RNA–Protein interactions for RNA: ENST00000357732.8

RTN4-204, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,390 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-204ENST00000357732 ADPRMQ3LIE5 342 aa17.29■□□□□ 0.36
RTN4-204ENST00000357732 LDLRAP1Q5SW96 308 aa17.29■□□□□ 0.36
RTN4-204ENST00000357732 SUSD1Q6UWL2 747 aa17.29■□□□□ 0.36
RTN4-204ENST00000357732 ADCK1Q86TW2 530 aa17.29■□□□□ 0.36
RTN4-204ENST00000357732 RASAL3Q86YV0 1011 aa17.29■□□□□ 0.36
RTN4-204ENST00000357732 LACC1Q8IV20 430 aa17.29■□□□□ 0.36
RTN4-204ENST00000357732 ULK4Q96C45 1275 aa17.29■□□□□ 0.36
RTN4-204ENST00000357732 TNKS2Q9H2K2 1166 aa17.29■□□□□ 0.36
RTN4-204ENST00000357732 SERHLQ9NQF3 203 aa17.29■□□□□ 0.36
RTN4-204ENST00000357732 CBX4O00257 560 aa17.29■□□□□ 0.36
RTN4-204ENST00000357732 NADKO95544 446 aaPredicted RBP17.29■□□□□ 0.36
RTN4-204ENST00000357732 PRKACGP22612 351 aa17.29■□□□□ 0.36
RTN4-204ENST00000357732 DNAJA1P31689 397 aaKnown RBP17.29■□□□□ 0.36
RTN4-204ENST00000357732 ZNF157P51786 506 aaPredicted RBP17.29■□□□□ 0.36
RTN4-204ENST00000357732 OR2T5Q6IEZ7 315 aa17.29■□□□□ 0.36
RTN4-204ENST00000357732 PLEKHG7Q6ZR37 379 aa17.29■□□□□ 0.36
RTN4-204ENST00000357732 PIWIL3Q7Z3Z3 882 aaKnown RBP17.29■□□□□ 0.36
RTN4-204ENST00000357732 OR2T29Q8NH02 315 aa17.29■□□□□ 0.36
RTN4-204ENST00000357732 CNIH3Q8TBE1 160 aa17.29■□□□□ 0.36
RTN4-204ENST00000357732 FCGR1BQ92637 280 aa17.29■□□□□ 0.36
RTN4-204ENST00000357732 GLMNQ92990 594 aa17.29■□□□□ 0.36
RTN4-204ENST00000357732 SMIM14Q96QK8 99 aa17.29■□□□□ 0.36
RTN4-204ENST00000357732 SEPT5Q99719 369 aaPredicted RBP17.29■□□□□ 0.36
RTN4-204ENST00000357732 GPR63Q9BZJ6 419 aa17.29■□□□□ 0.36
RTN4-204ENST00000357732 PARVBQ9HBI1 364 aa17.29■□□□□ 0.36
RTN4-204ENST00000357732 KLHL42Q9P2K6 505 aa17.29■□□□□ 0.36
RTN4-204ENST00000357732 RPS6KA6Q9UK32 745 aa17.29■□□□□ 0.36
RTN4-204ENST00000357732 AP1M2Q9Y6Q5 423 aa17.29■□□□□ 0.36
RTN4-204ENST00000357732 ISPDA4D126 451 aa17.28■□□□□ 0.36
RTN4-204ENST00000357732 FTH1P02794 183 aa17.28■□□□□ 0.36
RTN4-204ENST00000357732 PFKLP17858 780 aa17.28■□□□□ 0.36
RTN4-204ENST00000357732 FPR1P21462 350 aa17.28■□□□□ 0.36
RTN4-204ENST00000357732 CD40LGP29965 261 aa17.28■□□□□ 0.36
RTN4-204ENST00000357732 RPS24P62847 133 aaKnown RBP17.28■□□□□ 0.36
RTN4-204ENST00000357732 FAM189BP81408 668 aa17.28■□□□□ 0.36
RTN4-204ENST00000357732 HMGCS1Q01581 520 aa17.28■□□□□ 0.36
RTN4-204ENST00000357732 CLCA4Q14CN2 919 aa17.28■□□□□ 0.36
RTN4-204ENST00000357732 TRIM71Q2Q1W2 868 aaKnown RBP17.28■□□□□ 0.36
RTN4-204ENST00000357732 GGTA1PQ4G0N0 100 aa17.28■□□□□ 0.36
RTN4-204ENST00000357732 CES5AQ6NT32 575 aa17.28■□□□□ 0.36
RTN4-204ENST00000357732 ERICH5Q6P6B1 374 aa17.28■□□□□ 0.36
RTN4-204ENST00000357732 KRTCAP2Q8N6L1 136 aa17.28■□□□□ 0.36
RTN4-204ENST00000357732 ZFP90Q8TF47 636 aa17.28■□□□□ 0.36
RTN4-204ENST00000357732 NUDT8Q8WV74 236 aa17.28■□□□□ 0.36
RTN4-204ENST00000357732 ZFP14Q9HCL3 533 aa17.28■□□□□ 0.36
RTN4-204ENST00000357732 LATS2Q9NRM7 1088 aa17.28■□□□□ 0.36
RTN4-204ENST00000357732 NDRG4Q9ULP0 352 aaKnown RBP17.28■□□□□ 0.36
RTN4-204ENST00000357732 VWA8A3KMH1 1905 aa17.28■□□□□ 0.36
RTN4-204ENST00000357732 BRCA2P51587 3418 aa17.28■□□□□ 0.36
RTN4-204ENST00000357732 TMEM247A6NEH6 219 aa17.28■□□□□ 0.36
RTN4-204ENST00000357732 RGS10O43665 173 aa17.28■□□□□ 0.36
RTN4-204ENST00000357732 XPNPEP2O43895 674 aa17.28■□□□□ 0.36
RTN4-204ENST00000357732 CLDN9O95484 217 aa17.28■□□□□ 0.36
RTN4-204ENST00000357732 GUCA1CO95843 209 aa17.28■□□□□ 0.36
RTN4-204ENST00000357732 CBSLP0DN79 551 aa17.28■□□□□ 0.36
RTN4-204ENST00000357732 ITGALP20701 1170 aa17.28■□□□□ 0.36
RTN4-204ENST00000357732 PTPN6P29350 595 aa17.28■□□□□ 0.36
RTN4-204ENST00000357732 CD6P30203 668 aa17.28■□□□□ 0.36
RTN4-204ENST00000357732 CBSP35520 551 aa17.28■□□□□ 0.36
RTN4-204ENST00000357732 EIF2B2P49770 351 aaKnown RBP17.28■□□□□ 0.36
RTN4-204ENST00000357732 TUBA1BP68363 451 aa17.28■□□□□ 0.36
RTN4-204ENST00000357732 INAQ16352 499 aa17.28■□□□□ 0.36
RTN4-204ENST00000357732 TUBA3EQ6PEY2 450 aa17.28■□□□□ 0.36
RTN4-204ENST00000357732 DNAJC14Q6Y2X3 702 aaPredicted RBP17.28■□□□□ 0.36
RTN4-204ENST00000357732 MACC1Q6ZN28 852 aa17.28■□□□□ 0.36
RTN4-204ENST00000357732 TUBA1AQ71U36 451 aa17.28■□□□□ 0.36
RTN4-204ENST00000357732 SERPINA9Q86WD7 417 aa17.28■□□□□ 0.36
RTN4-204ENST00000357732 ZBTB2Q8N680 514 aa17.28■□□□□ 0.36
RTN4-204ENST00000357732 ZNF513Q8N8E2 541 aaPredicted RBP17.28■□□□□ 0.36
RTN4-204ENST00000357732 EFHD2Q96C19 240 aaPredicted RBP17.28■□□□□ 0.36
RTN4-204ENST00000357732 HHIPQ96QV1 700 aa17.28■□□□□ 0.36
RTN4-204ENST00000357732 CRISPLD1Q9H336 500 aa17.28■□□□□ 0.36
RTN4-204ENST00000357732 ERVK-18Q9QC07 812 aa17.28■□□□□ 0.36
RTN4-204ENST00000357732 GABRQQ9UN88 632 aa17.28■□□□□ 0.36
RTN4-204ENST00000357732 GMPPBQ9Y5P6 360 aa17.28■□□□□ 0.36
RTN4-204ENST00000357732 TRBV5-4A0A0C4DH59 114 aa17.27■□□□□ 0.36
RTN4-204ENST00000357732 TRIM43BA6NCK2 446 aa17.27■□□□□ 0.36
RTN4-204ENST00000357732 MANSC4A6NHS7 340 aaPredicted RBP17.27■□□□□ 0.36
RTN4-204ENST00000357732 FFAR3O14843 346 aa17.27■□□□□ 0.36
RTN4-204ENST00000357732 GPR42O15529 346 aa17.27■□□□□ 0.36
RTN4-204ENST00000357732 AQP9O43315 295 aa17.27■□□□□ 0.36
RTN4-204ENST00000357732 COL6A1P12109 1028 aa17.27■□□□□ 0.36
RTN4-204ENST00000357732 ARF5P84085 180 aa17.27■□□□□ 0.36
RTN4-204ENST00000357732 PROX2Q3B8N5 592 aa17.27■□□□□ 0.36
RTN4-204ENST00000357732 FAM171A1Q5VUB5 890 aa17.27■□□□□ 0.36
RTN4-204ENST00000357732 BTLAQ7Z6A9 289 aa17.27■□□□□ 0.36
RTN4-204ENST00000357732 CYP4Z1Q86W10 505 aa17.27■□□□□ 0.36
RTN4-204ENST00000357732 PHACTR4Q8IZ21 702 aa17.27■□□□□ 0.36
RTN4-204ENST00000357732 ARHGAP39Q9C0H5 1083 aa17.27■□□□□ 0.36
RTN4-204ENST00000357732 SH3BP1Q9Y3L3 701 aa17.27■□□□□ 0.36
RTN4-204ENST00000357732 FAM32AQ9Y421 112 aaKnown RBP17.27■□□□□ 0.36
RTN4-204ENST00000357732 A3GALT2U3KPV4 340 aa17.27■□□□□ 0.36
RTN4-204ENST00000357732 SERTM1A2A2V5 107 aa17.26■□□□□ 0.35
RTN4-204ENST00000357732 SLC38A8A6NNN8 435 aa17.26■□□□□ 0.35
RTN4-204ENST00000357732 EVPLLA8MZ36 301 aa17.26■□□□□ 0.35
RTN4-204ENST00000357732 EIF3FO00303 357 aaPredicted RBP17.26■□□□□ 0.35
RTN4-204ENST00000357732 AREL1O15033 823 aa17.26■□□□□ 0.35
RTN4-204ENST00000357732 STK16O75716 305 aa17.26■□□□□ 0.35
RTN4-204ENST00000357732 EFNA1P20827 205 aaPredicted RBP17.26■□□□□ 0.35
RTN4-204ENST00000357732 TRPC1P48995 793 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms