RNA–Protein interactions for RNA: ENST00000360299.9

RAB5B-201, Transcript of RAB5B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5B, Length 5,340 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-201ENST00000360299 USP46P62068 366 aa6.88□□□□□ -1.31
RAB5B-201ENST00000360299 GSTM4Q03013 218 aa6.88□□□□□ -1.31
RAB5B-201ENST00000360299 C2orf80Q0P641 193 aa6.88□□□□□ -1.31
RAB5B-201ENST00000360299 CHRNA6Q15825 494 aa6.88□□□□□ -1.31
RAB5B-201ENST00000360299 ALG11Q2TAA5 492 aa6.88□□□□□ -1.31
RAB5B-201ENST00000360299 SPATS1Q496A3 300 aa6.88□□□□□ -1.31
RAB5B-201ENST00000360299 GK5Q6ZS86 529 aa6.88□□□□□ -1.31
RAB5B-201ENST00000360299 SLC30A8Q8IWU4 369 aa6.88□□□□□ -1.31
RAB5B-201ENST00000360299 UBR7Q8N806 425 aa6.88□□□□□ -1.31
RAB5B-201ENST00000360299 C11orf65Q8NCR3 313 aa6.88□□□□□ -1.31
RAB5B-201ENST00000360299 OR4A15Q8NGL6 344 aa6.88□□□□□ -1.31
RAB5B-201ENST00000360299 SUN3Q8TAQ9 357 aa6.88□□□□□ -1.31
RAB5B-201ENST00000360299 PIWIL1Q96J94 861 aaKnown RBP6.88□□□□□ -1.31
RAB5B-201ENST00000360299 ZNF317Q96PQ6 595 aaPredicted RBP6.88□□□□□ -1.31
RAB5B-201ENST00000360299 OR2AG1Q9H205 316 aa6.88□□□□□ -1.31
RAB5B-201ENST00000360299 THUMPD1Q9NXG2 353 aaKnown RBP6.88□□□□□ -1.31
RAB5B-201ENST00000360299 TMED5Q9Y3A6 229 aa6.88□□□□□ -1.31
RAB5B-201ENST00000360299 A8MT66 165 aa6.88□□□□□ -1.31
RAB5B-201ENST00000360299 H3BNH8 94 aa6.88□□□□□ -1.31
RAB5B-201ENST00000360299 PIP5K1BO14986 540 aa6.88□□□□□ -1.31
RAB5B-201ENST00000360299 NPC1O15118 1278 aa6.88□□□□□ -1.31
RAB5B-201ENST00000360299 PGLSO95336 258 aa6.88□□□□□ -1.31
RAB5B-201ENST00000360299 EGFP01133 1207 aa6.88□□□□□ -1.31
RAB5B-201ENST00000360299 KLK3P07288 261 aaPredicted RBP6.88□□□□□ -1.31
RAB5B-201ENST00000360299 THEGLP0DJG4 465 aa6.88□□□□□ -1.31
RAB5B-201ENST00000360299 AGXTP21549 392 aa6.88□□□□□ -1.31
RAB5B-201ENST00000360299 RPS14P62263 151 aaKnown RBP6.88□□□□□ -1.31
RAB5B-201ENST00000360299 ALFQ53S48 1182 aa6.88□□□□□ -1.31
RAB5B-201ENST00000360299 STEAP4Q687X5 459 aa6.88□□□□□ -1.31
RAB5B-201ENST00000360299 CDC73Q6P1J9 531 aa6.88□□□□□ -1.31
RAB5B-201ENST00000360299 PACS2Q86VP3 889 aa6.88□□□□□ -1.31
RAB5B-201ENST00000360299 EID2Q8N6I1 236 aa6.88□□□□□ -1.31
RAB5B-201ENST00000360299 C3orf58Q8NDZ4 430 aa6.88□□□□□ -1.31
RAB5B-201ENST00000360299 DDHD1Q8NEL9 900 aa6.88□□□□□ -1.31
RAB5B-201ENST00000360299 FEM1AQ9BSK4 669 aa6.88□□□□□ -1.31
RAB5B-201ENST00000360299 CSNK1G1Q9HCP0 422 aa6.88□□□□□ -1.31
RAB5B-201ENST00000360299 PNPLA3Q9NST1 481 aa6.88□□□□□ -1.31
RAB5B-201ENST00000360299 MOCS1Q9NZB8 636 aa6.88□□□□□ -1.31
RAB5B-201ENST00000360299 ABI3Q9P2A4 366 aa6.88□□□□□ -1.31
RAB5B-201ENST00000360299 COQ6Q9Y2Z9 468 aa6.88□□□□□ -1.31
RAB5B-201ENST00000360299 PLK4O00444 970 aa6.88□□□□□ -1.31
RAB5B-201ENST00000360299 UGT1A9O60656 530 aa6.88□□□□□ -1.31
RAB5B-201ENST00000360299 MAFKO60675 156 aa6.88□□□□□ -1.31
RAB5B-201ENST00000360299 STC2O76061 302 aa6.88□□□□□ -1.31
RAB5B-201ENST00000360299 PRPS1L1P21108 318 aa6.88□□□□□ -1.31
RAB5B-201ENST00000360299 LEPRP48357 1165 aaKnown RBP6.88□□□□□ -1.31
RAB5B-201ENST00000360299 RPS6KA3P51812 740 aa6.88□□□□□ -1.31
RAB5B-201ENST00000360299 RPS21P63220 83 aaKnown RBP6.88□□□□□ -1.31
RAB5B-201ENST00000360299 TRAP1Q12931 704 aaKnown RBP6.88□□□□□ -1.31
RAB5B-201ENST00000360299 TRIM25Q14258 630 aaKnown RBP6.88□□□□□ -1.31
RAB5B-201ENST00000360299 SIX1Q15475 284 aaPredicted RBP6.88□□□□□ -1.31
RAB5B-201ENST00000360299 LEXMQ3ZCV2 418 aa6.88□□□□□ -1.31
RAB5B-201ENST00000360299 MINDY4Q4G0A6 757 aa6.88□□□□□ -1.31
RAB5B-201ENST00000360299 MLIPQ5VWP3 458 aa6.88□□□□□ -1.31
RAB5B-201ENST00000360299 CLEC6AQ6EIG7 209 aa6.88□□□□□ -1.31
RAB5B-201ENST00000360299 SLC8B1Q6J4K2 584 aa6.88□□□□□ -1.31
RAB5B-201ENST00000360299 SPESP1Q6UW49 350 aa6.88□□□□□ -1.31
RAB5B-201ENST00000360299 ERN2Q76MJ5 926 aaKnown RBP6.88□□□□□ -1.31
RAB5B-201ENST00000360299 LRRTM4Q86VH4 590 aa6.88□□□□□ -1.31
RAB5B-201ENST00000360299 OFCC1Q8IZS5 231 aa6.88□□□□□ -1.31
RAB5B-201ENST00000360299 SLC44A3Q8N4M1 653 aa6.88□□□□□ -1.31
RAB5B-201ENST00000360299 OR52L1Q8NGH7 329 aa6.88□□□□□ -1.31
RAB5B-201ENST00000360299 SLC38A2Q96QD8 506 aa6.88□□□□□ -1.31
RAB5B-201ENST00000360299 OSBPL7Q9BZF2 842 aa6.88□□□□□ -1.31
RAB5B-201ENST00000360299 SRMSQ9H3Y6 488 aa6.88□□□□□ -1.31
RAB5B-201ENST00000360299 UGT1A7Q9HAW7 530 aa6.88□□□□□ -1.31
RAB5B-201ENST00000360299 UGT1A10Q9HAW8 530 aa6.88□□□□□ -1.31
RAB5B-201ENST00000360299 UGT1A8Q9HAW9 530 aa6.88□□□□□ -1.31
RAB5B-201ENST00000360299 ZIM2Q9NZV7 527 aa6.88□□□□□ -1.31
RAB5B-201ENST00000360299 SAMHD1Q9Y3Z3 626 aaKnown RBP6.88□□□□□ -1.31
RAB5B-201ENST00000360299 SMIM31A0A1B0GVY4 71 aa6.87□□□□□ -1.31
RAB5B-201ENST00000360299 CLDN4O14493 209 aa6.87□□□□□ -1.31
RAB5B-201ENST00000360299 ERN1O75460 977 aaKnown RBP6.87□□□□□ -1.31
RAB5B-201ENST00000360299 CTHP32929 405 aa6.87□□□□□ -1.31
RAB5B-201ENST00000360299 CENPAP49450 140 aa6.87□□□□□ -1.31
RAB5B-201ENST00000360299 MAPK12P53778 367 aa6.87□□□□□ -1.31
RAB5B-201ENST00000360299 NR1H2P55055 460 aa6.87□□□□□ -1.31
RAB5B-201ENST00000360299 HNRNPKP61978 463 aaKnown RBP eCLIP6.87□□□□□ -1.311e-8■■■□□ 15.4
RAB5B-201ENST00000360299 GPAT3Q53EU6 434 aa6.87□□□□□ -1.31
RAB5B-201ENST00000360299 PLEKHS1Q5SXH7 462 aa6.87□□□□□ -1.31
RAB5B-201ENST00000360299 C9orf64Q5T6V5 341 aa6.87□□□□□ -1.31
RAB5B-201ENST00000360299 KIAA0319Q5VV43 1072 aa6.87□□□□□ -1.31
RAB5B-201ENST00000360299 CHMP1BQ7LBR1 199 aa6.87□□□□□ -1.31
RAB5B-201ENST00000360299 GSTCDQ8NEC7 633 aa6.87□□□□□ -1.31
RAB5B-201ENST00000360299 RHEBL1Q8TAI7 183 aa6.87□□□□□ -1.31
RAB5B-201ENST00000360299 TSPEARQ8WU66 669 aa6.87□□□□□ -1.31
RAB5B-201ENST00000360299 MSANTD3Q96H12 275 aa6.87□□□□□ -1.31
RAB5B-201ENST00000360299 DPYSL5Q9BPU6 564 aa6.87□□□□□ -1.31
RAB5B-201ENST00000360299 SEMA6AQ9H2E6 1030 aa6.87□□□□□ -1.31
RAB5B-201ENST00000360299 C12orf65Q9H3J6 166 aaKnown RBP6.87□□□□□ -1.31
RAB5B-201ENST00000360299 GAREM1Q9H706 876 aa6.87□□□□□ -1.31
RAB5B-201ENST00000360299 TMLHEQ9NVH6 421 aa6.87□□□□□ -1.31
RAB5B-201ENST00000360299 OR10H1Q9Y4A9 318 aa6.87□□□□□ -1.31
RAB5B-201ENST00000360299 PNMA8CA0A1B0GUJ8 204 aa6.87□□□□□ -1.31
RAB5B-201ENST00000360299 WASH4PA8MWX3 477 aa6.87□□□□□ -1.31
RAB5B-201ENST00000360299 DLX3O60479 287 aa6.87□□□□□ -1.31
RAB5B-201ENST00000360299 NIPSNAP2O75323 286 aa6.87□□□□□ -1.31
RAB5B-201ENST00000360299 LDOC1O95751 146 aaPredicted RBP6.87□□□□□ -1.31
RAB5B-201ENST00000360299 ITGA1P56199 1179 aa6.87□□□□□ -1.31
RAB5B-201ENST00000360299 SEMA3AQ14563 771 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms