RNA–Protein interactions for RNA: ENST00000357654.7

BRCA1-203, Transcript of BRCA1, DNA repair associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRCA1, Length 7,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-203ENST00000357654 MED27Q6P2C8 311 aa5.69□□□□□ -1.5
BRCA1-203ENST00000357654 GRASPQ7Z6J2 395 aaPredicted RBP5.69□□□□□ -1.5
BRCA1-203ENST00000357654 DOK4Q8TEW6 326 aa5.69□□□□□ -1.5
BRCA1-203ENST00000357654 TMEM41AQ96HV5 264 aa5.69□□□□□ -1.5
BRCA1-203ENST00000357654 SMURF2Q9HAU4 748 aa5.69□□□□□ -1.5
BRCA1-203ENST00000357654 CDH20Q9HBT6 801 aa5.69□□□□□ -1.5
BRCA1-203ENST00000357654 PDE7BQ9NP56 450 aa5.69□□□□□ -1.5
BRCA1-203ENST00000357654 GCM1Q9NP62 436 aa5.69□□□□□ -1.5
BRCA1-203ENST00000357654 TIMMDC1Q9NPL8 285 aa5.69□□□□□ -1.5
BRCA1-203ENST00000357654 TIGARQ9NQ88 270 aa5.69□□□□□ -1.5
BRCA1-203ENST00000357654 LYARQ9NX58 379 aaKnown RBP5.69□□□□□ -1.5
BRCA1-203ENST00000357654 DDX20Q9UHI6 824 aaKnown RBP5.69□□□□□ -1.5
BRCA1-203ENST00000357654 CYTH4Q9UIA0 394 aa5.69□□□□□ -1.5
BRCA1-203ENST00000357654 PCDHGC5Q9Y5F6 944 aa5.69□□□□□ -1.5
BRCA1-203ENST00000357654 LRRN3E7EW58 273 aa5.69□□□□□ -1.5
BRCA1-203ENST00000357654 AGPSO00116 658 aa5.69□□□□□ -1.5
BRCA1-203ENST00000357654 CLPXO76031 633 aa5.69□□□□□ -1.5
BRCA1-203ENST00000357654 UBOX5O94941 541 aa5.69□□□□□ -1.5
BRCA1-203ENST00000357654 SEC24AO95486 1093 aa5.69□□□□□ -1.5
BRCA1-203ENST00000357654 P04436 131 aa5.69□□□□□ -1.5
BRCA1-203ENST00000357654 RBL1P28749 1068 aa5.69□□□□□ -1.5
BRCA1-203ENST00000357654 RGS6P49758 472 aa5.69□□□□□ -1.5
BRCA1-203ENST00000357654 BATFQ16520 125 aa5.69□□□□□ -1.5
BRCA1-203ENST00000357654 SWT1Q5T5J6 900 aaKnown RBP5.69□□□□□ -1.5
BRCA1-203ENST00000357654 NSMAFQ92636 917 aa5.69□□□□□ -1.5
BRCA1-203ENST00000357654 APBB2Q92870 758 aa5.69□□□□□ -1.5
BRCA1-203ENST00000357654 KLHDC7BQ96G42 594 aa5.69□□□□□ -1.5
BRCA1-203ENST00000357654 SLC35G5Q96KT7 338 aa5.69□□□□□ -1.5
BRCA1-203ENST00000357654 C12orf65Q9H3J6 166 aaKnown RBP5.69□□□□□ -1.5
BRCA1-203ENST00000357654 NANSQ9NR45 359 aa5.69□□□□□ -1.5
BRCA1-203ENST00000357654 RRN3Q9NYV6 651 aa5.69□□□□□ -1.5
BRCA1-203ENST00000357654 EGFL7Q9UHF1 273 aa5.69□□□□□ -1.5
BRCA1-203ENST00000357654 CORO1CQ9ULV4 474 aaPredicted RBP5.69□□□□□ -1.5
BRCA1-203ENST00000357654 SPIN1Q9Y657 262 aaPredicted RBP5.69□□□□□ -1.5
BRCA1-203ENST00000357654 DNMT1P26358 1616 aaKnown RBP5.69□□□□□ -1.5
BRCA1-203ENST00000357654 SPATA31A3Q5VYP0 1347 aa5.69□□□□□ -1.5
BRCA1-203ENST00000357654 A0A087WUU8 490 aa5.69□□□□□ -1.5
BRCA1-203ENST00000357654 A0A0A6YYH2 397 aa5.69□□□□□ -1.5
BRCA1-203ENST00000357654 CRYM-AS1A6NIL9 109 aa5.69□□□□□ -1.5
BRCA1-203ENST00000357654 A6NJ64 397 aa5.69□□□□□ -1.5
BRCA1-203ENST00000357654 CD2P06729 351 aa5.69□□□□□ -1.5
BRCA1-203ENST00000357654 DLDP09622 509 aaKnown RBP5.69□□□□□ -1.5
BRCA1-203ENST00000357654 CBSLP0DN79 551 aa5.69□□□□□ -1.5
BRCA1-203ENST00000357654 TNFSF4P23510 183 aa5.69□□□□□ -1.5
BRCA1-203ENST00000357654 CBSP35520 551 aa5.69□□□□□ -1.5
BRCA1-203ENST00000357654 TOB1P50616 345 aaPredicted RBP5.69□□□□□ -1.5
BRCA1-203ENST00000357654 ZNF81P51508 661 aa5.69□□□□□ -1.5
BRCA1-203ENST00000357654 ZNF84P51523 738 aa5.69□□□□□ -1.5
BRCA1-203ENST00000357654 KCNMA1Q12791 1236 aa5.69□□□□□ -1.5
BRCA1-203ENST00000357654 ITIH4Q14624 930 aa5.69□□□□□ -1.5
BRCA1-203ENST00000357654 CTC1Q2NKJ3 1217 aa5.69□□□□□ -1.5
BRCA1-203ENST00000357654 TIMM50Q3ZCQ8 353 aa5.69□□□□□ -1.5
BRCA1-203ENST00000357654 NEPROQ6NW34 567 aa5.69□□□□□ -1.5
BRCA1-203ENST00000357654 C15orf52Q6ZUT6 534 aaKnown RBP5.69□□□□□ -1.5
BRCA1-203ENST00000357654 TMED4Q7Z7H5 227 aa5.69□□□□□ -1.5
BRCA1-203ENST00000357654 IL17RCQ8NAC3 791 aa5.69□□□□□ -1.5
BRCA1-203ENST00000357654 HDAC10Q969S8 669 aa5.69□□□□□ -1.5
BRCA1-203ENST00000357654 PPP3R2Q96LZ3 170 aa5.69□□□□□ -1.5
BRCA1-203ENST00000357654 ZNF570Q96NI8 536 aa5.69□□□□□ -1.5
BRCA1-203ENST00000357654 SUCNR1Q9BXA5 334 aa5.69□□□□□ -1.5
BRCA1-203ENST00000357654 PCDH10Q9P2E7 1040 aa5.69□□□□□ -1.5
BRCA1-203ENST00000357654 NUFIP1Q9UHK0 495 aaKnown RBP5.69□□□□□ -1.5
BRCA1-203ENST00000357654 ABCC2Q92887 1545 aa5.69□□□□□ -1.5
BRCA1-203ENST00000357654 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.69□□□□□ -1.5
BRCA1-203ENST00000357654 NR2F6P10588 404 aa5.69□□□□□ -1.5
BRCA1-203ENST00000357654 VAMP1P23763 118 aa5.69□□□□□ -1.5
BRCA1-203ENST00000357654 C6orf141Q5SZD1 244 aa5.69□□□□□ -1.5
BRCA1-203ENST00000357654 KIAA1161Q6NSJ0 714 aa5.69□□□□□ -1.5
BRCA1-203ENST00000357654 SLC26A11Q86WA9 606 aa5.69□□□□□ -1.5
BRCA1-203ENST00000357654 OR7A2PQ8NGA2 310 aa5.69□□□□□ -1.5
BRCA1-203ENST00000357654 H1FXQ92522 213 aaKnown RBP5.69□□□□□ -1.5
BRCA1-203ENST00000357654 B3GNT2Q9NY97 397 aa5.69□□□□□ -1.5
BRCA1-203ENST00000357654 PPP4R1LQ9P1A2 415 aa5.69□□□□□ -1.5
BRCA1-203ENST00000357654 KCNK6Q9Y257 313 aa5.69□□□□□ -1.5
BRCA1-203ENST00000357654 A0A1B0GVI7 797 aa5.69□□□□□ -1.5
BRCA1-203ENST00000357654 CRXO43186 299 aaPredicted RBP5.69□□□□□ -1.5
BRCA1-203ENST00000357654 CHST10O43529 356 aa5.69□□□□□ -1.5
BRCA1-203ENST00000357654 LILRB5O75023 590 aa5.69□□□□□ -1.5
BRCA1-203ENST00000357654 HNRNPLP14866 589 aaKnown RBP eCLIP5.69□□□□□ -1.5
BRCA1-203ENST00000357654 POLR2CP19387 275 aaPredicted RBP5.69□□□□□ -1.5
BRCA1-203ENST00000357654 CNTFP26441 200 aa5.69□□□□□ -1.5
BRCA1-203ENST00000357654 PXNP49023 591 aaPredicted RBP5.69□□□□□ -1.5
BRCA1-203ENST00000357654 NDUFA6P56556 154 aa5.69□□□□□ -1.5
BRCA1-203ENST00000357654 FXYD6P3P58550 94 aa5.69□□□□□ -1.5
BRCA1-203ENST00000357654 EEF1A1P68104 462 aaKnown RBP5.69□□□□□ -1.5
BRCA1-203ENST00000357654 EEF1A1P5Q5VTE0 462 aa5.69□□□□□ -1.5
BRCA1-203ENST00000357654 TNFAIP8L2Q6P589 184 aaPredicted RBP5.69□□□□□ -1.5
BRCA1-203ENST00000357654 WDR53Q7Z5U6 358 aaPredicted RBP5.69□□□□□ -1.5
BRCA1-203ENST00000357654 LDB1Q86U70 411 aaPredicted RBP5.69□□□□□ -1.5
BRCA1-203ENST00000357654 ANKRD46Q86W74 232 aa5.69□□□□□ -1.5
BRCA1-203ENST00000357654 RALGPS2Q86X27 583 aaPredicted RBP5.69□□□□□ -1.5
BRCA1-203ENST00000357654 TIGD4Q8IY51 512 aa5.69□□□□□ -1.5
BRCA1-203ENST00000357654 TMEM192Q8IY95 271 aa5.69□□□□□ -1.5
BRCA1-203ENST00000357654 LRRC34Q8IZ02 419 aa5.69□□□□□ -1.5
BRCA1-203ENST00000357654 EIF1ADQ8N9N8 165 aaKnown RBP5.69□□□□□ -1.5
BRCA1-203ENST00000357654 GOT1L1Q8NHS2 421 aaPredicted RBP5.69□□□□□ -1.5
BRCA1-203ENST00000357654 DQX1Q8TE96 717 aaKnown RBP5.69□□□□□ -1.5
BRCA1-203ENST00000357654 BPIFA2Q96DR5 249 aa5.69□□□□□ -1.5
BRCA1-203ENST00000357654 LPIN3Q9BQK8 851 aa5.69□□□□□ -1.5
BRCA1-203ENST00000357654 C9orf16Q9BUW7 83 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms