RNA–Protein interactions for RNA: ENST00000356922.5

LIG4-201, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-201ENST00000356922 IRF2BPLQ9H1B7 796 aa3.9□□□□□ -1.78
LIG4-201ENST00000356922 KIR3DX1Q9H7L2 352 aa3.9□□□□□ -1.78
LIG4-201ENST00000356922 NMRAL1Q9HBL8 299 aa3.9□□□□□ -1.78
LIG4-201ENST00000356922 NLGN3Q9NZ94 848 aa3.9□□□□□ -1.78
LIG4-201ENST00000356922 TLK1Q9UKI8 766 aa3.9□□□□□ -1.78
LIG4-201ENST00000356922 CORO1CQ9ULV4 474 aaPredicted RBP3.9□□□□□ -1.78
LIG4-201ENST00000356922 CSNK1G3Q9Y6M4 447 aa3.9□□□□□ -1.78
LIG4-201ENST00000356922 TPRP12270 2363 aaKnown RBP3.9□□□□□ -1.79
LIG4-201ENST00000356922 TMEM120BA0PK00 339 aa3.9□□□□□ -1.79
LIG4-201ENST00000356922 DCDC2BA2VCK2 349 aa3.9□□□□□ -1.79
LIG4-201ENST00000356922 OR6C74A6NCV1 312 aa3.9□□□□□ -1.79
LIG4-201ENST00000356922 CER1O95813 267 aa3.9□□□□□ -1.79
LIG4-201ENST00000356922 GSTM1P09488 218 aa3.9□□□□□ -1.79
LIG4-201ENST00000356922 NEFHP12036 1026 aa3.9□□□□□ -1.79
LIG4-201ENST00000356922 POLR2CP19387 275 aaPredicted RBP3.9□□□□□ -1.79
LIG4-201ENST00000356922 CD22P20273 847 aa3.9□□□□□ -1.79
LIG4-201ENST00000356922 ARL1P40616 181 aaPredicted RBP3.9□□□□□ -1.79
LIG4-201ENST00000356922 HSPA7P48741 367 aa3.9□□□□□ -1.79
LIG4-201ENST00000356922 CCL7P80098 99 aa3.9□□□□□ -1.79
LIG4-201ENST00000356922 MEF2AQ02078 507 aaPredicted RBP3.9□□□□□ -1.79
LIG4-201ENST00000356922 GSTM4Q03013 218 aa3.9□□□□□ -1.79
LIG4-201ENST00000356922 PCLAFQ15004 111 aa3.9□□□□□ -1.79
LIG4-201ENST00000356922 ACAP2Q15057 778 aa3.9□□□□□ -1.79
LIG4-201ENST00000356922 PTCHD3Q3KNS1 767 aa3.9□□□□□ -1.79
LIG4-201ENST00000356922 TTC19Q6DKK2 380 aaPredicted RBP3.9□□□□□ -1.79
LIG4-201ENST00000356922 LRRC8EQ6NSJ5 796 aa3.9□□□□□ -1.79
LIG4-201ENST00000356922 TMEM26Q6ZUK4 368 aa3.9□□□□□ -1.79
LIG4-201ENST00000356922 TBC1D1Q86TI0 1168 aaPredicted RBP3.9□□□□□ -1.79
LIG4-201ENST00000356922 GKN2Q86XP6 184 aa3.9□□□□□ -1.79
LIG4-201ENST00000356922 PLD3Q8IV08 490 aa3.9□□□□□ -1.79
LIG4-201ENST00000356922 SDR16C5Q8N3Y7 309 aa3.9□□□□□ -1.79
LIG4-201ENST00000356922 ARL10Q8N8L6 244 aa3.9□□□□□ -1.79
LIG4-201ENST00000356922 OR2A1Q8NGT9 310 aa3.9□□□□□ -1.79
LIG4-201ENST00000356922 MGARPQ8TDB4 240 aa3.9□□□□□ -1.79
LIG4-201ENST00000356922 CCDC74AQ96AQ1 378 aa3.9□□□□□ -1.79
LIG4-201ENST00000356922 ATP6V1G3Q96LB4 118 aa3.9□□□□□ -1.79
LIG4-201ENST00000356922 CDK15Q96Q40 435 aa3.9□□□□□ -1.79
LIG4-201ENST00000356922 MACROD1Q9BQ69 325 aa3.9□□□□□ -1.79
LIG4-201ENST00000356922 SHCBP1LQ9BZQ2 653 aa3.9□□□□□ -1.79
LIG4-201ENST00000356922 KCNH6Q9H252 994 aa3.9□□□□□ -1.79
LIG4-201ENST00000356922 PARVBQ9HBI1 364 aa3.9□□□□□ -1.79
LIG4-201ENST00000356922 POPDC3Q9HBV1 291 aa3.9□□□□□ -1.79
LIG4-201ENST00000356922 STOX2Q9P2F5 926 aaPredicted RBP3.9□□□□□ -1.79
LIG4-201ENST00000356922 PTBP2Q9UKA9 531 aaKnown RBP3.9□□□□□ -1.79
LIG4-201ENST00000356922 SLC22A14Q9Y267 594 aa3.9□□□□□ -1.79
LIG4-201ENST00000356922 IGHV1OR21-1A0A087WYE8 117 aa3.9□□□□□ -1.79
LIG4-201ENST00000356922 A8MT66 165 aa3.9□□□□□ -1.79
LIG4-201ENST00000356922 MYO1CO00159 1063 aa3.9□□□□□ -1.79
LIG4-201ENST00000356922 VIPP01282 170 aa3.9□□□□□ -1.79
LIG4-201ENST00000356922 STATHP02808 62 aa3.9□□□□□ -1.79
LIG4-201ENST00000356922 CKMT1AP12532 417 aa3.9□□□□□ -1.79
LIG4-201ENST00000356922 VCLP18206 1134 aa3.9□□□□□ -1.79
LIG4-201ENST00000356922 CNTFP26441 200 aa3.9□□□□□ -1.79
LIG4-201ENST00000356922 NAE1Q13564 534 aa3.9□□□□□ -1.79
LIG4-201ENST00000356922 CATSPEREQ5SY80 951 aa3.9□□□□□ -1.79
LIG4-201ENST00000356922 ZCCHC8Q6NZY4 707 aaKnown RBP3.9□□□□□ -1.79
LIG4-201ENST00000356922 AGTRAPQ6RW13 159 aa3.9□□□□□ -1.79
LIG4-201ENST00000356922 IL27RAQ6UWB1 636 aa3.9□□□□□ -1.79
LIG4-201ENST00000356922 NAXDQ8IW45 347 aa3.9□□□□□ -1.79
LIG4-201ENST00000356922 TMEM151BQ8IW70 566 aa3.9□□□□□ -1.79
LIG4-201ENST00000356922 TRIM48Q8IWZ4 208 aa3.9□□□□□ -1.79
LIG4-201ENST00000356922 TBC1D21Q8IYX1 336 aa3.9□□□□□ -1.79
LIG4-201ENST00000356922 NKAPQ8N5F7 415 aaKnown RBP3.9□□□□□ -1.79
LIG4-201ENST00000356922 FAM181AQ8N9Y4 354 aa3.9□□□□□ -1.79
LIG4-201ENST00000356922 OR52B6Q8NGF0 335 aa3.9□□□□□ -1.79
LIG4-201ENST00000356922 PMEPA1Q969W9 287 aa3.9□□□□□ -1.79
LIG4-201ENST00000356922 ALKBH8Q96BT7 664 aaKnown RBP3.9□□□□□ -1.79
LIG4-201ENST00000356922 MTBPQ96DY7 904 aa3.9□□□□□ -1.79
LIG4-201ENST00000356922 TMEM237Q96Q45 408 aa3.9□□□□□ -1.79
LIG4-201ENST00000356922 OR2A14Q96R47 310 aa3.9□□□□□ -1.79
LIG4-201ENST00000356922 CCDC3Q9BQI4 270 aa3.9□□□□□ -1.79
LIG4-201ENST00000356922 SYTL2Q9HCH5 934 aa3.9□□□□□ -1.79
LIG4-201ENST00000356922 FAM60AQ9NP50 221 aa3.9□□□□□ -1.79
LIG4-201ENST00000356922 CUEDC1Q9NWM3 386 aaPredicted RBP3.9□□□□□ -1.79
LIG4-201ENST00000356922 ARL15Q9NXU5 204 aa3.9□□□□□ -1.79
LIG4-201ENST00000356922 KLHL42Q9P2K6 505 aa3.9□□□□□ -1.79
LIG4-201ENST00000356922 KLHL3Q9UH77 587 aa3.9□□□□□ -1.79
LIG4-201ENST00000356922 APC2O95996 2303 aa3.89□□□□□ -1.79
LIG4-201ENST00000356922 IGHV5-51A0A0C4DH38 117 aa3.89□□□□□ -1.79
LIG4-201ENST00000356922 FAM149AA5PLN7 773 aa3.89□□□□□ -1.79
LIG4-201ENST00000356922 QSOX1O00391 747 aa3.89□□□□□ -1.79
LIG4-201ENST00000356922 ITM2AO43736 263 aa3.89□□□□□ -1.79
LIG4-201ENST00000356922 NUDT21O43809 227 aaKnown RBP3.89□□□□□ -1.79
LIG4-201ENST00000356922 HYAL3O43820 417 aaPredicted RBP3.89□□□□□ -1.79
LIG4-201ENST00000356922 KLK8O60259 260 aa3.89□□□□□ -1.79
LIG4-201ENST00000356922 TBX6O95947 436 aaPredicted RBP3.89□□□□□ -1.79
LIG4-201ENST00000356922 MPOP05164 745 aa3.89□□□□□ -1.79
LIG4-201ENST00000356922 DHRS4L1P0CG22 281 aa3.89□□□□□ -1.79
LIG4-201ENST00000356922 MPC1LP0DKB6 136 aa3.89□□□□□ -1.79
LIG4-201ENST00000356922 CBSLP0DN79 551 aa3.89□□□□□ -1.79
LIG4-201ENST00000356922 ERGP11308 486 aa3.89□□□□□ -1.79
LIG4-201ENST00000356922 GLB1P16278 677 aa3.89□□□□□ -1.79
LIG4-201ENST00000356922 ALDH3A1P30838 453 aa3.89□□□□□ -1.79
LIG4-201ENST00000356922 CBSP35520 551 aa3.89□□□□□ -1.79
LIG4-201ENST00000356922 ATP1A2P50993 1020 aa3.89□□□□□ -1.79
LIG4-201ENST00000356922 FOXA1P55317 472 aa3.89□□□□□ -1.79
LIG4-201ENST00000356922 FAM83EQ2M2I3 478 aa3.89□□□□□ -1.79
LIG4-201ENST00000356922 LGSNQ5TDP6 509 aa3.89□□□□□ -1.79
LIG4-201ENST00000356922 PRAMEF17Q5VTA0 474 aa3.89□□□□□ -1.79
LIG4-201ENST00000356922 KIAA1614Q5VZ46 1190 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms