RNA–Protein interactions for RNA: ENST00000356805.8

SPTBN1-202, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTBN1, Length 8,482 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-202ENST00000356805 PTF1AQ7RTS3 328 aa11.3□□□□□ -0.6
SPTBN1-202ENST00000356805 CMC1Q7Z7K0 106 aa11.3□□□□□ -0.6
SPTBN1-202ENST00000356805 LDB1Q86U70 411 aaPredicted RBP11.3□□□□□ -0.6
SPTBN1-202ENST00000356805 LCN9Q8WX39 176 aa11.3□□□□□ -0.6
SPTBN1-202ENST00000356805 DUS2Q9NX74 493 aaKnown RBP11.3□□□□□ -0.6
SPTBN1-202ENST00000356805 TIMM22Q9Y584 194 aa11.3□□□□□ -0.6
SPTBN1-202ENST00000356805 ZNF701M0R085 212 aaPredicted RBP11.29□□□□□ -0.6
SPTBN1-202ENST00000356805 B3GALT2O43825 422 aa11.29□□□□□ -0.6
SPTBN1-202ENST00000356805 CDH1P12830 882 aa11.29□□□□□ -0.6
SPTBN1-202ENST00000356805 UQCRC1P31930 480 aa11.29□□□□□ -0.6
SPTBN1-202ENST00000356805 OC90Q02509 493 aaPredicted RBP11.29□□□□□ -0.6
SPTBN1-202ENST00000356805 RNASEH2BQ5TBB1 312 aaKnown RBP11.29□□□□□ -0.6
SPTBN1-202ENST00000356805 PIGZQ86VD9 579 aa11.29□□□□□ -0.6
SPTBN1-202ENST00000356805 HID1Q8IV36 788 aa11.29□□□□□ -0.6
SPTBN1-202ENST00000356805 LIX1Q8N485 282 aa11.29□□□□□ -0.6
SPTBN1-202ENST00000356805 HDDC3Q8N4P3 179 aa11.29□□□□□ -0.6
SPTBN1-202ENST00000356805 OR2L2Q8NH16 312 aa11.29□□□□□ -0.6
SPTBN1-202ENST00000356805 TWIST2Q8WVJ9 160 aa11.29□□□□□ -0.6
SPTBN1-202ENST00000356805 ASB12Q8WXK4 309 aa11.29□□□□□ -0.6
SPTBN1-202ENST00000356805 HSPBAP1Q96EW2 488 aa11.29□□□□□ -0.6
SPTBN1-202ENST00000356805 C14orf105Q9NVL8 296 aa11.29□□□□□ -0.6
SPTBN1-202ENST00000356805 PPEF2O14830 753 aa11.29□□□□□ -0.6
SPTBN1-202ENST00000356805 MSCO60682 206 aa11.29□□□□□ -0.6
SPTBN1-202ENST00000356805 FGF19O95750 216 aa11.29□□□□□ -0.6
SPTBN1-202ENST00000356805 IL33O95760 270 aa11.29□□□□□ -0.6
SPTBN1-202ENST00000356805 NOMO1Q15155 1222 aa11.29□□□□□ -0.6
SPTBN1-202ENST00000356805 HECTD2Q5U5R9 776 aa11.29□□□□□ -0.6
SPTBN1-202ENST00000356805 MED27Q6P2C8 311 aa11.29□□□□□ -0.6
SPTBN1-202ENST00000356805 SPOCK2Q92563 424 aa11.29□□□□□ -0.6
SPTBN1-202ENST00000356805 DNAJC19Q96DA6 116 aa11.29□□□□□ -0.6
SPTBN1-202ENST00000356805 PCDHGB1Q9Y5G3 927 aa11.29□□□□□ -0.6
SPTBN1-202ENST00000356805 OTOL1A6NHN0 477 aaPredicted RBP11.29□□□□□ -0.6
SPTBN1-202ENST00000356805 CYP11A1P05108 521 aa11.29□□□□□ -0.6
SPTBN1-202ENST00000356805 ALPPL2P10696 532 aa11.29□□□□□ -0.6
SPTBN1-202ENST00000356805 IDSP22304 550 aa11.29□□□□□ -0.6
SPTBN1-202ENST00000356805 SP2Q02086 613 aa11.29□□□□□ -0.6
SPTBN1-202ENST00000356805 EMC10Q5UCC4 262 aa11.29□□□□□ -0.6
SPTBN1-202ENST00000356805 FSTL5Q8N475 847 aaPredicted RBP11.29□□□□□ -0.6
SPTBN1-202ENST00000356805 C12orf43Q96C57 262 aaKnown RBP11.29□□□□□ -0.6
SPTBN1-202ENST00000356805 DISP2A7MBM2 1401 aa11.29□□□□□ -0.6
SPTBN1-202ENST00000356805 A0A0U1RQJ8 604 aa11.29□□□□□ -0.6
SPTBN1-202ENST00000356805 ANXA4P09525 319 aaPredicted RBP11.29□□□□□ -0.6
SPTBN1-202ENST00000356805 PRKD1Q15139 912 aaPredicted RBP11.29□□□□□ -0.6
SPTBN1-202ENST00000356805 CPNE9Q8IYJ1 553 aa11.29□□□□□ -0.6
SPTBN1-202ENST00000356805 GALNT11Q8NCW6 608 aa11.29□□□□□ -0.6
SPTBN1-202ENST00000356805 PCDH19Q8TAB3 1148 aa11.29□□□□□ -0.6
SPTBN1-202ENST00000356805 ABHD5Q8WTS1 349 aa11.29□□□□□ -0.6
SPTBN1-202ENST00000356805 TNFRSF25Q93038 417 aa11.29□□□□□ -0.6
SPTBN1-202ENST00000356805 SCGB3A2Q96PL1 93 aa11.29□□□□□ -0.6
SPTBN1-202ENST00000356805 ACO2Q99798 780 aaKnown RBP11.29□□□□□ -0.6
SPTBN1-202ENST00000356805 BRF2Q9HAW0 419 aa11.29□□□□□ -0.6
SPTBN1-202ENST00000356805 ASTN1O14525 1302 aa11.29□□□□□ -0.6
SPTBN1-202ENST00000356805 YDJCA8MPS7 323 aa11.29□□□□□ -0.6
SPTBN1-202ENST00000356805 GPR89AB7ZAQ6 455 aa11.29□□□□□ -0.6
SPTBN1-202ENST00000356805 ABCB7O75027 752 aa11.29□□□□□ -0.6
SPTBN1-202ENST00000356805 GPR89BP0CG08 455 aa11.29□□□□□ -0.6
SPTBN1-202ENST00000356805 ZNF3P17036 446 aa11.29□□□□□ -0.6
SPTBN1-202ENST00000356805 IDH3AP50213 366 aa11.29□□□□□ -0.6
SPTBN1-202ENST00000356805 VGLL4Q14135 290 aa11.29□□□□□ -0.6
SPTBN1-202ENST00000356805 ZDHHC20Q5W0Z9 365 aa11.29□□□□□ -0.6
SPTBN1-202ENST00000356805 CEP76Q8TAP6 659 aa11.29□□□□□ -0.6
SPTBN1-202ENST00000356805 KLK6Q92876 244 aa11.29□□□□□ -0.6
SPTBN1-202ENST00000356805 BORCS8Q96FH0 119 aa11.29□□□□□ -0.6
SPTBN1-202ENST00000356805 MAGED1Q9Y5V3 778 aaPredicted RBP11.29□□□□□ -0.6
SPTBN1-202ENST00000356805 VNN2O95498 520 aa11.29□□□□□ -0.6
SPTBN1-202ENST00000356805 PRPS2P11908 318 aa11.29□□□□□ -0.6
SPTBN1-202ENST00000356805 EIF1AXP47813 144 aaKnown RBP11.29□□□□□ -0.6
SPTBN1-202ENST00000356805 ADAM15Q13444 863 aa11.29□□□□□ -0.6
SPTBN1-202ENST00000356805 ARL13AQ5H913 290 aaPredicted RBP11.29□□□□□ -0.6
SPTBN1-202ENST00000356805 FCRL2Q96LA5 508 aaPredicted RBP11.29□□□□□ -0.6
SPTBN1-202ENST00000356805 TMEM68Q96MH6 324 aa11.29□□□□□ -0.6
SPTBN1-202ENST00000356805 SRMSQ9H3Y6 488 aa11.29□□□□□ -0.6
SPTBN1-202ENST00000356805 SLC31A1O15431 190 aa11.28□□□□□ -0.6
SPTBN1-202ENST00000356805 SSX5O60225 188 aa11.28□□□□□ -0.6
SPTBN1-202ENST00000356805 RPP40O75818 363 aaKnown RBP11.28□□□□□ -0.6
SPTBN1-202ENST00000356805 MTHFD1P11586 935 aaKnown RBP11.28□□□□□ -0.6
SPTBN1-202ENST00000356805 CDH12P55289 794 aa11.28□□□□□ -0.6
SPTBN1-202ENST00000356805 LAPTM5Q13571 262 aa11.28□□□□□ -0.6
SPTBN1-202ENST00000356805 RHEBQ15382 184 aa11.28□□□□□ -0.6
SPTBN1-202ENST00000356805 CRTC2Q53ET0 693 aaPredicted RBP11.28□□□□□ -0.6
SPTBN1-202ENST00000356805 FIP1L1Q6UN15 594 aaKnown RBP11.28□□□□□ -0.6
SPTBN1-202ENST00000356805 KIF18BQ86Y91 864 aa11.28□□□□□ -0.6
SPTBN1-202ENST00000356805 CEP97Q8IW35 865 aa11.28□□□□□ -0.6
SPTBN1-202ENST00000356805 GPR151Q8TDV0 419 aa11.28□□□□□ -0.6
SPTBN1-202ENST00000356805 ITM2AO43736 263 aa11.28□□□□□ -0.6
SPTBN1-202ENST00000356805 OAZ2O95190 189 aa11.28□□□□□ -0.6
SPTBN1-202ENST00000356805 SPAM1P38567 509 aa11.28□□□□□ -0.6
SPTBN1-202ENST00000356805 PNLIPRP1P54315 467 aa11.28□□□□□ -0.6
SPTBN1-202ENST00000356805 CAV3P56539 151 aa11.28□□□□□ -0.6
SPTBN1-202ENST00000356805 IQCCQ4KMZ1 466 aa11.28□□□□□ -0.6
SPTBN1-202ENST00000356805 LINC00471Q8N535 108 aa11.28□□□□□ -0.6
SPTBN1-202ENST00000356805 NDRG1Q92597 394 aaKnown RBP11.28□□□□□ -0.6
SPTBN1-202ENST00000356805 ITPAQ9BY32 194 aa11.28□□□□□ -0.6
SPTBN1-202ENST00000356805 DPAGT1Q9H3H5 408 aa11.28□□□□□ -0.6
SPTBN1-202ENST00000356805 CNTNAP4Q9C0A0 1308 aa11.28□□□□□ -0.6
SPTBN1-202ENST00000356805 EIF1AYO14602 144 aaKnown RBP11.28□□□□□ -0.6
SPTBN1-202ENST00000356805 LRP8Q14114 963 aa11.28□□□□□ -0.6
SPTBN1-202ENST00000356805 PHF19Q5T6S3 580 aa11.28□□□□□ -0.6
SPTBN1-202ENST00000356805 CAND1Q86VP6 1230 aaKnown RBP11.28□□□□□ -0.6
SPTBN1-202ENST00000356805 SLC22A16Q86VW1 577 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms