RNA–Protein interactions for RNA: ENST00000357568.7

CAPN3-205, Transcript of calpain 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAPN3, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-205ENST00000357568 SLC46A3Q7Z3Q1 461 aa10.41□□□□□ -0.74
CAPN3-205ENST00000357568 HS3ST5Q8IZT8 346 aa10.41□□□□□ -0.74
CAPN3-205ENST00000357568 RYBPQ8N488 228 aaPredicted RBP10.41□□□□□ -0.74
CAPN3-205ENST00000357568 FLCNQ8NFG4 579 aa10.41□□□□□ -0.74
CAPN3-205ENST00000357568 NACC2Q96BF6 587 aa10.41□□□□□ -0.74
CAPN3-205ENST00000357568 C1orf74Q96LT6 269 aa10.41□□□□□ -0.74
CAPN3-205ENST00000357568 CDK5RAP1Q96SZ6 601 aaKnown RBP10.41□□□□□ -0.74
CAPN3-205ENST00000357568 PPP1R16BQ96T49 567 aa10.41□□□□□ -0.74
CAPN3-205ENST00000357568 ATXN3LQ9H3M9 355 aa10.41□□□□□ -0.74
CAPN3-205ENST00000357568 NXF3Q9H4D5 531 aaKnown RBP10.41□□□□□ -0.74
CAPN3-205ENST00000357568 LTB4R2Q9NPC1 389 aa10.41□□□□□ -0.74
CAPN3-205ENST00000357568 DIABLOQ9NR28 239 aa10.41□□□□□ -0.74
CAPN3-205ENST00000357568 IL37Q9NZH6 218 aa10.41□□□□□ -0.74
CAPN3-205ENST00000357568 NUDT4Q9NZJ9 180 aa10.41□□□□□ -0.74
CAPN3-205ENST00000357568 VAPAQ9P0L0 249 aa10.41□□□□□ -0.74
CAPN3-205ENST00000357568 SAMD4AQ9UPU9 718 aaKnown RBP10.41□□□□□ -0.74
CAPN3-205ENST00000357568 RNF6Q9Y252 685 aa10.41□□□□□ -0.74
CAPN3-205ENST00000357568 TNPO3Q9Y5L0 923 aaKnown RBP10.41□□□□□ -0.74
CAPN3-205ENST00000357568 AP1M2Q9Y6Q5 423 aa10.41□□□□□ -0.74
CAPN3-205ENST00000357568 NUP205Q92621 2012 aa10.41□□□□□ -0.74
CAPN3-205ENST00000357568 A0A075B6Q4 140 aa10.41□□□□□ -0.74
CAPN3-205ENST00000357568 A8MU76 341 aa10.41□□□□□ -0.74
CAPN3-205ENST00000357568 PDZK1P1A8MUH7 402 aa10.41□□□□□ -0.74
CAPN3-205ENST00000357568 E2F3O00716 465 aa10.41□□□□□ -0.74
CAPN3-205ENST00000357568 DFNA5O60443 496 aa10.41□□□□□ -0.74
CAPN3-205ENST00000357568 UGT2B17O75795 530 aa10.41□□□□□ -0.74
CAPN3-205ENST00000357568 ARHGEF15O94989 841 aa10.41□□□□□ -0.74
CAPN3-205ENST00000357568 FADS2O95864 444 aaKnown RBP10.41□□□□□ -0.74
CAPN3-205ENST00000357568 CXCL10P02778 98 aa10.41□□□□□ -0.74
CAPN3-205ENST00000357568 RPLP0P05388 317 aaKnown RBP10.41□□□□□ -0.74
CAPN3-205ENST00000357568 DARSP14868 501 aaKnown RBP10.41□□□□□ -0.74
CAPN3-205ENST00000357568 DNAJA1P31689 397 aaKnown RBP10.41□□□□□ -0.74
CAPN3-205ENST00000357568 CCR1P32246 355 aa10.41□□□□□ -0.74
CAPN3-205ENST00000357568 GGT5P36269 586 aa10.41□□□□□ -0.74
CAPN3-205ENST00000357568 GZMMP51124 257 aa10.41□□□□□ -0.74
CAPN3-205ENST00000357568 UGT2B15P54855 530 aa10.41□□□□□ -0.74
CAPN3-205ENST00000357568 STARD3Q14849 445 aa10.41□□□□□ -0.74
CAPN3-205ENST00000357568 PCBP2Q15366 365 aaKnown RBP eCLIP10.41□□□□□ -0.74
CAPN3-205ENST00000357568 PCSK7Q16549 785 aa10.41□□□□□ -0.74
CAPN3-205ENST00000357568 RBBP7Q16576 425 aa10.41□□□□□ -0.74
CAPN3-205ENST00000357568 LRIF1Q5T3J3 769 aa10.41□□□□□ -0.74
CAPN3-205ENST00000357568 KIAA1614Q5VZ46 1190 aa10.41□□□□□ -0.74
CAPN3-205ENST00000357568 WSCD1Q658N2 575 aa10.41□□□□□ -0.74
CAPN3-205ENST00000357568 PPP2R2DQ66LE6 453 aa10.41□□□□□ -0.74
CAPN3-205ENST00000357568 VN1R5Q7Z5H4 357 aa10.41□□□□□ -0.74
CAPN3-205ENST00000357568 CYP4Z1Q86W10 505 aa10.41□□□□□ -0.74
CAPN3-205ENST00000357568 HORMAD1Q86X24 394 aa10.41□□□□□ -0.74
CAPN3-205ENST00000357568 C7orf61Q8IZ16 206 aa10.41□□□□□ -0.74
CAPN3-205ENST00000357568 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.41□□□□□ -0.74
CAPN3-205ENST00000357568 TRIM43Q96BQ3 446 aaPredicted RBP10.41□□□□□ -0.74
CAPN3-205ENST00000357568 GAD1Q99259 594 aa10.41□□□□□ -0.74
CAPN3-205ENST00000357568 REPIN1Q9BWE0 567 aaKnown RBP10.41□□□□□ -0.74
CAPN3-205ENST00000357568 CDADC1Q9BWV3 514 aa10.41□□□□□ -0.74
CAPN3-205ENST00000357568 PIF1Q9H611 641 aa10.41□□□□□ -0.74
CAPN3-205ENST00000357568 FKBP14Q9NWM8 211 aa10.41□□□□□ -0.74
CAPN3-205ENST00000357568 C1orf109Q9NX04 203 aa10.41□□□□□ -0.74
CAPN3-205ENST00000357568 FBXL12Q9NXK8 326 aa10.41□□□□□ -0.74
CAPN3-205ENST00000357568 TBC1D14Q9P2M4 693 aa10.41□□□□□ -0.74
CAPN3-205ENST00000357568 MAN2B2Q9Y2E5 1009 aa10.41□□□□□ -0.74
CAPN3-205ENST00000357568 CRYL1Q9Y2S2 319 aa10.41□□□□□ -0.74
CAPN3-205ENST00000357568 PCDHGA3Q9Y5H0 932 aa10.41□□□□□ -0.74
CAPN3-205ENST00000357568 LYVE1Q9Y5Y7 322 aa10.41□□□□□ -0.74
CAPN3-205ENST00000357568 COMMD10Q9Y6G5 202 aa10.41□□□□□ -0.74
CAPN3-205ENST00000357568 ZBBXA8MT70 800 aa10.41□□□□□ -0.74
CAPN3-205ENST00000357568 WNT9AO14904 365 aa10.41□□□□□ -0.74
CAPN3-205ENST00000357568 GPR37O15354 613 aa10.41□□□□□ -0.74
CAPN3-205ENST00000357568 PAGE1O75459 146 aa10.41□□□□□ -0.74
CAPN3-205ENST00000357568 RHOBTB1O94844 696 aa10.41□□□□□ -0.74
CAPN3-205ENST00000357568 G6PDP11413 515 aa10.41□□□□□ -0.74
CAPN3-205ENST00000357568 CLCNKBP51801 687 aa10.41□□□□□ -0.74
CAPN3-205ENST00000357568 OR2B6P58173 313 aa10.41□□□□□ -0.74
CAPN3-205ENST00000357568 OLR1P78380 273 aa10.41□□□□□ -0.74
CAPN3-205ENST00000357568 BNC1Q01954 994 aa10.41□□□□□ -0.74
CAPN3-205ENST00000357568 SOX4Q06945 474 aaPredicted RBP10.41□□□□□ -0.74
CAPN3-205ENST00000357568 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.41□□□□□ -0.74
CAPN3-205ENST00000357568 FAM219BQ5XKK7 198 aa10.41□□□□□ -0.74
CAPN3-205ENST00000357568 CCDC81Q6ZN84 652 aa10.41□□□□□ -0.74
CAPN3-205ENST00000357568 CCDC190Q86UF4 302 aa10.41□□□□□ -0.74
CAPN3-205ENST00000357568 ANKK1Q8NFD2 765 aa10.41□□□□□ -0.74
CAPN3-205ENST00000357568 OR4L1Q8NH43 312 aa10.41□□□□□ -0.74
CAPN3-205ENST00000357568 OR10A6Q8NH74 314 aa10.41□□□□□ -0.74
CAPN3-205ENST00000357568 BRSK1Q8TDC3 778 aa10.41□□□□□ -0.74
CAPN3-205ENST00000357568 SH3RF2Q8TEC5 729 aa10.41□□□□□ -0.74
CAPN3-205ENST00000357568 MYDGFQ969H8 173 aa10.41□□□□□ -0.74
CAPN3-205ENST00000357568 ERLEC1Q96DZ1 483 aa10.41□□□□□ -0.74
CAPN3-205ENST00000357568 GDF15Q99988 308 aa10.41□□□□□ -0.74
CAPN3-205ENST00000357568 CEP44Q9C0F1 390 aa10.41□□□□□ -0.74
CAPN3-205ENST00000357568 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.41□□□□□ -0.74
CAPN3-205ENST00000357568 PCDHGB2Q9Y5G2 931 aa10.41□□□□□ -0.74
CAPN3-205ENST00000357568 KLK4Q9Y5K2 254 aa10.41□□□□□ -0.74
CAPN3-205ENST00000357568 GBF1Q92538 1859 aa10.4□□□□□ -0.74
CAPN3-205ENST00000357568 KIAA0100Q14667 2235 aaKnown RBP10.4□□□□□ -0.74
CAPN3-205ENST00000357568 CENPXA8MT69 81 aa10.4□□□□□ -0.74
CAPN3-205ENST00000357568 PRKCAP17252 672 aa10.4□□□□□ -0.74
CAPN3-205ENST00000357568 PFKLP17858 780 aa10.4□□□□□ -0.74
CAPN3-205ENST00000357568 TIE1P35590 1138 aa10.4□□□□□ -0.74
CAPN3-205ENST00000357568 KRT20P35900 424 aa10.4□□□□□ -0.74
CAPN3-205ENST00000357568 CD86P42081 329 aa10.4□□□□□ -0.74
CAPN3-205ENST00000357568 PIK3CBP42338 1070 aa10.4□□□□□ -0.74
CAPN3-205ENST00000357568 TSNQ15631 228 aaKnown RBP10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms