■■□□□ 1.12
LDB1-201ENST00000361198 HIST1H2AJQ99878 128 aa22.04■■□□□ 1.12
LDB1-201ENST00000361198 H2AFJQ9BTM1 129 aa22.04■■□□□ 1.12
LDB1-201ENST00000361198 EIF3LQ9Y262 564 aaKnown RBP22.04■■□□□ 1.12
LDB1-201ENST00000361198 C16orf96A6NNT2 1141 aa22.04■■□□□ 1.12
LDB1-201ENST00000361198 CFAP99D6REC4 459 aa22.04■■□□□ 1.12
LDB1-201ENST00000361198 GFYI3L273 518 aa22.04■■□□□ 1.12
LDB1-201ENST00000361198 ARNTLO00327 626 aa22.04■■□□□ 1.12
LDB1-201ENST00000361198 EI24O14681 340 aa22.04■■□□□ 1.12
LDB1-201ENST00000361198 ZNF197O14709 1029 aa22.04■■□□□ 1.12
LDB1-201ENST00000361198 MPC1LP0DKB6 136 aa22.04■■□□□ 1.12
LDB1-201ENST00000361198 VARSP26640 1264 aaKnown RBP22.04■■□□□ 1.12
LDB1-201ENST00000361198 EMP3P54852 163 aa22.04■■□□□ 1.12
LDB1-201ENST00000361198 ESRRGP62508 458 aa22.04■■□□□ 1.12
LDB1-201ENST00000361198 IMPG1Q17R60 797 aa22.04■■□□□ 1.12
LDB1-201ENST00000361198 PRR23BQ6ZRT6 265 aa22.04■■□□□ 1.12
LDB1-201ENST00000361198 PROSER1Q86XN7 944 aa22.04■■□□□ 1.12
LDB1-201ENST00000361198 RSPRY1Q96DX4 576 aa22.04■■□□□ 1.12
LDB1-201ENST00000361198 RPF2Q9H7B2 306 aaKnown RBP22.04■■□□□ 1.12
LDB1-201ENST00000361198 C5orf67F2Z3F1 127 aa22.03■■□□□ 1.12
LDB1-201ENST00000361198 SEC22BO75396 215 aa22.03■■□□□ 1.12
LDB1-201ENST00000361198 ADH5P11766 374 aa22.03■■□□□ 1.12
LDB1-201ENST00000361198 NCK1P16333 377 aa22.03■■□□□ 1.12
LDB1-201ENST00000361198 XPAP23025 273 aaPredicted RBP22.03■■□□□ 1.12
LDB1-201ENST00000361198 MESP2Q0VG99 397 aa22.03■■□□□ 1.12
LDB1-201ENST00000361198 DCTN2Q13561 401 aaKnown RBP22.03■■□□□ 1.12
LDB1-201ENST00000361198 PTCHD3Q3KNS1 767 aa22.03■■□□□ 1.12
LDB1-201ENST00000361198 CYBRD1Q53TN4 286 aa22.03■■□□□ 1.12
LDB1-201ENST00000361198 DHRS4L2Q6PKH6 230 aa22.03■■□□□ 1.12
LDB1-201ENST00000361198 GPR141Q7Z602 305 aa22.03■■□□□ 1.12
LDB1-201ENST00000361198 PATL1Q86TB9 770 aaKnown RBP22.03■■□□□ 1.12
LDB1-201ENST00000361198 TRAM1L1Q8N609 369 aa22.03■■□□□ 1.12
LDB1-201ENST00000361198 CELF5Q8N6W0 485 aaKnown RBP22.03■■□□□ 1.12
LDB1-201ENST00000361198 PPM1MQ96MI6 270 aa22.03■■□□□ 1.12
LDB1-201ENST00000361198 PIF1Q9H611 641 aa22.03■■□□□ 1.12
LDB1-201ENST00000361198 LRTM1Q9HBL6 345 aa22.03■■□□□ 1.12
LDB1-201ENST00000361198 SMPD3Q9NY59 655 aaPredicted RBP22.03■■□□□ 1.12
LDB1-201ENST00000361198 FAM8A1Q9UBU6 413 aa22.03■■□□□ 1.12
LDB1-201ENST00000361198 RWDD3Q9Y3V2 267 aa22.03■■□□□ 1.12
LDB1-201ENST00000361198 RANBP2P49792 3224 aaKnown RBP22.03■■□□□ 1.12
LDB1-201ENST00000361198 CAPGP40121 348 aa22.03■■□□□ 1.12
LDB1-201ENST00000361198 SLC6A12P48065 614 aa22.03■■□□□ 1.12
LDB1-201ENST00000361198 PLIN5Q00G26 463 aa22.03■■□□□ 1.12
LDB1-201ENST00000361198 MAD2L1Q13257 205 aaPredicted RBP22.03■■□□□ 1.12
LDB1-201ENST00000361198 NEK5Q6P3R8 708 aa22.03■■□□□ 1.12
LDB1-201ENST00000361198 LRRC70Q7Z2Q7 622 aa22.03■■□□□ 1.12
LDB1-201ENST00000361198 DDHD1Q8NEL9 900 aa22.03■■□□□ 1.12
LDB1-201ENST00000361198 ZSCAN5AQ9BUG6 496 aa22.03■■□□□ 1.12
LDB1-201ENST00000361198 SLC29A3Q9BZD2 475 aa22.03■■□□□ 1.12
LDB1-201ENST00000361198 CIDEBQ9UHD4 219 aa22.03■■□□□ 1.12
LDB1-201ENST00000361198 FADS3Q9Y5Q0 445 aa22.03■■□□□ 1.12
LDB1-201ENST00000361198 TMEM202A6NGA9 273 aa22.02■■□□□ 1.12
LDB1-201ENST00000361198 CLOCKO15516 846 aa22.02■■□□□ 1.12
LDB1-201ENST00000361198 LDLRP01130 860 aa22.02■■□□□ 1.12
LDB1-201ENST00000361198 PDYNP01213 254 aa22.02■■□□□ 1.12
LDB1-201ENST00000361198 HRH2P25021 359 aa22.02■■□□□ 1.12
LDB1-201ENST00000361198 VIPR2P41587 438 aa22.02■■□□□ 1.12
LDB1-201ENST00000361198 GRIN2CQ14957 1233 aa22.02■■□□□ 1.12
LDB1-201ENST00000361198 SMU1Q2TAY7 513 aa22.02■■□□□ 1.12
LDB1-201ENST00000361198 TTC23LQ6PF05 361 aa22.02■■□□□ 1.12
LDB1-201ENST00000361198 SUSD1Q6UWL2 747 aa22.02■■□□□ 1.12
LDB1-201ENST00000361198 USP51Q70EK9 711 aa22.02■■□□□ 1.12
LDB1-201ENST00000361198 DPPA4Q7L190 304 aa22.02■■□□□ 1.12
LDB1-201ENST00000361198 TECPR1Q7Z6L1 1165 aa22.02■■□□□ 1.12
LDB1-201ENST00000361198 TCAIMQ8N3R3 496 aa22.02■■□□□ 1.12
LDB1-201ENST00000361198 LIX1Q8N485 282 aa22.02■■□□□ 1.12
LDB1-201ENST00000361198 DHRSXQ8N5I4 330 aa22.02■■□□□ 1.12
LDB1-201ENST00000361198 BIRC7Q96CA5 298 aa22.02■■□□□ 1.12
LDB1-201ENST00000361198 ACPTQ9BZG2 426 aa22.02■■□□□ 1.12
LDB1-201ENST00000361198 LIN28AQ9H9Z2 209 aaKnown RBP22.02■■□□□ 1.12
LDB1-201ENST00000361198 ALPK3Q96L96 1907 aa22.02■■□□□ 1.12
LDB1-201ENST00000361198 KPNA5O15131 536 aa22.01■■□□□ 1.11
LDB1-201ENST00000361198 SRPRAP08240 638 aaKnown RBP22.01■■□□□ 1.11
LDB1-201ENST00000361198 RPS9P46781 194 aaKnown RBP22.01■■□□□ 1.11
LDB1-201ENST00000361198 HNMTP50135 292 aa22.01■■□□□ 1.11
LDB1-201ENST00000361198 SP140Q13342 867 aa22.01■■□□□ 1.11
LDB1-201ENST00000361198 SELPLGQ14242 412 aa22.01■■□□□ 1.11
LDB1-201ENST00000361198 ABRAXAS1Q6UWZ7 409 aa22.01■■□□□ 1.11
LDB1-201ENST00000361198 C12orf76Q8N812 135 aaPredicted RBP22.01■■□□□ 1.11
LDB1-201ENST00000361198 GFM2Q969S9 779 aaKnown RBP22.01■■□□□ 1.11
LDB1-201ENST00000361198 DKK3Q9UBP4 350 aa22.01■■□□□ 1.11
LDB1-201ENST00000361198 SLC22A14Q9Y267 594 aa22.01■■□□□ 1.11
LDB1-201ENST00000361198 ITM2BQ9Y287 266 aa22.01■■□□□ 1.11
LDB1-201ENST00000361198 IFRD1O00458 451 aaPredicted RBP22.01■■□□□ 1.11
LDB1-201ENST00000361198 TULP3O75386 442 aa22.01■■□□□ 1.11
LDB1-201ENST00000361198 KRT6AP02538 564 aa22.01■■□□□ 1.11
LDB1-201ENST00000361198 KRT6BP04259 564 aa22.01■■□□□ 1.11
LDB1-201ENST00000361198 CYP2A7P20853 494 aa22.01■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms