RNA–Protein interactions for RNA: ENST00000360579.11

VPS29-201, Transcript of VPS29, retromer complex component, humanhuman

TSL 1 (best) BASIC

Gene VPS29, Length 1,091 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-201ENST00000360579 OR11G2Q8NGC1 345 aa13.29□□□□□ -0.28
VPS29-201ENST00000360579 OR13C4Q8NGS5 318 aa13.29□□□□□ -0.28
VPS29-201ENST00000360579 OR5K2Q8NHB8 316 aa13.29□□□□□ -0.28
VPS29-201ENST00000360579 FLVCR1-AS1Q8TAF5 88 aa13.29□□□□□ -0.28
VPS29-201ENST00000360579 LRRC45Q96CN5 670 aa13.29□□□□□ -0.28
VPS29-201ENST00000360579 TDRKHQ9Y2W6 561 aaKnown RBP13.29□□□□□ -0.28
VPS29-201ENST00000360579 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.29□□□□□ -0.28
VPS29-201ENST00000360579 NF1P21359 2839 aa13.29□□□□□ -0.28
VPS29-201ENST00000360579 SVILO95425 2214 aa13.28□□□□□ -0.28
VPS29-201ENST00000360579 DCHS2Q6V1P9 2916 aa13.28□□□□□ -0.28
VPS29-201ENST00000360579 TRGV8A0A0C4DH27 118 aa13.28□□□□□ -0.28
VPS29-201ENST00000360579 TRBV5-4A0A0C4DH59 114 aa13.28□□□□□ -0.28
VPS29-201ENST00000360579 CCDC78A2IDD5 438 aa13.28□□□□□ -0.28
VPS29-201ENST00000360579 SPOPO43791 374 aa13.28□□□□□ -0.28
VPS29-201ENST00000360579 USP1O94782 785 aa13.28□□□□□ -0.28
VPS29-201ENST00000360579 AP2A1O95782 977 aa13.28□□□□□ -0.28
VPS29-201ENST00000360579 HPP00738 406 aa13.28□□□□□ -0.28
VPS29-201ENST00000360579 GYPCP04921 128 aa13.28□□□□□ -0.28
VPS29-201ENST00000360579 FDXRP22570 491 aa13.28□□□□□ -0.28
VPS29-201ENST00000360579 MC4RP32245 332 aa13.28□□□□□ -0.28
VPS29-201ENST00000360579 ADRA1AP35348 466 aa13.28□□□□□ -0.28
VPS29-201ENST00000360579 TDGF1P3P51864 188 aa13.28□□□□□ -0.28
VPS29-201ENST00000360579 UBASH3AP57075 661 aa13.28□□□□□ -0.28
VPS29-201ENST00000360579 KCNK10P57789 538 aa13.28□□□□□ -0.28
VPS29-201ENST00000360579 PRPSAP1Q14558 356 aa13.28□□□□□ -0.28
VPS29-201ENST00000360579 GRM7Q14831 915 aa13.28□□□□□ -0.28
VPS29-201ENST00000360579 TFDP3Q5H9I0 405 aa13.28□□□□□ -0.28
VPS29-201ENST00000360579 ZC3H12BQ5HYM0 836 aaKnown RBP13.28□□□□□ -0.28
VPS29-201ENST00000360579 TCTE1Q5JU00 501 aa13.28□□□□□ -0.28
VPS29-201ENST00000360579 TMEM207Q6UWW9 146 aa13.28□□□□□ -0.28
VPS29-201ENST00000360579 SERPINA9Q86WD7 417 aa13.28□□□□□ -0.28
VPS29-201ENST00000360579 TMTC1Q8IUR5 882 aa13.28□□□□□ -0.28
VPS29-201ENST00000360579 MCATQ8IVS2 390 aaKnown RBP13.28□□□□□ -0.28
VPS29-201ENST00000360579 TMEM151BQ8IW70 566 aa13.28□□□□□ -0.28
VPS29-201ENST00000360579 CATSPER1Q8NEC5 780 aa13.28□□□□□ -0.28
VPS29-201ENST00000360579 SLC22A18Q96BI1 424 aa13.28□□□□□ -0.28
VPS29-201ENST00000360579 CCDC120Q96HB5 630 aa13.28□□□□□ -0.28
VPS29-201ENST00000360579 PPP1R2P1Q96PQ5 205 aa13.28□□□□□ -0.28
VPS29-201ENST00000360579 SOX17Q9H6I2 414 aaPredicted RBP13.28□□□□□ -0.28
VPS29-201ENST00000360579 LUC7LQ9NQ29 371 aaKnown RBP13.28□□□□□ -0.28
VPS29-201ENST00000360579 CUTCQ9NTM9 273 aa13.28□□□□□ -0.28
VPS29-201ENST00000360579 INTS7Q9NVH2 962 aaKnown RBP13.28□□□□□ -0.28
VPS29-201ENST00000360579 FEZ2Q9UHY8 353 aaPredicted RBP13.28□□□□□ -0.28
VPS29-201ENST00000360579 ZGRF1Q86YA3 2104 aa13.28□□□□□ -0.28
VPS29-201ENST00000360579 NUP210LQ5VU65 1888 aa13.27□□□□□ -0.28
VPS29-201ENST00000360579 CCL21O00585 134 aa13.27□□□□□ -0.29
VPS29-201ENST00000360579 PSTPIP1O43586 416 aa13.27□□□□□ -0.29
VPS29-201ENST00000360579 AKR1B10O60218 316 aa13.27□□□□□ -0.29
VPS29-201ENST00000360579 CRYABP02511 175 aaKnown RBP13.27□□□□□ -0.29
VPS29-201ENST00000360579 FTH1P02794 183 aa13.27□□□□□ -0.29
VPS29-201ENST00000360579 ACPPP15309 386 aa13.27□□□□□ -0.29
VPS29-201ENST00000360579 MAGP20916 626 aa13.27□□□□□ -0.29
VPS29-201ENST00000360579 ACADLP28330 430 aa13.27□□□□□ -0.29
VPS29-201ENST00000360579 NSG1P42857 185 aa13.27□□□□□ -0.29
VPS29-201ENST00000360579 TNFSF10P50591 281 aa13.27□□□□□ -0.29
VPS29-201ENST00000360579 RBPJQ06330 500 aa13.27□□□□□ -0.29
VPS29-201ENST00000360579 IQCB1Q15051 598 aa13.27□□□□□ -0.29
VPS29-201ENST00000360579 ASTE1Q2TB18 679 aaPredicted RBP13.27□□□□□ -0.29
VPS29-201ENST00000360579 FAM214AQ32MH5 1076 aa13.27□□□□□ -0.29
VPS29-201ENST00000360579 KRTAP21-3Q3LHN1 58 aa13.27□□□□□ -0.29
VPS29-201ENST00000360579 XKRXQ6PP77 449 aa13.27□□□□□ -0.29
VPS29-201ENST00000360579 TAS2R42Q7RTR8 314 aa13.27□□□□□ -0.29
VPS29-201ENST00000360579 KBTBD2Q8IY47 623 aa13.27□□□□□ -0.29
VPS29-201ENST00000360579 CLDN19Q8N6F1 224 aa13.27□□□□□ -0.29
VPS29-201ENST00000360579 TTC29Q8NA56 475 aaPredicted RBP13.27□□□□□ -0.29
VPS29-201ENST00000360579 CCDC110Q8TBZ0 833 aa13.27□□□□□ -0.29
VPS29-201ENST00000360579 APOL2Q9BQE5 337 aa13.27□□□□□ -0.29
VPS29-201ENST00000360579 CRB3Q9BUF7 120 aa13.27□□□□□ -0.29
VPS29-201ENST00000360579 ENAMQ9NRM1 1142 aa13.27□□□□□ -0.29
VPS29-201ENST00000360579 ITGB1BP2Q9UKP3 347 aa13.27□□□□□ -0.29
VPS29-201ENST00000360579 ANKRD12Q6UB98 2062 aa13.27□□□□□ -0.29
VPS29-201ENST00000360579 VSTM2BA6NLU5 285 aa13.26□□□□□ -0.29
VPS29-201ENST00000360579 H7C0S8 307 aa13.26□□□□□ -0.29
VPS29-201ENST00000360579 MAP2K7O14733 419 aa13.26□□□□□ -0.29
VPS29-201ENST00000360579 KLHL18O94889 574 aa13.26□□□□□ -0.29
VPS29-201ENST00000360579 MYBL2P10244 700 aa13.26□□□□□ -0.29
VPS29-201ENST00000360579 COMTP21964 271 aa13.26□□□□□ -0.29
VPS29-201ENST00000360579 SSTR2P30874 369 aa13.26□□□□□ -0.29
VPS29-201ENST00000360579 MTORP42345 2549 aa13.26□□□□□ -0.29
VPS29-201ENST00000360579 CA7P43166 264 aa13.26□□□□□ -0.29
VPS29-201ENST00000360579 RAB28P51157 221 aa13.26□□□□□ -0.29
VPS29-201ENST00000360579 CASP6P55212 293 aa13.26□□□□□ -0.29
VPS29-201ENST00000360579 Q0VFX4 171 aa13.26□□□□□ -0.29
VPS29-201ENST00000360579 MSLNQ13421 630 aaPredicted RBP13.26□□□□□ -0.29
VPS29-201ENST00000360579 SYTL3Q4VX76 610 aa13.26□□□□□ -0.29
VPS29-201ENST00000360579 SHISA6Q6ZSJ9 500 aa13.26□□□□□ -0.29
VPS29-201ENST00000360579 COX15Q7KZN9 410 aa13.26□□□□□ -0.29
VPS29-201ENST00000360579 NLRP9Q7RTR0 991 aa13.26□□□□□ -0.29
VPS29-201ENST00000360579 DNAJB8Q8NHS0 232 aa13.26□□□□□ -0.29
VPS29-201ENST00000360579 ELMO1Q92556 727 aa13.26□□□□□ -0.29
VPS29-201ENST00000360579 HAS2Q92819 552 aa13.26□□□□□ -0.29
VPS29-201ENST00000360579 HAUS1Q96CS2 278 aa13.26□□□□□ -0.29
VPS29-201ENST00000360579 TAAR6Q96RI8 345 aa13.26□□□□□ -0.29
VPS29-201ENST00000360579 GORASP1Q9BQQ3 440 aa13.26□□□□□ -0.29
VPS29-201ENST00000360579 TRIM8Q9BZR9 551 aa13.26□□□□□ -0.29
VPS29-201ENST00000360579 ZNF160Q9HCG1 818 aa13.26□□□□□ -0.29
VPS29-201ENST00000360579 ZNHIT6Q9NWK9 470 aaKnown RBP13.26□□□□□ -0.29
VPS29-201ENST00000360579 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.26□□□□□ -0.29
VPS29-201ENST00000360579 ABI3Q9P2A4 366 aa13.26□□□□□ -0.29
VPS29-201ENST00000360579 CTSFQ9UBX1 484 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms